From 1b5c73d20d3a1f75794608d56e5ae58c1bb0b4f9 Mon Sep 17 00:00:00 2001 From: Tomas Bylund Date: Fri, 20 Jan 2023 16:56:33 +0100 Subject: [PATCH 1/3] Clarified the role of in the docs --- docs/ctapipe_api/tools/index.rst | 4 +- docs/examples/Tools.ipynb | 10547 ++++++++++++++++++++++++++++- 2 files changed, 10459 insertions(+), 92 deletions(-) diff --git a/docs/ctapipe_api/tools/index.rst b/docs/ctapipe_api/tools/index.rst index 62751fcb8a0..dfbfde9f367 100644 --- a/docs/ctapipe_api/tools/index.rst +++ b/docs/ctapipe_api/tools/index.rst @@ -54,8 +54,8 @@ To create a new command-line Tool, follow the following procedure: 1. make a subclass of `ctapipe.core.Tool` 2. define any user-configurable parameters of the tool -3. register any configurable `ctapipe.core.Component` lasses - that you will use with the Tool via its ``classes`` attribute +3. register *all* configurable `ctapipe.core.Component` classes + that you want to be configured via the the Tool via its ``classes`` attribute 4. use the ``aliases`` attribute to promote any parameters from one of the sub-Components to a high-level a command-line parameter (they can still be specified using the advanced command-line command diff --git a/docs/examples/Tools.ipynb b/docs/examples/Tools.ipynb index eb3ac44c5ad..858392899fa 100644 --- a/docs/examples/Tools.ipynb +++ b/docs/examples/Tools.ipynb @@ -9,8 +9,16 @@ }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, + "execution_count": 1, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:47:32.556431Z", + "iopub.status.busy": "2023-01-20T15:47:32.556200Z", + "iopub.status.idle": "2023-01-20T15:47:33.122371Z", + "shell.execute_reply": "2023-01-20T15:47:33.121771Z", + "shell.execute_reply.started": "2023-01-20T15:47:32.556391Z" + } + }, "outputs": [], "source": [ "from ctapipe.core import Tool, Component, TelescopeComponent\n", @@ -33,8 +41,16 @@ }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, + "execution_count": 2, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:47:33.123236Z", + "iopub.status.busy": "2023-01-20T15:47:33.123060Z", + "iopub.status.idle": "2023-01-20T15:47:33.126138Z", + "shell.execute_reply": "2023-01-20T15:47:33.125668Z", + "shell.execute_reply.started": "2023-01-20T15:47:33.123222Z" + } + }, "outputs": [], "source": [ "GAMMA_FILE = get_dataset_path(\"gamma_prod5.simtel.zst\")" @@ -58,8 +74,17 @@ }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, + "execution_count": 3, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:47:34.858924Z", + "iopub.status.busy": "2023-01-20T15:47:34.858716Z", + "iopub.status.idle": "2023-01-20T15:47:34.865470Z", + "shell.execute_reply": "2023-01-20T15:47:34.864955Z", + "shell.execute_reply.started": "2023-01-20T15:47:34.858910Z" + }, + "tags": [] + }, "outputs": [], "source": [ "class MyComponent(Component):\n", @@ -73,6 +98,8 @@ "\n", "# in order to have 2 of the same components at once\n", "class SecondaryMyComponent(MyComponent):\n", + " \"\"\"A second component\"\"\"\n", + "\n", " pass\n", "\n", "\n", @@ -111,18 +138,112 @@ }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], + "execution_count": 4, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:47:35.682898Z", + "iopub.status.busy": "2023-01-20T15:47:35.682653Z", + "iopub.status.idle": "2023-01-20T15:47:35.724239Z", + "shell.execute_reply": "2023-01-20T15:47:35.723618Z", + "shell.execute_reply.started": "2023-01-20T15:47:35.682883Z" + }, + "tags": [] + }, + "outputs": [ + { + "data": { + "text/html": [ + "
\n", + "MyComponent\n", + "

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A Component that does stuff

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value-1Value to use (default: -1)
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" + ], + "text/plain": [ + "<__main__.MyComponent at 0x7f1f8eaf7970>" + ] + }, + "execution_count": 4, + "metadata": {}, + "output_type": "execute_result" + } + ], "source": [ "MyComponent()" ] }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], + "execution_count": 5, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:47:36.570725Z", + "iopub.status.busy": "2023-01-20T15:47:36.570473Z", + "iopub.status.idle": "2023-01-20T15:47:36.578834Z", + "shell.execute_reply": "2023-01-20T15:47:36.578172Z", + "shell.execute_reply.started": "2023-01-20T15:47:36.570709Z" + } + }, + "outputs": [ + { + "name": "stderr", + "output_type": "stream", + "text": [ + "Outfile was changed to '{'name': 'outfile', 'old': traitlets.Undefined, 'new': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/out.foo'), 'owner': <__main__.AdvancedComponent object at 0x7f1f8e3d3e20>, 'type': 'change'}'\n" + ] + }, + { + "data": { + "text/html": [ + "
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An advanced technique

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infile/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/test.fooinput file name (default: traitlets.Undefined)
outfile/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/out.foooutput file name (default: traitlets.Undefined)
value1-1Value to use (default: -1)
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" + ], + "text/plain": [ + "<__main__.AdvancedComponent at 0x7f1f8e3d3e20>" + ] + }, + "execution_count": 5, + "metadata": {}, + "output_type": "execute_result" + } + ], "source": [ "AdvancedComponent(infile=\"test.foo\", outfile=\"out.foo\")" ] @@ -136,9 +257,34 @@ }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], + "execution_count": 6, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:47:37.554924Z", + "iopub.status.busy": "2023-01-20T15:47:37.554678Z", + "iopub.status.idle": "2023-01-20T15:47:40.054296Z", + "shell.execute_reply": "2023-01-20T15:47:40.053748Z", + "shell.execute_reply.started": "2023-01-20T15:47:37.554908Z" + } + }, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "Subarray : MonteCarloArray\n", + "Num Tels : 180\n", + "Footprint: 4.92 km2\n", + "\n", + " Type Count Tel IDs \n", + "----------------- ----- ---------------\n", + " SST_ASTRI_CHEC 120 30-99,131-180 \n", + " LST_LST_LSTCam 4 1-4 \n", + "MST_MST_NectarCam 28 100-124,128-130\n", + " MST_MST_FlashCam 28 5-29,125-127 \n" + ] + } + ], "source": [ "from ctapipe.instrument import SubarrayDescription, TelescopeDescription\n", "\n", @@ -148,9 +294,49 @@ }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], + "execution_count": 7, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:47:40.055315Z", + "iopub.status.busy": "2023-01-20T15:47:40.055114Z", + "iopub.status.idle": "2023-01-20T15:47:40.062742Z", + "shell.execute_reply": "2023-01-20T15:47:40.062302Z", + "shell.execute_reply.started": "2023-01-20T15:47:40.055294Z" + } + }, + "outputs": [ + { + "data": { + "text/html": [ + "
\n", + "TelescopeWiseComponent\n", + "

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a component that contains parameters that are per-telescope configurable

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param[('type', '*', 5.0)]Something configurable with telescope patterns. (default: traitlets.Undefined)
\n", + "
" + ], + "text/plain": [ + "<__main__.TelescopeWiseComponent at 0x7f1f80bebd90>" + ] + }, + "execution_count": 7, + "metadata": {}, + "output_type": "execute_result" + } + ], "source": [ "TelescopeWiseComponent(subarray=subarray)" ] @@ -178,13 +364,22 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "## Now create an executable Tool that contains the Components" + "## Now create an executable Tool that contains the Components\n", + "Note that all the components we wish to be configured via the tool must be added to the `classes` attribute." ] }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, + "execution_count": 8, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:47:40.063435Z", + "iopub.status.busy": "2023-01-20T15:47:40.063269Z", + "iopub.status.idle": "2023-01-20T15:47:40.070192Z", + "shell.execute_reply": "2023-01-20T15:47:40.069807Z", + "shell.execute_reply.started": "2023-01-20T15:47:40.063420Z" + } + }, "outputs": [], "source": [ "class MyTool(Tool):\n", @@ -241,9 +436,134 @@ }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], + "execution_count": 9, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:47:41.229847Z", + "iopub.status.busy": "2023-01-20T15:47:41.229546Z", + "iopub.status.idle": "2023-01-20T15:47:41.237595Z", + "shell.execute_reply": "2023-01-20T15:47:41.237109Z", + "shell.execute_reply.started": "2023-01-20T15:47:41.229817Z" + }, + "tags": [] + }, + "outputs": [ + { + "data": { + "text/html": [ + "MyTool\n", + "

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do some things and stuff

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config_files[] (default: traitlets.Undefined)
iterations5Number of times to run (default: 5)
log_config{} (default: traitlets.Undefined)
log_datefmt%Y-%m-%d %H:%M:%SThe date format used by logging formatters for %(asctime)s (default: %Y-%m-%d %H:%M:%S)
log_fileNoneFilename for the log (default: None)
log_file_levelINFOLogging Level for File Logging (default: INFO)
log_format[%(name)s]%(highlevel)s %(message)sThe Logging format template (default: [%(name)s]%(highlevel)s %(message)s)
log_level30Set the log level by value or name. (default: 30)
logging_config{}\n", + " Configure additional log handlers.\n", + "\n", + " The default stderr logs handler is configured by the\n", + " log_level, log_datefmt and log_format settings.\n", + "\n", + " This configuration can be used to configure additional handlers\n", + " (e.g. to output the log to a file) or for finer control over the\n", + " default handlers.\n", + "\n", + " If provided this should be a logging configuration dictionary, for\n", + " more information see:\n", + " https://docs.python.org/3/library/logging.config.html#logging-config-dictschema\n", + "\n", + " This dictionary is merged with the base logging configuration which\n", + " defines the following:\n", + "\n", + " * A logging formatter intended for interactive use called\n", + " ``console``.\n", + " * A logging handler that writes to stderr called\n", + " ``console`` which uses the formatter ``console``.\n", + " * A logger with the name of this application set to ``DEBUG``\n", + " level.\n", + "\n", + " This example adds a new handler that writes to a file:\n", + "\n", + " .. code-block:: python\n", + "\n", + " c.Application.logging_config = {\n", + " 'handlers': {\n", + " 'file': {\n", + " 'class': 'logging.FileHandler',\n", + " 'level': 'DEBUG',\n", + " 'filename': '',\n", + " }\n", + " },\n", + " 'loggers': {\n", + " '': {\n", + " 'level': 'DEBUG',\n", + " # NOTE: if you don't list the default \"console\"\n", + " # handler here then it will be disabled\n", + " 'handlers': ['console', 'file'],\n", + " },\n", + " }\n", + " }\n", + "\n", + " (default: traitlets.Undefined)
provenance_log/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/mytool.provenance.log (default: traitlets.Undefined)
quietFalse (default: False)
show_configFalseInstead of starting the Application, dump configuration to stdout (default: False)
show_config_jsonFalseInstead of starting the Application, dump configuration to stdout (as JSON) (default: False)
\n", + "

Components:\n", + "MyTool, MyComponent, AdvancedComponent, SecondaryMyComponent, TelescopeWiseComponent\n", + "

\n", + "" + ], + "text/plain": [ + "<__main__.MyTool at 0x7f1f80d138e0>" + ] + }, + "execution_count": 9, + "metadata": {}, + "output_type": "execute_result" + } + ], "source": [ "tool = MyTool()\n", "tool" @@ -251,9 +571,83 @@ }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], + "execution_count": 10, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:47:44.970721Z", + "iopub.status.busy": "2023-01-20T15:47:44.970493Z", + "iopub.status.idle": "2023-01-20T15:47:44.975057Z", + "shell.execute_reply": "2023-01-20T15:47:44.974651Z", + "shell.execute_reply.started": "2023-01-20T15:47:44.970708Z" + } + }, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "do some things and stuff\n", + "\n", + "Options\n", + "=======\n", + "The options below are convenience aliases to configurable class-options,\n", + "as listed in the \"Equivalent to\" description-line of the aliases.\n", + "To see all configurable class-options for some , use:\n", + " --help-all\n", + "\n", + "--debug\n", + " Set log-level to debug, for the most verbose logging.\n", + " Equivalent to: [--Application.log_level=10]\n", + "--show-config\n", + " Show the application's configuration (human-readable format)\n", + " Equivalent to: [--Application.show_config=True]\n", + "--show-config-json\n", + " Show the application's configuration (json format)\n", + " Equivalent to: [--Application.show_config_json=True]\n", + "-q, --quiet\n", + " Disable console logging.\n", + " Equivalent to: [--Tool.quiet=True]\n", + "-v, --verbose\n", + " Set log level to DEBUG\n", + " Equivalent to: [--Tool.log_level=DEBUG]\n", + "-c, --config=...\n", + " Default: []\n", + " Equivalent to: [--Tool.config_files]\n", + "--log-level=\n", + " Set the log level by value or name.\n", + " Choices: any of [0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL']\n", + " Default: 30\n", + " Equivalent to: [--Tool.log_level]\n", + "-l, --log-file=\n", + " Filename for the log\n", + " Default: None\n", + " Equivalent to: [--Tool.log_file]\n", + "--log-file-level=\n", + " Logging Level for File Logging\n", + " Choices: any of [0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL']\n", + " Default: 'INFO'\n", + " Equivalent to: [--Tool.log_file_level]\n", + "--provenance-log=\n", + " Default: traitlets.Undefined\n", + " Equivalent to: [--Tool.provenance_log]\n", + "--infile=\n", + " input file name\n", + " Default: traitlets.Undefined\n", + " Equivalent to: [--AdvancedComponent.infile]\n", + "--outfile=\n", + " output file name\n", + " Default: traitlets.Undefined\n", + " Equivalent to: [--AdvancedComponent.outfile]\n", + "--iterations=\n", + " Number of times to run\n", + " Default: 5\n", + " Equivalent to: [--MyTool.iterations]\n", + "\n", + "To see all available configurables, use `--help-all`.\n", + "\n" + ] + } + ], "source": [ "tool.print_help()" ] @@ -267,11 +661,325 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 11, "metadata": { - "scrolled": false + "execution": { + "iopub.execute_input": "2023-01-20T15:47:45.954726Z", + "iopub.status.busy": "2023-01-20T15:47:45.954553Z", + "iopub.status.idle": "2023-01-20T15:47:45.961296Z", + "shell.execute_reply": "2023-01-20T15:47:45.960706Z", + "shell.execute_reply.started": "2023-01-20T15:47:45.954713Z" + }, + "scrolled": true, + "tags": [] }, - "outputs": [], + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "do some things and stuff\n", + "\n", + "Options\n", + "=======\n", + "The options below are convenience aliases to configurable class-options,\n", + "as listed in the \"Equivalent to\" description-line of the aliases.\n", + "To see all configurable class-options for some , use:\n", + " --help-all\n", + "\n", + "--debug\n", + " Set log-level to debug, for the most verbose logging.\n", + " Equivalent to: [--Application.log_level=10]\n", + "--show-config\n", + " Show the application's configuration (human-readable format)\n", + " Equivalent to: [--Application.show_config=True]\n", + "--show-config-json\n", + " Show the application's configuration (json format)\n", + " Equivalent to: [--Application.show_config_json=True]\n", + "-q, --quiet\n", + " Disable console logging.\n", + " Equivalent to: [--Tool.quiet=True]\n", + "-v, --verbose\n", + " Set log level to DEBUG\n", + " Equivalent to: [--Tool.log_level=DEBUG]\n", + "-c, --config=...\n", + " Default: []\n", + " Equivalent to: [--Tool.config_files]\n", + "--log-level=\n", + " Set the log level by value or name.\n", + " Choices: any of [0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL']\n", + " Default: 30\n", + " Equivalent to: [--Tool.log_level]\n", + "-l, --log-file=\n", + " Filename for the log\n", + " Default: None\n", + " Equivalent to: [--Tool.log_file]\n", + "--log-file-level=\n", + " Logging Level for File Logging\n", + " Choices: any of [0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL']\n", + " Default: 'INFO'\n", + " Equivalent to: [--Tool.log_file_level]\n", + "--provenance-log=\n", + " Default: traitlets.Undefined\n", + " Equivalent to: [--Tool.provenance_log]\n", + "--infile=\n", + " input file name\n", + " Default: traitlets.Undefined\n", + " Equivalent to: [--AdvancedComponent.infile]\n", + "--outfile=\n", + " output file name\n", + " Default: traitlets.Undefined\n", + " Equivalent to: [--AdvancedComponent.outfile]\n", + "--iterations=\n", + " Number of times to run\n", + " Default: 5\n", + " Equivalent to: [--MyTool.iterations]\n", + "\n", + "Class options\n", + "=============\n", + "The command-line option below sets the respective configurable class-parameter:\n", + " --Class.parameter=value\n", + "This line is evaluated in Python, so simple expressions are allowed.\n", + "For instance, to set `C.a=[0,1,2]`, you may type this:\n", + " --C.a='range(3)'\n", + "\n", + "Application(SingletonConfigurable) options\n", + "------------------------------------------\n", + "--Application.log_datefmt=\n", + " The date format used by logging formatters for %(asctime)s\n", + " Default: '%Y-%m-%d %H:%M:%S'\n", + "--Application.log_format=\n", + " The Logging format template\n", + " Default: '[%(name)s]%(highlevel)s %(message)s'\n", + "--Application.log_level=\n", + " Set the log level by value or name.\n", + " Choices: any of [0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL']\n", + " Default: 30\n", + "--Application.logging_config==...\n", + " Configure additional log handlers.\n", + " The default stderr logs handler is configured by the log_level, log_datefmt\n", + " and log_format settings.\n", + " This configuration can be used to configure additional handlers (e.g. to\n", + " output the log to a file) or for finer control over the default handlers.\n", + " If provided this should be a logging configuration dictionary, for more\n", + " information see:\n", + " https://docs.python.org/3/library/logging.config.html#logging-config-\n", + " dictschema\n", + " This dictionary is merged with the base logging configuration which defines\n", + " the following:\n", + " * A logging formatter intended for interactive use called\n", + " ``console``.\n", + " * A logging handler that writes to stderr called\n", + " ``console`` which uses the formatter ``console``.\n", + " * A logger with the name of this application set to ``DEBUG``\n", + " level.\n", + " This example adds a new handler that writes to a file:\n", + " .. code-block:: python\n", + " c.Application.logging_config = {\n", + " 'handlers': {\n", + " 'file': {\n", + " 'class': 'logging.FileHandler',\n", + " 'level': 'DEBUG',\n", + " 'filename': '',\n", + " }\n", + " },\n", + " 'loggers': {\n", + " '': {\n", + " 'level': 'DEBUG',\n", + " # NOTE: if you don't list the default \"console\"\n", + " # handler here then it will be disabled\n", + " 'handlers': ['console', 'file'],\n", + " },\n", + " }\n", + " }\n", + " Default: {}\n", + "--Application.show_config=\n", + " Instead of starting the Application, dump configuration to stdout\n", + " Default: False\n", + "--Application.show_config_json=\n", + " Instead of starting the Application, dump configuration to stdout (as JSON)\n", + " Default: False\n", + "\n", + "Tool(Application) options\n", + "-------------------------\n", + "--Tool.config_files=...\n", + " Default: []\n", + "--Tool.log_config==...\n", + " Default: {}\n", + "--Tool.log_datefmt=\n", + " The date format used by logging formatters for %(asctime)s\n", + " Default: '%Y-%m-%d %H:%M:%S'\n", + "--Tool.log_file=\n", + " Filename for the log\n", + " Default: None\n", + "--Tool.log_file_level=\n", + " Logging Level for File Logging\n", + " Choices: any of [0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL']\n", + " Default: 'INFO'\n", + "--Tool.log_format=\n", + " The Logging format template\n", + " Default: '[%(name)s]%(highlevel)s %(message)s'\n", + "--Tool.log_level=\n", + " Set the log level by value or name.\n", + " Choices: any of [0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL']\n", + " Default: 30\n", + "--Tool.logging_config==...\n", + " Configure additional log handlers.\n", + " The default stderr logs handler is configured by the log_level, log_datefmt\n", + " and log_format settings.\n", + " This configuration can be used to configure additional handlers (e.g. to\n", + " output the log to a file) or for finer control over the default handlers.\n", + " If provided this should be a logging configuration dictionary, for more\n", + " information see:\n", + " https://docs.python.org/3/library/logging.config.html#logging-config-\n", + " dictschema\n", + " This dictionary is merged with the base logging configuration which defines\n", + " the following:\n", + " * A logging formatter intended for interactive use called\n", + " ``console``.\n", + " * A logging handler that writes to stderr called\n", + " ``console`` which uses the formatter ``console``.\n", + " * A logger with the name of this application set to ``DEBUG``\n", + " level.\n", + " This example adds a new handler that writes to a file:\n", + " .. code-block:: python\n", + " c.Application.logging_config = {\n", + " 'handlers': {\n", + " 'file': {\n", + " 'class': 'logging.FileHandler',\n", + " 'level': 'DEBUG',\n", + " 'filename': '',\n", + " }\n", + " },\n", + " 'loggers': {\n", + " '': {\n", + " 'level': 'DEBUG',\n", + " # NOTE: if you don't list the default \"console\"\n", + " # handler here then it will be disabled\n", + " 'handlers': ['console', 'file'],\n", + " },\n", + " }\n", + " }\n", + " Default: {}\n", + "--Tool.provenance_log=\n", + " Default: traitlets.Undefined\n", + "--Tool.quiet=\n", + " Default: False\n", + "--Tool.show_config=\n", + " Instead of starting the Application, dump configuration to stdout\n", + " Default: False\n", + "--Tool.show_config_json=\n", + " Instead of starting the Application, dump configuration to stdout (as JSON)\n", + " Default: False\n", + "\n", + "MyTool(Tool) options\n", + "--------------------\n", + "--MyTool.config_files=...\n", + " Default: []\n", + "--MyTool.iterations=\n", + " Number of times to run\n", + " Default: 5\n", + "--MyTool.log_config==...\n", + " Default: {}\n", + "--MyTool.log_datefmt=\n", + " The date format used by logging formatters for %(asctime)s\n", + " Default: '%Y-%m-%d %H:%M:%S'\n", + "--MyTool.log_file=\n", + " Filename for the log\n", + " Default: None\n", + "--MyTool.log_file_level=\n", + " Logging Level for File Logging\n", + " Choices: any of [0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL']\n", + " Default: 'INFO'\n", + "--MyTool.log_format=\n", + " The Logging format template\n", + " Default: '[%(name)s]%(highlevel)s %(message)s'\n", + "--MyTool.log_level=\n", + " Set the log level by value or name.\n", + " Choices: any of [0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL']\n", + " Default: 30\n", + "--MyTool.logging_config==...\n", + " Configure additional log handlers.\n", + " The default stderr logs handler is configured by the log_level, log_datefmt\n", + " and log_format settings.\n", + " This configuration can be used to configure additional handlers (e.g. to\n", + " output the log to a file) or for finer control over the default handlers.\n", + " If provided this should be a logging configuration dictionary, for more\n", + " information see:\n", + " https://docs.python.org/3/library/logging.config.html#logging-config-\n", + " dictschema\n", + " This dictionary is merged with the base logging configuration which defines\n", + " the following:\n", + " * A logging formatter intended for interactive use called\n", + " ``console``.\n", + " * A logging handler that writes to stderr called\n", + " ``console`` which uses the formatter ``console``.\n", + " * A logger with the name of this application set to ``DEBUG``\n", + " level.\n", + " This example adds a new handler that writes to a file:\n", + " .. code-block:: python\n", + " c.Application.logging_config = {\n", + " 'handlers': {\n", + " 'file': {\n", + " 'class': 'logging.FileHandler',\n", + " 'level': 'DEBUG',\n", + " 'filename': '',\n", + " }\n", + " },\n", + " 'loggers': {\n", + " '': {\n", + " 'level': 'DEBUG',\n", + " # NOTE: if you don't list the default \"console\"\n", + " # handler here then it will be disabled\n", + " 'handlers': ['console', 'file'],\n", + " },\n", + " }\n", + " }\n", + " Default: {}\n", + "--MyTool.provenance_log=\n", + " Default: traitlets.Undefined\n", + "--MyTool.quiet=\n", + " Default: False\n", + "--MyTool.show_config=\n", + " Instead of starting the Application, dump configuration to stdout\n", + " Default: False\n", + "--MyTool.show_config_json=\n", + " Instead of starting the Application, dump configuration to stdout (as JSON)\n", + " Default: False\n", + "\n", + "MyComponent(Component) options\n", + "------------------------------\n", + "--MyComponent.value=\n", + " Value to use\n", + " Default: -1\n", + "\n", + "AdvancedComponent(Component) options\n", + "------------------------------------\n", + "--AdvancedComponent.infile=\n", + " input file name\n", + " Default: traitlets.Undefined\n", + "--AdvancedComponent.outfile=\n", + " output file name\n", + " Default: traitlets.Undefined\n", + "--AdvancedComponent.value1=\n", + " Value to use\n", + " Default: -1\n", + "\n", + "SecondaryMyComponent(MyComponent) options\n", + "-----------------------------------------\n", + "--SecondaryMyComponent.value=\n", + " Value to use\n", + " Default: -1\n", + "\n", + "TelescopeWiseComponent(TelescopeComponent) options\n", + "--------------------------------------------------\n", + "--TelescopeWiseComponent.param=...\n", + " Something configurable with telescope patterns.\n", + " Default: [('type', '*', 5.0)]\n", + "\n" + ] + } + ], "source": [ "tool.print_help(classes=True)" ] @@ -294,11 +1002,27 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 12, "metadata": { - "scrolled": false + "execution": { + "iopub.execute_input": "2023-01-20T15:47:52.580003Z", + "iopub.status.busy": "2023-01-20T15:47:52.579625Z", + "iopub.status.idle": "2023-01-20T15:47:53.115772Z", + "shell.execute_reply": "2023-01-20T15:47:53.115222Z", + "shell.execute_reply.started": "2023-01-20T15:47:52.579981Z" + }, + "tags": [] }, - "outputs": [], + "outputs": [ + { + "name": "stderr", + "output_type": "stream", + "text": [ + "2023-01-20 16:47:52,602 \u001b[1;33mWARNING\u001b[0m [__main__.mytool.AdvancedComponent] (3049709041.on_outfile_changed): Outfile was changed to '{'name': 'outfile', 'old': traitlets.Undefined, 'new': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/out.csv'), 'owner': <__main__.AdvancedComponent object at 0x7f1f80d00c10>, 'type': 'change'}'\n", + "2023-01-20 16:47:53,105 \u001b[1;33mWARNING\u001b[0m [__main__.mytool] (462504653.finish): Shutting down.\n" + ] + } + ], "source": [ "try:\n", " tool.run(argv=[\"--infile\", str(GAMMA_FILE), \"--outfile\", \"out.csv\"])\n", @@ -308,9 +1032,36 @@ }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], + "execution_count": 13, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:47:53.116897Z", + "iopub.status.busy": "2023-01-20T15:47:53.116728Z", + "iopub.status.idle": "2023-01-20T15:47:53.460013Z", + "shell.execute_reply": "2023-01-20T15:47:53.459533Z", + "shell.execute_reply.started": "2023-01-20T15:47:53.116881Z" + } + }, + "outputs": [ + { + "name": "stderr", + "output_type": "stream", + "text": [ + "2023-01-20 16:47:53,123 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.initialize): Loading config from '[]'\n", + "2023-01-20 16:47:53,125 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.initialize): ctapipe version 0.17.1.dev457+ga222c281.d20230120\n", + "2023-01-20 16:47:53,125 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.run): Starting: mytool\n", + "2023-01-20 16:47:53,146 \u001b[1;33mWARNING\u001b[0m [__main__.mytool.AdvancedComponent] (3049709041.on_outfile_changed): Outfile was changed to '{'name': 'outfile', 'old': traitlets.Undefined, 'new': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/out.csv'), 'owner': <__main__.AdvancedComponent object at 0x7f1f80d009d0>, 'type': 'change'}'\n", + "2023-01-20 16:47:53,148 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (462504653.start): Performing 3 iterations...\n", + "2023-01-20 16:47:53,149 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (462504653.start): ITERATION 0\n", + "2023-01-20 16:47:53,249 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (462504653.start): ITERATION 1\n", + "2023-01-20 16:47:53,350 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (462504653.start): ITERATION 2\n", + "2023-01-20 16:47:53,451 \u001b[1;33mWARNING\u001b[0m [__main__.mytool] (462504653.finish): Shutting down.\n", + "2023-01-20 16:47:53,452 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.run): Finished: mytool\n", + "2023-01-20 16:47:53,453 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.write_provenance): Output: \n", + "2023-01-20 16:47:53,454 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.write_provenance): Output: \n" + ] + } + ], "source": [ "tool.log_format = \"%(asctime)s : %(levelname)s [%(name)s %(funcName)s] %(message)s\"\n", "\n", @@ -341,11 +1092,3330 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 14, "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:47:54.699074Z", + "iopub.status.busy": "2023-01-20T15:47:54.698868Z", + "iopub.status.idle": "2023-01-20T15:47:55.047408Z", + "shell.execute_reply": "2023-01-20T15:47:55.047027Z", + "shell.execute_reply.started": "2023-01-20T15:47:54.699059Z" + }, "scrolled": true }, - "outputs": [], + "outputs": [ + { + "name": "stderr", + "output_type": "stream", + "text": [ + "2023-01-20 16:47:54,704 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.initialize): Loading config from '[]'\n", + "2023-01-20 16:47:54,707 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.initialize): ctapipe version 0.17.1.dev457+ga222c281.d20230120\n", + "2023-01-20 16:47:54,708 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.run): Starting: mytool\n", + "2023-01-20 16:47:54,725 \u001b[1;33mWARNING\u001b[0m [__main__.mytool.AdvancedComponent] (3049709041.on_outfile_changed): Outfile was changed to '{'name': 'outfile', 'old': traitlets.Undefined, 'new': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/out.csv'), 'owner': <__main__.AdvancedComponent object at 0x7f1f80cf6be0>, 'type': 'change'}'\n", + "2023-01-20 16:47:54,726 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool] (tool.run): CONFIG: {'MyTool': {'config_files': [], 'iterations': 3, 'log_config': {}, 'log_datefmt': '%Y-%m-%d %H:%M:%S', 'log_file': None, 'log_file_level': 'INFO', 'log_format': '%(asctime)s : %(levelname)s [%(name)s %(funcName)s] %(message)s', 'log_level': 10, 'logging_config': {}, 'provenance_log': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/mytool.provenance.log'), 'quiet': False, 'show_config': False, 'show_config_json': False, 'MyComponent': {'value': -1}, 'SecondaryMyComponent': {'value': -1}, 'TelescopeWiseComponent': {'param': [('type', '*', 5.0)]}, 'AdvancedComponent': {'infile': PosixPath('/home/tb273079/.cache/ctapipe/cccta-dataserver.in2p3.fr/data/ctapipe-test-data/v1.1.0/gamma_prod5.simtel.zst'), 'outfile': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/out.csv'), 'value1': -1, 'MyComponent': {'value': -1}}}}\n", + "2023-01-20 16:47:54,727 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (462504653.start): Performing 3 iterations...\n", + "2023-01-20 16:47:54,727 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (462504653.start): ITERATION 0\n", + "2023-01-20 16:47:54,728 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.MyComponent] (3049709041.do_thing): Did thing\n", + "2023-01-20 16:47:54,728 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.SecondaryMyComponent] (3049709041.do_thing): Did thing\n", + "2023-01-20 16:47:54,829 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (462504653.start): ITERATION 1\n", + "2023-01-20 16:47:54,830 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.MyComponent] (3049709041.do_thing): Did thing\n", + "2023-01-20 16:47:54,830 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.SecondaryMyComponent] (3049709041.do_thing): Did thing\n", + "2023-01-20 16:47:54,931 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (462504653.start): ITERATION 2\n", + "2023-01-20 16:47:54,932 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.MyComponent] (3049709041.do_thing): Did thing\n", + "2023-01-20 16:47:54,932 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.SecondaryMyComponent] (3049709041.do_thing): Did thing\n", + "2023-01-20 16:47:55,033 \u001b[1;33mWARNING\u001b[0m [__main__.mytool] (462504653.finish): Shutting down.\n", + "2023-01-20 16:47:55,033 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.run): Finished: mytool\n", + "2023-01-20 16:47:55,035 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.write_provenance): Output: \n", + "2023-01-20 16:47:55,036 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.write_provenance): Output: \n", + "2023-01-20 16:47:55,036 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.write_provenance): Output: \n", + "2023-01-20 16:47:55,040 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool] (tool.write_provenance): PROVENANCE: '[\n", + " {\n", + " \"activity_name\": \"mytool\",\n", + " \"activity_uuid\": \"21472903-b1d8-4648-97ae-83284fc2c11c\",\n", + " \"start\": {\n", + " \"time_utc\": \"2023-01-20T15:47:52.586\"\n", + " },\n", + " \"stop\": {\n", + " \"time_utc\": \"2023-01-20T15:47:53.106\"\n", + " },\n", + " \"system\": {\n", + " \"ctapipe_version\": \"0.17.1.dev457+ga222c281.d20230120\",\n", + " \"ctapipe_resources_version\": \"not installed\",\n", + " \"eventio_version\": \"1.11.0\",\n", + " \"ctapipe_svc_path\": null,\n", + " \"executable\": \"/local/home/tb273079/miniconda3/envs/cta-dev/bin/python\",\n", + " \"platform\": {\n", + " \"architecture_bits\": \"64bit\",\n", + " \"architecture_linkage\": \"ELF\",\n", + " \"machine\": \"x86_64\",\n", + " \"processor\": \"x86_64\",\n", + " \"node\": \"dappcz150.extra.cea.fr\",\n", + " \"version\": \"#62-Ubuntu SMP Tue Nov 22 19:54:14 UTC 2022\",\n", + " \"system\": \"Linux\",\n", + " \"release\": \"5.15.0-56-generic\",\n", + " \"libcver\": [\n", + " \"glibc\",\n", + " \"2.35\"\n", + " ],\n", + " \"n_cpus\": 12,\n", + " \"boot_time\": \"2023-01-10T12:23:16.000\"\n", + " },\n", + " \"python\": {\n", + " \"version_string\": \"3.9.15 | packaged by conda-forge | (main, Nov 22 2022, 15:55:03) \\n[GCC 10.4.0]\",\n", + " \"version\": [\n", + " \"3\",\n", + " \"9\",\n", + " \"15\"\n", + " ],\n", + " \"compiler\": \"GCC 10.4.0\",\n", + " \"implementation\": \"CPython\",\n", + " \"packages\": [\n", + " {\n", + " \"name\": \"Babel\",\n", + " \"version\": \"2.11.0\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"Cython\",\n", + " \"version\": \"0.29.32\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"Jinja2\",\n", + " \"version\": \"3.0.3\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"MarkupSafe\",\n", + " \"version\": \"2.1.1\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"Pillow\",\n", + " \"version\": \"9.2.0\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"PyQt5\",\n", + " \"version\": \"5.15.7\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"PyQt5-sip\",\n", + " \"version\": \"12.11.0\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"PySocks\",\n", + " \"version\": \"1.7.1\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"PyYAML\",\n", + " \"version\": \"6.0\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"Pygments\",\n", + " \"version\": \"2.13.0\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"Pympler\",\n", + " \"version\": \"0.9\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"QtPy\",\n", + " \"version\": \"2.3.0\",\n", + " \"path\": 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},\n", + " {\n", + " \"name\": \"wcwidth\",\n", + " \"version\": \"0.2.5\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"webencodings\",\n", + " \"version\": \"0.5.1\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"websocket-client\",\n", + " \"version\": \"1.4.2\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"wheel\",\n", + " \"version\": \"0.38.4\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"widgetsnbextension\",\n", + " \"version\": \"4.0.3\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"wrapt\",\n", + " \"version\": \"1.14.1\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"zipp\",\n", + " \"version\": \"3.11.0\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"zstandard\",\n", + " \"version\": \"0.19.0\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " }\n", + " ]\n", + " },\n", + " \"environment\": {\n", + " \"CONDA_DEFAULT_ENV\": \"cta-dev\",\n", + " \"CONDA_PREFIX\": \"/local/home/tb273079/miniconda3/envs/cta-dev\",\n", + " \"CONDA_PYTHON_EXE\": \"/local/home/tb273079/miniconda3/bin/python\",\n", + " \"CONDA_EXE\": \"/local/home/tb273079/miniconda3/bin/conda\",\n", + " \"CONDA_PROMPT_MODIFIER\": \"(cta-dev) \",\n", + " \"CONDA_SHLVL\": \"1\",\n", + " \"PATH\": \"/local/home/tb273079/miniconda3/envs/cta-dev/bin:/local/home/tb273079/miniconda3/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin:/opt/puppetlabs/bin\",\n", + " \"LD_LIBRARY_PATH\": null,\n", + " \"DYLD_LIBRARY_PATH\": null,\n", + " \"USER\": \"tb273079\",\n", + " \"HOME\": \"/home/tb273079\",\n", + " \"SHELL\": \"/bin/bash\"\n", + " },\n", + " \"arguments\": [\n", + " \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages/ipykernel_launcher.py\",\n", + " \"-f\",\n", + " \"/home/tb273079/.local/share/jupyter/runtime/kernel-dfaf2061-1824-4548-a293-6d9d4420f65d.json\"\n", + " ],\n", + " \"start_time_utc\": \"2023-01-20T15:47:54.723\"\n", + " },\n", + " \"input\": [],\n", + " \"output\": [],\n", + " \"config\": {\n", + " \"MyTool\": {\n", + " \"config_files\": [],\n", + " \"iterations\": 3,\n", + " \"log_config\": {},\n", + " \"log_datefmt\": \"%Y-%m-%d %H:%M:%S\",\n", + " \"log_file\": null,\n", + " \"log_file_level\": \"INFO\",\n", + " \"log_format\": \"%(asctime)s : %(levelname)s [%(name)s %(funcName)s] %(message)s\",\n", + " \"log_level\": 10,\n", + " \"logging_config\": {},\n", + " \"provenance_log\": \"/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/mytool.provenance.log\",\n", + " \"quiet\": false,\n", + " \"show_config\": false,\n", + " \"show_config_json\": false,\n", + " \"MyComponent\": {\n", + " \"value\": -1\n", + " },\n", + " \"SecondaryMyComponent\": {\n", + " \"value\": -1\n", + " },\n", + " \"TelescopeWiseComponent\": {\n", + " \"param\": [\n", + " [\n", + " \"type\",\n", + " \"*\",\n", + " 5.0\n", + " ]\n", + " ]\n", + " },\n", + " \"AdvancedComponent\": {\n", + " \"infile\": \"/home/tb273079/.cache/ctapipe/cccta-dataserver.in2p3.fr/data/ctapipe-test-data/v1.1.0/gamma_prod5.simtel.zst\",\n", + " \"outfile\": \"/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/out.csv\",\n", + " \"value1\": -1,\n", + " \"MyComponent\": {\n", + " \"value\": -1\n", + " }\n", + " }\n", + " }\n", + " },\n", + " \"status\": \"completed\",\n", + " \"duration_min\": 0.005416666666562264\n", + " }\n", + "]'\n", + "2023-01-20 16:47:55,044 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool] (application.exit): Exiting application: mytool\n" + ] + } + ], "source": [ "try:\n", " tool.run(\n", @@ -371,11 +4441,27 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 15, "metadata": { - "scrolled": true + "execution": { + "iopub.execute_input": "2023-01-20T15:47:56.667197Z", + "iopub.status.busy": "2023-01-20T15:47:56.666639Z", + "iopub.status.idle": "2023-01-20T15:47:56.804892Z", + "shell.execute_reply": "2023-01-20T15:47:56.804482Z", + "shell.execute_reply.started": "2023-01-20T15:47:56.667178Z" + }, + "tags": [] }, - "outputs": [], + "outputs": [ + { + "name": "stderr", + "output_type": "stream", + "text": [ + "2023-01-20 16:47:56,690 \u001b[1;33mWARNING\u001b[0m [__main__.mytool.AdvancedComponent] (3049709041.on_outfile_changed): Outfile was changed to '{'name': 'outfile', 'old': traitlets.Undefined, 'new': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/out.csv'), 'owner': <__main__.AdvancedComponent object at 0x7f1f898c65e0>, 'type': 'change'}'\n", + "2023-01-20 16:47:56,792 \u001b[1;33mWARNING\u001b[0m [__main__.mytool] (462504653.finish): Shutting down.\n" + ] + } + ], "source": [ "tool.iterations = 1\n", "tool.log_level = 0\n", @@ -395,9 +4481,25 @@ }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], + "execution_count": 16, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:47:58.188741Z", + "iopub.status.busy": "2023-01-20T15:47:58.188509Z", + "iopub.status.idle": "2023-01-20T15:47:58.192330Z", + "shell.execute_reply": "2023-01-20T15:47:58.191863Z", + "shell.execute_reply.started": "2023-01-20T15:47:58.188724Z" + } + }, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "bad value: The 'iterations' trait of a MyTool instance expected an int, not the str 'badval'.\n" + ] + } + ], "source": [ "try:\n", " tool.iterations = \"badval\"\n", @@ -416,9 +4518,25 @@ }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], + "execution_count": 17, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:47:59.387165Z", + "iopub.status.busy": "2023-01-20T15:47:59.386478Z", + "iopub.status.idle": "2023-01-20T15:47:59.390065Z", + "shell.execute_reply": "2023-01-20T15:47:59.389730Z", + "shell.execute_reply.started": "2023-01-20T15:47:59.387147Z" + } + }, + "outputs": [ + { + "name": "stderr", + "output_type": "stream", + "text": [ + "2023-01-20 16:47:59,388 \u001b[1;33mWARNING\u001b[0m [__main__.mytool.AdvancedComponent] (3049709041.on_outfile_changed): Outfile was changed to '{'name': 'outfile', 'old': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/out.csv'), 'new': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/Another.txt'), 'owner': <__main__.AdvancedComponent object at 0x7f1f898c65e0>, 'type': 'change'}'\n" + ] + } + ], "source": [ "tool.advanced.outfile = \"Another.txt\"" ] @@ -439,8 +4557,16 @@ }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, + "execution_count": 18, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:48:01.554890Z", + "iopub.status.busy": "2023-01-20T15:48:01.554712Z", + "iopub.status.idle": "2023-01-20T15:48:01.559148Z", + "shell.execute_reply": "2023-01-20T15:48:01.558705Z", + "shell.execute_reply.started": "2023-01-20T15:48:01.554873Z" + } + }, "outputs": [], "source": [ "tool2 = MyTool()" @@ -448,11 +4574,5528 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 19, "metadata": { - "scrolled": true + "execution": { + "iopub.execute_input": "2023-01-20T15:48:02.187182Z", + "iopub.status.busy": "2023-01-20T15:48:02.186764Z", + "iopub.status.idle": "2023-01-20T15:48:02.740658Z", + "shell.execute_reply": "2023-01-20T15:48:02.740189Z", + "shell.execute_reply.started": "2023-01-20T15:48:02.187166Z" + }, + "scrolled": true, + "tags": [] }, - "outputs": [], + "outputs": [ + { + "name": "stderr", + "output_type": "stream", + "text": [ + "2023-01-20 16:48:02,193 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.initialize): ctapipe version 0.17.1.dev457+ga222c281.d20230120\n", + "2023-01-20 16:48:02,194 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.run): Starting: mytool\n", + "2023-01-20 16:48:02,212 \u001b[1;33mWARNING\u001b[0m [__main__.mytool.AdvancedComponent] (3049709041.on_outfile_changed): Outfile was changed to '{'name': 'outfile', 'old': traitlets.Undefined, 'new': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/foo.txt'), 'owner': <__main__.AdvancedComponent object at 0x7f2009adee50>, 'type': 'change'}'\n", + "2023-01-20 16:48:02,214 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool] (tool.run): CONFIG: {'MyTool': {'config_files': [PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/Tools.json')], 'iterations': 5, 'log_config': {}, 'log_datefmt': '%Y-%m-%d %H:%M:%S', 'log_file': None, 'log_file_level': 'INFO', 'log_format': '[%(name)s]%(highlevel)s %(message)s', 'log_level': 10, 'logging_config': {}, 'provenance_log': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/mytool.provenance.log'), 'quiet': False, 'show_config': False, 'show_config_json': False, 'MyComponent': {'value': -1}, 'SecondaryMyComponent': {'value': -1}, 'TelescopeWiseComponent': {'param': [('type', '*', 5.0)]}, 'AdvancedComponent': {'infile': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/something.txt'), 'outfile': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/foo.txt'), 'value1': -1, 'MyComponent': {'value': -1}}}}\n", + "2023-01-20 16:48:02,214 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (462504653.start): Performing 5 iterations...\n", + "2023-01-20 16:48:02,215 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (462504653.start): ITERATION 0\n", + "2023-01-20 16:48:02,215 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.MyComponent] (3049709041.do_thing): Did thing\n", + "2023-01-20 16:48:02,215 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.SecondaryMyComponent] (3049709041.do_thing): Did thing\n", + "2023-01-20 16:48:02,316 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (462504653.start): ITERATION 1\n", + "2023-01-20 16:48:02,316 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.MyComponent] (3049709041.do_thing): Did thing\n", + "2023-01-20 16:48:02,317 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.SecondaryMyComponent] (3049709041.do_thing): Did thing\n", + "2023-01-20 16:48:02,417 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (462504653.start): ITERATION 2\n", + "2023-01-20 16:48:02,418 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.MyComponent] (3049709041.do_thing): Did thing\n", + "2023-01-20 16:48:02,418 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.SecondaryMyComponent] (3049709041.do_thing): Did thing\n", + "2023-01-20 16:48:02,519 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (462504653.start): ITERATION 3\n", + "2023-01-20 16:48:02,519 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.MyComponent] (3049709041.do_thing): Did thing\n", + "2023-01-20 16:48:02,519 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.SecondaryMyComponent] (3049709041.do_thing): Did thing\n", + "2023-01-20 16:48:02,620 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (462504653.start): ITERATION 4\n", + "2023-01-20 16:48:02,620 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.MyComponent] (3049709041.do_thing): Did thing\n", + "2023-01-20 16:48:02,621 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.SecondaryMyComponent] (3049709041.do_thing): Did thing\n", + "2023-01-20 16:48:02,721 \u001b[1;33mWARNING\u001b[0m [__main__.mytool] (462504653.finish): Shutting down.\n", + "2023-01-20 16:48:02,722 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.run): Finished: mytool\n", + "2023-01-20 16:48:02,724 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.write_provenance): Output: \n", + "2023-01-20 16:48:02,724 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.write_provenance): Output: \n", + "2023-01-20 16:48:02,724 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.write_provenance): Output: \n", + "2023-01-20 16:48:02,725 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.write_provenance): Output: \n", + "2023-01-20 16:48:02,725 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.write_provenance): Output: \n", + "2023-01-20 16:48:02,730 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool] (tool.write_provenance): PROVENANCE: '[\n", + " {\n", + " \"activity_name\": \"mytool\",\n", + " \"activity_uuid\": \"21472903-b1d8-4648-97ae-83284fc2c11c\",\n", + " \"start\": {\n", + " \"time_utc\": \"2023-01-20T15:47:52.586\"\n", + " },\n", + " \"stop\": {\n", + " \"time_utc\": \"2023-01-20T15:47:53.106\"\n", + " },\n", + " \"system\": {\n", + " 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\"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"threadpoolctl\",\n", + " \"version\": \"3.1.0\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"tinycss2\",\n", + " \"version\": \"1.2.1\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"toml\",\n", + " \"version\": \"0.10.2\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"tomli\",\n", + " \"version\": \"2.0.1\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"tomlkit\",\n", + " \"version\": \"0.11.1\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"toolz\",\n", + " \"version\": \"0.12.0\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"tornado\",\n", + " \"version\": \"6.2\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"tqdm\",\n", + " \"version\": \"4.64.1\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"traitlets\",\n", + " \"version\": \"5.6.0\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"typing-extensions\",\n", + " \"version\": \"4.4.0\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"ukkonen\",\n", + " \"version\": \"1.0.1\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"unicodedata2\",\n", + " \"version\": \"15.0.0\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"urllib3\",\n", + " \"version\": \"1.26.13\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"urwid\",\n", + " \"version\": \"2.1.2\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"urwid-readline\",\n", + " \"version\": \"0.13\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"virtualenv\",\n", + " \"version\": \"20.17.0\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"wcwidth\",\n", + " \"version\": \"0.2.5\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"webencodings\",\n", + " \"version\": \"0.5.1\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"websocket-client\",\n", + " \"version\": \"1.4.2\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"wheel\",\n", + " \"version\": \"0.38.4\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"widgetsnbextension\",\n", + " \"version\": \"4.0.3\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"wrapt\",\n", + " \"version\": \"1.14.1\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"zipp\",\n", + " \"version\": \"3.11.0\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " },\n", + " {\n", + " \"name\": \"zstandard\",\n", + " \"version\": \"0.19.0\",\n", + " \"path\": \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages\"\n", + " }\n", + " ]\n", + " },\n", + " \"environment\": {\n", + " \"CONDA_DEFAULT_ENV\": \"cta-dev\",\n", + " \"CONDA_PREFIX\": \"/local/home/tb273079/miniconda3/envs/cta-dev\",\n", + " \"CONDA_PYTHON_EXE\": \"/local/home/tb273079/miniconda3/bin/python\",\n", + " \"CONDA_EXE\": \"/local/home/tb273079/miniconda3/bin/conda\",\n", + " \"CONDA_PROMPT_MODIFIER\": \"(cta-dev) \",\n", + " \"CONDA_SHLVL\": \"1\",\n", + " \"PATH\": \"/local/home/tb273079/miniconda3/envs/cta-dev/bin:/local/home/tb273079/miniconda3/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin:/opt/puppetlabs/bin\",\n", + " \"LD_LIBRARY_PATH\": null,\n", + " \"DYLD_LIBRARY_PATH\": null,\n", + " \"USER\": \"tb273079\",\n", + " \"HOME\": \"/home/tb273079\",\n", + " \"SHELL\": \"/bin/bash\"\n", + " },\n", + " \"arguments\": [\n", + " \"/local/home/tb273079/miniconda3/envs/cta-dev/lib/python3.9/site-packages/ipykernel_launcher.py\",\n", + " \"-f\",\n", + " \"/home/tb273079/.local/share/jupyter/runtime/kernel-dfaf2061-1824-4548-a293-6d9d4420f65d.json\"\n", + " ],\n", + " \"start_time_utc\": \"2023-01-20T15:48:02.209\"\n", + " },\n", + " \"input\": [],\n", + " \"output\": [],\n", + " \"config\": {\n", + " \"MyTool\": {\n", + " \"config_files\": [\n", + " \"/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/Tools.json\"\n", + " ],\n", + " \"iterations\": 5,\n", + " \"log_config\": {},\n", + " \"log_datefmt\": \"%Y-%m-%d %H:%M:%S\",\n", + " \"log_file\": null,\n", + " \"log_file_level\": \"INFO\",\n", + " \"log_format\": \"[%(name)s]%(highlevel)s %(message)s\",\n", + " \"log_level\": 10,\n", + " \"logging_config\": {},\n", + " \"provenance_log\": \"/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/mytool.provenance.log\",\n", + " \"quiet\": false,\n", + " \"show_config\": false,\n", + " \"show_config_json\": false,\n", + " \"MyComponent\": {\n", + " \"value\": -1\n", + " },\n", + " \"SecondaryMyComponent\": {\n", + " \"value\": -1\n", + " },\n", + " \"TelescopeWiseComponent\": {\n", + " \"param\": [\n", + " [\n", + " \"type\",\n", + " \"*\",\n", + " 5.0\n", + " ]\n", + " ]\n", + " },\n", + " \"AdvancedComponent\": {\n", + " \"infile\": \"/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/something.txt\",\n", + " \"outfile\": \"/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/foo.txt\",\n", + " \"value1\": -1,\n", + " \"MyComponent\": {\n", + " \"value\": -1\n", + " }\n", + " }\n", + " }\n", + " },\n", + " \"status\": \"completed\",\n", + " \"duration_min\": 0.008799999999897778\n", + " }\n", + "]'\n", + "2023-01-20 16:48:02,738 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool] (application.exit): Exiting application: mytool\n" + ] + } + ], "source": [ "try:\n", " tool2.run(argv=[\"--config\", \"Tools.json\"])\n", @@ -462,35 +10105,94 @@ }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], + "execution_count": 20, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:48:03.979227Z", + "iopub.status.busy": "2023-01-20T15:48:03.978758Z", + "iopub.status.idle": "2023-01-20T15:48:03.982478Z", + "shell.execute_reply": "2023-01-20T15:48:03.982032Z", + "shell.execute_reply.started": "2023-01-20T15:48:03.979207Z" + } + }, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/something.txt\n" + ] + } + ], "source": [ "print(tool2.advanced.infile)" ] }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], + "execution_count": 21, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:48:04.250851Z", + "iopub.status.busy": "2023-01-20T15:48:04.250619Z", + "iopub.status.idle": "2023-01-20T15:48:04.253988Z", + "shell.execute_reply": "2023-01-20T15:48:04.253507Z", + "shell.execute_reply.started": "2023-01-20T15:48:04.250836Z" + } + }, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "{'MyTool': {'config_files': ['Tools.json'], 'log_level': 'DEBUG'}, 'AdvancedComponent': {'infile': 'something.txt', 'outfile': 'foo.txt'}}\n" + ] + } + ], "source": [ "print(tool2.config)" ] }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], + "execution_count": 22, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:48:04.603264Z", + "iopub.status.busy": "2023-01-20T15:48:04.602981Z", + "iopub.status.idle": "2023-01-20T15:48:04.607618Z", + "shell.execute_reply": "2023-01-20T15:48:04.607198Z", + "shell.execute_reply.started": "2023-01-20T15:48:04.603242Z" + } + }, + "outputs": [ + { + "data": { + "text/plain": [ + "True" + ] + }, + "execution_count": 22, + "metadata": {}, + "output_type": "execute_result" + } + ], "source": [ "tool2.is_setup" ] }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, + "execution_count": 23, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:48:05.029580Z", + "iopub.status.busy": "2023-01-20T15:48:05.029352Z", + "iopub.status.idle": "2023-01-20T15:48:05.033554Z", + "shell.execute_reply": "2023-01-20T15:48:05.033071Z", + "shell.execute_reply.started": "2023-01-20T15:48:05.029566Z" + } + }, "outputs": [], "source": [ "tool3 = MyTool()" @@ -498,17 +10200,44 @@ }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], + "execution_count": 24, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:48:05.546870Z", + "iopub.status.busy": "2023-01-20T15:48:05.546583Z", + "iopub.status.idle": "2023-01-20T15:48:05.550622Z", + "shell.execute_reply": "2023-01-20T15:48:05.550184Z", + "shell.execute_reply.started": "2023-01-20T15:48:05.546854Z" + } + }, + "outputs": [ + { + "data": { + "text/plain": [ + "False" + ] + }, + "execution_count": 24, + "metadata": {}, + "output_type": "execute_result" + } + ], "source": [ "tool3.is_setup" ] }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, + "execution_count": 25, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:48:05.858915Z", + "iopub.status.busy": "2023-01-20T15:48:05.858737Z", + "iopub.status.idle": "2023-01-20T15:48:05.865481Z", + "shell.execute_reply": "2023-01-20T15:48:05.865111Z", + "shell.execute_reply.started": "2023-01-20T15:48:05.858901Z" + } + }, "outputs": [], "source": [ "tool3.initialize(argv=[])" @@ -516,27 +10245,302 @@ }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], + "execution_count": 26, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:48:07.091127Z", + "iopub.status.busy": "2023-01-20T15:48:07.090618Z", + "iopub.status.idle": "2023-01-20T15:48:07.094148Z", + "shell.execute_reply": "2023-01-20T15:48:07.093782Z", + "shell.execute_reply.started": "2023-01-20T15:48:07.091110Z" + } + }, + "outputs": [ + { + "data": { + "text/plain": [ + "False" + ] + }, + "execution_count": 26, + "metadata": {}, + "output_type": "execute_result" + } + ], "source": [ "tool3.is_setup" ] }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], + "execution_count": 27, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:48:07.330941Z", + "iopub.status.busy": "2023-01-20T15:48:07.330739Z", + "iopub.status.idle": "2023-01-20T15:48:07.338191Z", + "shell.execute_reply": "2023-01-20T15:48:07.337683Z", + "shell.execute_reply.started": "2023-01-20T15:48:07.330926Z" + } + }, + "outputs": [ + { + "data": { + "text/html": [ + "MyTool\n", + "

\n", + "

do some things and stuff

\n", + "
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\n", + "\n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + " \n", + "
config_files[] (default: traitlets.Undefined)
iterations5Number of times to run (default: 5)
log_config{} (default: traitlets.Undefined)
log_datefmt%Y-%m-%d %H:%M:%SThe date format used by logging formatters for %(asctime)s (default: %Y-%m-%d %H:%M:%S)
log_fileNoneFilename for the log (default: None)
log_file_levelINFOLogging Level for File Logging (default: INFO)
log_format[%(name)s]%(highlevel)s %(message)sThe Logging format template (default: [%(name)s]%(highlevel)s %(message)s)
log_level30Set the log level by value or name. (default: 30)
logging_config{}\n", + " Configure additional log handlers.\n", + "\n", + " The default stderr logs handler is configured by the\n", + " log_level, log_datefmt and log_format settings.\n", + "\n", + " This configuration can be used to configure additional handlers\n", + " (e.g. to output the log to a file) or for finer control over the\n", + " default handlers.\n", + "\n", + " If provided this should be a logging configuration dictionary, for\n", + " more information see:\n", + " https://docs.python.org/3/library/logging.config.html#logging-config-dictschema\n", + "\n", + " This dictionary is merged with the base logging configuration which\n", + " defines the following:\n", + "\n", + " * A logging formatter intended for interactive use called\n", + " ``console``.\n", + " * A logging handler that writes to stderr called\n", + " ``console`` which uses the formatter ``console``.\n", + " * A logger with the name of this application set to ``DEBUG``\n", + " level.\n", + "\n", + " This example adds a new handler that writes to a file:\n", + "\n", + " .. code-block:: python\n", + "\n", + " c.Application.logging_config = {\n", + " 'handlers': {\n", + " 'file': {\n", + " 'class': 'logging.FileHandler',\n", + " 'level': 'DEBUG',\n", + " 'filename': '',\n", + " }\n", + " },\n", + " 'loggers': {\n", + " '': {\n", + " 'level': 'DEBUG',\n", + " # NOTE: if you don't list the default \"console\"\n", + " # handler here then it will be disabled\n", + " 'handlers': ['console', 'file'],\n", + " },\n", + " }\n", + " }\n", + "\n", + " (default: traitlets.Undefined)
provenance_log/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/mytool.provenance.log (default: traitlets.Undefined)
quietFalse (default: False)
show_configFalseInstead of starting the Application, dump configuration to stdout (default: False)
show_config_jsonFalseInstead of starting the Application, dump configuration to stdout (as JSON) (default: False)
\n", + "

Components:\n", + "MyTool, MyComponent, AdvancedComponent, SecondaryMyComponent, TelescopeWiseComponent\n", + "

\n", + "" + ], + "text/plain": [ + "<__main__.MyTool at 0x7f1f80cc1d30>" + ] + }, + "execution_count": 27, + "metadata": {}, + "output_type": "execute_result" + } + ], "source": [ "tool3" ] }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], + "execution_count": 28, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:48:09.026629Z", + "iopub.status.busy": "2023-01-20T15:48:09.026410Z", + "iopub.status.idle": "2023-01-20T15:48:09.035609Z", + "shell.execute_reply": "2023-01-20T15:48:09.035264Z", + "shell.execute_reply.started": "2023-01-20T15:48:09.026615Z" + }, + "tags": [] + }, + "outputs": [ + { + "name": "stderr", + "output_type": "stream", + "text": [ + "2023-01-20 16:48:09,029 \u001b[1;33mWARNING\u001b[0m [__main__.mytool.AdvancedComponent] (3049709041.on_outfile_changed): Outfile was changed to '{'name': 'outfile', 'old': traitlets.Undefined, 'new': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/out.csv'), 'owner': <__main__.AdvancedComponent object at 0x7f1f898d35e0>, 'type': 'change'}'\n" + ] + }, + { + "data": { + "text/html": [ + "MyTool\n", + "

\n", + "

do some things and stuff

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\n", + "\n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n", + " \n", + "
config_files[] (default: traitlets.Undefined)
iterations1Number of times to run (default: 5)
log_config{} (default: traitlets.Undefined)
log_datefmt%Y-%m-%d %H:%M:%SThe date format used by logging formatters for %(asctime)s (default: %Y-%m-%d %H:%M:%S)
log_fileNoneFilename for the log (default: None)
log_file_levelINFOLogging Level for File Logging (default: INFO)
log_format%(asctime)s : %(levelname)s [%(name)s %(funcName)s] %(message)sThe Logging format template (default: [%(name)s]%(highlevel)s %(message)s)
log_level0Set the log level by value or name. (default: 30)
logging_config{}\n", + " Configure additional log handlers.\n", + "\n", + " The default stderr logs handler is configured by the\n", + " log_level, log_datefmt and log_format settings.\n", + "\n", + " This configuration can be used to configure additional handlers\n", + " (e.g. to output the log to a file) or for finer control over the\n", + " default handlers.\n", + "\n", + " If provided this should be a logging configuration dictionary, for\n", + " more information see:\n", + " https://docs.python.org/3/library/logging.config.html#logging-config-dictschema\n", + "\n", + " This dictionary is merged with the base logging configuration which\n", + " defines the following:\n", + "\n", + " * A logging formatter intended for interactive use called\n", + " ``console``.\n", + " * A logging handler that writes to stderr called\n", + " ``console`` which uses the formatter ``console``.\n", + " * A logger with the name of this application set to ``DEBUG``\n", + " level.\n", + "\n", + " This example adds a new handler that writes to a file:\n", + "\n", + " .. code-block:: python\n", + "\n", + " c.Application.logging_config = {\n", + " 'handlers': {\n", + " 'file': {\n", + " 'class': 'logging.FileHandler',\n", + " 'level': 'DEBUG',\n", + " 'filename': '',\n", + " }\n", + " },\n", + " 'loggers': {\n", + " '': {\n", + " 'level': 'DEBUG',\n", + " # NOTE: if you don't list the default \"console\"\n", + " # handler here then it will be disabled\n", + " 'handlers': ['console', 'file'],\n", + " },\n", + " }\n", + " }\n", + "\n", + " (default: traitlets.Undefined)
provenance_log/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/mytool.provenance.log (default: traitlets.Undefined)
quietFalse (default: False)
show_configFalseInstead of starting the Application, dump configuration to stdout (default: False)
show_config_jsonFalseInstead of starting the Application, dump configuration to stdout (as JSON) (default: False)
\n", + "

Components:\n", + "MyTool, MyComponent, AdvancedComponent, SecondaryMyComponent, TelescopeWiseComponent\n", + "

\n", + "" + ], + "text/plain": [ + "<__main__.MyTool at 0x7f1f80d138e0>" + ] + }, + "execution_count": 28, + "metadata": {}, + "output_type": "execute_result" + } + ], "source": [ "tool.setup()\n", "tool" @@ -544,9 +10548,50 @@ }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], + "execution_count": 30, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:48:16.716148Z", + "iopub.status.busy": "2023-01-20T15:48:16.715925Z", + "iopub.status.idle": "2023-01-20T15:48:16.721757Z", + "shell.execute_reply": "2023-01-20T15:48:16.721424Z", + "shell.execute_reply.started": "2023-01-20T15:48:16.716133Z" + }, + "tags": [] + }, + "outputs": [ + { + "data": { + "text/html": [ + "
\n", + "SecondaryMyComponent\n", + "

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A second component

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value-1Value to use (default: -1)
\n", + "
" + ], + "text/plain": [ + "<__main__.SecondaryMyComponent at 0x7f1ff8427fd0>" + ] + }, + "execution_count": 30, + "metadata": {}, + "output_type": "execute_result" + } + ], "source": [ "tool.comp2" ] @@ -560,18 +10605,98 @@ }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], + "execution_count": 31, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:48:21.971403Z", + "iopub.status.busy": "2023-01-20T15:48:21.970834Z", + "iopub.status.idle": "2023-01-20T15:48:21.975590Z", + "shell.execute_reply": "2023-01-20T15:48:21.975148Z", + "shell.execute_reply.started": "2023-01-20T15:48:21.971386Z" + } + }, + "outputs": [ + { + "data": { + "text/plain": [ + "{'MyTool': {'config_files': [],\n", + " 'iterations': 1,\n", + " 'log_config': {},\n", + " 'log_datefmt': '%Y-%m-%d %H:%M:%S',\n", + " 'log_file': None,\n", + " 'log_file_level': 'INFO',\n", + " 'log_format': '%(asctime)s : %(levelname)s [%(name)s %(funcName)s] %(message)s',\n", + " 'log_level': 0,\n", + " 'logging_config': {},\n", + " 'provenance_log': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/mytool.provenance.log'),\n", + " 'quiet': False,\n", + " 'show_config': False,\n", + " 'show_config_json': False,\n", + " 'MyComponent': {'value': -1},\n", + " 'SecondaryMyComponent': {'value': -1},\n", + " 'TelescopeWiseComponent': {'param': TelescopePatternList([('type',\n", + " '*',\n", + " 5.0)])},\n", + " 'AdvancedComponent': {'infile': PosixPath('/home/tb273079/.cache/ctapipe/cccta-dataserver.in2p3.fr/data/ctapipe-test-data/v1.1.0/gamma_prod5.simtel.zst'),\n", + " 'outfile': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/out.csv'),\n", + " 'value1': -1,\n", + " 'MyComponent': {'value': -1}}}}" + ] + }, + "execution_count": 31, + "metadata": {}, + "output_type": "execute_result" + } + ], "source": [ "tool.get_current_config()" ] }, { "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], + "execution_count": 32, + "metadata": { + "execution": { + "iopub.execute_input": "2023-01-20T15:48:22.939030Z", + "iopub.status.busy": "2023-01-20T15:48:22.938814Z", + "iopub.status.idle": "2023-01-20T15:48:22.943077Z", + "shell.execute_reply": "2023-01-20T15:48:22.942648Z", + "shell.execute_reply.started": "2023-01-20T15:48:22.939016Z" + } + }, + "outputs": [ + { + "data": { + "text/plain": [ + "{'MyTool': {'config_files': [],\n", + " 'iterations': 12,\n", + " 'log_config': {},\n", + " 'log_datefmt': '%Y-%m-%d %H:%M:%S',\n", + " 'log_file': None,\n", + " 'log_file_level': 'INFO',\n", + " 'log_format': '%(asctime)s : %(levelname)s [%(name)s %(funcName)s] %(message)s',\n", + " 'log_level': 0,\n", + " 'logging_config': {},\n", + " 'provenance_log': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/mytool.provenance.log'),\n", + " 'quiet': False,\n", + " 'show_config': False,\n", + " 'show_config_json': False,\n", + " 'MyComponent': {'value': -1},\n", + " 'SecondaryMyComponent': {'value': -1},\n", + " 'TelescopeWiseComponent': {'param': TelescopePatternList([('type',\n", + " '*',\n", + " 5.0)])},\n", + " 'AdvancedComponent': {'infile': PosixPath('/home/tb273079/.cache/ctapipe/cccta-dataserver.in2p3.fr/data/ctapipe-test-data/v1.1.0/gamma_prod5.simtel.zst'),\n", + " 'outfile': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/out.csv'),\n", + " 'value1': -1,\n", + " 'MyComponent': {'value': -1}}}}" + ] + }, + "execution_count": 32, + "metadata": {}, + "output_type": "execute_result" + } + ], "source": [ "tool.iterations = 12\n", "tool.get_current_config()" @@ -586,14 +10711,256 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 33, "metadata": { - "scrolled": false + "execution": { + "iopub.execute_input": "2023-01-20T15:48:24.532240Z", + "iopub.status.busy": "2023-01-20T15:48:24.532014Z", + "iopub.status.idle": "2023-01-20T15:48:24.544572Z", + "shell.execute_reply": "2023-01-20T15:48:24.544100Z", + "shell.execute_reply.started": "2023-01-20T15:48:24.532224Z" + } }, - "outputs": [], + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "# Configuration file for mytool.\n", + "\n", + "c = get_config() # noqa\n", + "\n", + "#------------------------------------------------------------------------------\n", + "# Application(SingletonConfigurable) configuration\n", + "#------------------------------------------------------------------------------\n", + "## This is an application.\n", + "\n", + "## The date format used by logging formatters for %(asctime)s\n", + "# Default: '%Y-%m-%d %H:%M:%S'\n", + "# c.Application.log_datefmt = '%Y-%m-%d %H:%M:%S'\n", + "\n", + "## The Logging format template\n", + "# Default: '[%(name)s]%(highlevel)s %(message)s'\n", + "# c.Application.log_format = '[%(name)s]%(highlevel)s %(message)s'\n", + "\n", + "## Set the log level by value or name.\n", + "# Choices: any of [0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL']\n", + "# Default: 30\n", + "# c.Application.log_level = 30\n", + "\n", + "## Configure additional log handlers.\n", + "# \n", + "# The default stderr logs handler is configured by the log_level, log_datefmt\n", + "# and log_format settings.\n", + "# \n", + "# This configuration can be used to configure additional handlers (e.g. to\n", + "# output the log to a file) or for finer control over the default handlers.\n", + "# \n", + "# If provided this should be a logging configuration dictionary, for more\n", + "# information see:\n", + "# https://docs.python.org/3/library/logging.config.html#logging-config-\n", + "# dictschema\n", + "# \n", + "# This dictionary is merged with the base logging configuration which defines\n", + "# the following:\n", + "# \n", + "# * A logging formatter intended for interactive use called\n", + "# ``console``.\n", + "# * A logging handler that writes to stderr called\n", + "# ``console`` which uses the formatter ``console``.\n", + "# * A logger with the name of this application set to ``DEBUG``\n", + "# level.\n", + "# \n", + "# This example adds a new handler that writes to a file:\n", + "# \n", + "# .. code-block:: python\n", + "# \n", + "# c.Application.logging_config = {\n", + "# 'handlers': {\n", + "# 'file': {\n", + "# 'class': 'logging.FileHandler',\n", + "# 'level': 'DEBUG',\n", + "# 'filename': '',\n", + "# }\n", + "# },\n", + "# 'loggers': {\n", + "# '': {\n", + "# 'level': 'DEBUG',\n", + "# # NOTE: if you don't list the default \"console\"\n", + "# # handler here then it will be disabled\n", + "# 'handlers': ['console', 'file'],\n", + "# },\n", + "# }\n", + "# }\n", + "# Default: {}\n", + "# c.Application.logging_config = {}\n", + "\n", + "## Instead of starting the Application, dump configuration to stdout\n", + "# Default: False\n", + "# c.Application.show_config = False\n", + "\n", + "## Instead of starting the Application, dump configuration to stdout (as JSON)\n", + "# Default: False\n", + "# c.Application.show_config_json = False\n", + "\n", + "#------------------------------------------------------------------------------\n", + "# Tool(Application) configuration\n", + "#------------------------------------------------------------------------------\n", + "## This is an application.\n", + "\n", + "# Default: []\n", + "# c.Tool.config_files = []\n", + "\n", + "# Default: {}\n", + "# c.Tool.log_config = {}\n", + "\n", + "## The date format used by logging formatters for %(asctime)s\n", + "# See also: Application.log_datefmt\n", + "# c.Tool.log_datefmt = '%Y-%m-%d %H:%M:%S'\n", + "\n", + "## Filename for the log\n", + "# Default: None\n", + "# c.Tool.log_file = None\n", + "\n", + "## Logging Level for File Logging\n", + "# Choices: any of [0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL']\n", + "# Default: 'INFO'\n", + "# c.Tool.log_file_level = 'INFO'\n", + "\n", + "## The Logging format template\n", + "# See also: Application.log_format\n", + "# c.Tool.log_format = '[%(name)s]%(highlevel)s %(message)s'\n", + "\n", + "## Set the log level by value or name.\n", + "# See also: Application.log_level\n", + "# c.Tool.log_level = 30\n", + "\n", + "## \n", + "# See also: Application.logging_config\n", + "# c.Tool.logging_config = {}\n", + "\n", + "# Default: traitlets.Undefined\n", + "# c.Tool.provenance_log = traitlets.Undefined\n", + "\n", + "# Default: False\n", + "# c.Tool.quiet = False\n", + "\n", + "## Instead of starting the Application, dump configuration to stdout\n", + "# See also: Application.show_config\n", + "# c.Tool.show_config = False\n", + "\n", + "## Instead of starting the Application, dump configuration to stdout (as JSON)\n", + "# See also: Application.show_config_json\n", + "# c.Tool.show_config_json = False\n", + "\n", + "#------------------------------------------------------------------------------\n", + "# MyTool(Tool) configuration\n", + "#------------------------------------------------------------------------------\n", + "# See also: Tool.config_files\n", + "# c.MyTool.config_files = []\n", + "\n", + "## Number of times to run\n", + "# Default: 5\n", + "# c.MyTool.iterations = 5\n", + "\n", + "# See also: Tool.log_config\n", + "# c.MyTool.log_config = {}\n", + "\n", + "## The date format used by logging formatters for %(asctime)s\n", + "# See also: Application.log_datefmt\n", + "# c.MyTool.log_datefmt = '%Y-%m-%d %H:%M:%S'\n", + "\n", + "## Filename for the log\n", + "# See also: Tool.log_file\n", + "# c.MyTool.log_file = None\n", + "\n", + "## Logging Level for File Logging\n", + "# See also: Tool.log_file_level\n", + "# c.MyTool.log_file_level = 'INFO'\n", + "\n", + "## The Logging format template\n", + "# See also: Application.log_format\n", + "# c.MyTool.log_format = '[%(name)s]%(highlevel)s %(message)s'\n", + "\n", + "## Set the log level by value or name.\n", + "# See also: Application.log_level\n", + "# c.MyTool.log_level = 30\n", + "\n", + "## \n", + "# See also: Application.logging_config\n", + "# c.MyTool.logging_config = {}\n", + "\n", + "# See also: Tool.provenance_log\n", + "# c.MyTool.provenance_log = traitlets.Undefined\n", + "\n", + "# See also: Tool.quiet\n", + "# c.MyTool.quiet = False\n", + "\n", + "## Instead of starting the Application, dump configuration to stdout\n", + "# See also: Application.show_config\n", + "# c.MyTool.show_config = False\n", + "\n", + "## Instead of starting the Application, dump configuration to stdout (as JSON)\n", + "# See also: Application.show_config_json\n", + "# c.MyTool.show_config_json = False\n", + "\n", + "#------------------------------------------------------------------------------\n", + "# MyComponent(Component) configuration\n", + "#------------------------------------------------------------------------------\n", + "## A Component that does stuff\n", + "\n", + "## Value to use\n", + "# Default: -1\n", + "# c.MyComponent.value = -1\n", + "\n", + "#------------------------------------------------------------------------------\n", + "# AdvancedComponent(Component) configuration\n", + "#------------------------------------------------------------------------------\n", + "## An advanced technique\n", + "\n", + "## input file name\n", + "# Default: traitlets.Undefined\n", + "# c.AdvancedComponent.infile = traitlets.Undefined\n", + "\n", + "## output file name\n", + "# Default: traitlets.Undefined\n", + "# c.AdvancedComponent.outfile = traitlets.Undefined\n", + "\n", + "## Value to use\n", + "# Default: -1\n", + "# c.AdvancedComponent.value1 = -1\n", + "\n", + "#------------------------------------------------------------------------------\n", + "# SecondaryMyComponent(MyComponent) configuration\n", + "#------------------------------------------------------------------------------\n", + "## A second component\n", + "\n", + "## Value to use\n", + "# See also: MyComponent.value\n", + "# c.SecondaryMyComponent.value = -1\n", + "\n", + "#------------------------------------------------------------------------------\n", + "# TelescopeWiseComponent(TelescopeComponent) configuration\n", + "#------------------------------------------------------------------------------\n", + "## a component that contains parameters that are per-telescope configurable\n", + "\n", + "## Something configurable with telescope patterns.\n", + "# Default: [('type', '*', 5.0)]\n", + "# c.TelescopeWiseComponent.param = [('type', '*', 5.0)]\n", + "\n" + ] + } + ], "source": [ "print(tool.generate_config_file())" ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": {}, + "outputs": [], + "source": [] } ], "metadata": { @@ -612,7 +10979,7 @@ "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", - "version": "3.8.13" + "version": "3.9.15" } }, "nbformat": 4, From e8065c7a1b237cdfbfb5d75223f1c3db0278aefa Mon Sep 17 00:00:00 2001 From: Tomas Bylund Date: Fri, 20 Jan 2023 17:35:20 +0100 Subject: [PATCH 2/3] Clarified the role of in the docs --- docs/examples/Tools.ipynb | 10503 +----------------------------------- 1 file changed, 79 insertions(+), 10424 deletions(-) diff --git a/docs/examples/Tools.ipynb b/docs/examples/Tools.ipynb index 858392899fa..eb8fa3f9336 100644 --- a/docs/examples/Tools.ipynb +++ b/docs/examples/Tools.ipynb @@ -9,15 +9,9 @@ }, { "cell_type": "code", - "execution_count": 1, + "execution_count": null, "metadata": { - "execution": { - "iopub.execute_input": "2023-01-20T15:47:32.556431Z", - "iopub.status.busy": "2023-01-20T15:47:32.556200Z", - "iopub.status.idle": "2023-01-20T15:47:33.122371Z", - "shell.execute_reply": "2023-01-20T15:47:33.121771Z", - "shell.execute_reply.started": "2023-01-20T15:47:32.556391Z" - } + "tags": [] }, "outputs": [], "source": [ @@ -41,16 +35,8 @@ }, { "cell_type": "code", - "execution_count": 2, - "metadata": { - "execution": { - "iopub.execute_input": "2023-01-20T15:47:33.123236Z", - "iopub.status.busy": "2023-01-20T15:47:33.123060Z", - "iopub.status.idle": "2023-01-20T15:47:33.126138Z", - "shell.execute_reply": "2023-01-20T15:47:33.125668Z", - "shell.execute_reply.started": "2023-01-20T15:47:33.123222Z" - } - }, + "execution_count": null, + "metadata": {}, "outputs": [], "source": [ "GAMMA_FILE = get_dataset_path(\"gamma_prod5.simtel.zst\")" @@ -74,15 +60,8 @@ }, { "cell_type": "code", - "execution_count": 3, + "execution_count": null, "metadata": { - "execution": { - "iopub.execute_input": "2023-01-20T15:47:34.858924Z", - "iopub.status.busy": "2023-01-20T15:47:34.858716Z", - "iopub.status.idle": "2023-01-20T15:47:34.865470Z", - "shell.execute_reply": "2023-01-20T15:47:34.864955Z", - "shell.execute_reply.started": "2023-01-20T15:47:34.858910Z" - }, "tags": [] }, "outputs": [], @@ -138,112 +117,20 @@ }, { "cell_type": "code", - "execution_count": 4, + "execution_count": null, "metadata": { - "execution": { - "iopub.execute_input": "2023-01-20T15:47:35.682898Z", - "iopub.status.busy": "2023-01-20T15:47:35.682653Z", - "iopub.status.idle": "2023-01-20T15:47:35.724239Z", - "shell.execute_reply": "2023-01-20T15:47:35.723618Z", - "shell.execute_reply.started": "2023-01-20T15:47:35.682883Z" - }, "tags": [] }, - "outputs": [ - { - "data": { - "text/html": [ - "
\n", - "MyComponent\n", - "

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A Component that does stuff

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value-1Value to use (default: -1)
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" - ], - "text/plain": [ - "<__main__.MyComponent at 0x7f1f8eaf7970>" - ] - }, - "execution_count": 4, - "metadata": {}, - "output_type": "execute_result" - } - ], + "outputs": [], "source": [ "MyComponent()" ] }, { "cell_type": "code", - "execution_count": 5, - "metadata": { - "execution": { - "iopub.execute_input": "2023-01-20T15:47:36.570725Z", - "iopub.status.busy": "2023-01-20T15:47:36.570473Z", - "iopub.status.idle": "2023-01-20T15:47:36.578834Z", - "shell.execute_reply": "2023-01-20T15:47:36.578172Z", - "shell.execute_reply.started": "2023-01-20T15:47:36.570709Z" - } - }, - "outputs": [ - { - "name": "stderr", - "output_type": "stream", - "text": [ - "Outfile was changed to '{'name': 'outfile', 'old': traitlets.Undefined, 'new': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/out.foo'), 'owner': <__main__.AdvancedComponent object at 0x7f1f8e3d3e20>, 'type': 'change'}'\n" - ] - }, - { - "data": { - "text/html": [ - "
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infile/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/test.fooinput file name (default: traitlets.Undefined)
outfile/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/out.foooutput file name (default: traitlets.Undefined)
value1-1Value to use (default: -1)
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param[('type', '*', 5.0)]Something configurable with telescope patterns. (default: traitlets.Undefined)
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" - ], - "text/plain": [ - "<__main__.TelescopeWiseComponent at 0x7f1f80bebd90>" - ] - }, - "execution_count": 7, - "metadata": {}, - "output_type": "execute_result" - } - ], + "execution_count": null, + "metadata": {}, + "outputs": [], "source": [ "TelescopeWiseComponent(subarray=subarray)" ] @@ -370,16 +192,8 @@ }, { "cell_type": "code", - "execution_count": 8, - "metadata": { - "execution": { - "iopub.execute_input": "2023-01-20T15:47:40.063435Z", - "iopub.status.busy": "2023-01-20T15:47:40.063269Z", - "iopub.status.idle": "2023-01-20T15:47:40.070192Z", - "shell.execute_reply": "2023-01-20T15:47:40.069807Z", - "shell.execute_reply.started": "2023-01-20T15:47:40.063420Z" - } - }, + "execution_count": null, + "metadata": {}, "outputs": [], "source": [ "class MyTool(Tool):\n", @@ -436,134 +250,11 @@ }, { "cell_type": "code", - "execution_count": 9, + "execution_count": null, "metadata": { - "execution": { - "iopub.execute_input": "2023-01-20T15:47:41.229847Z", - "iopub.status.busy": "2023-01-20T15:47:41.229546Z", - "iopub.status.idle": "2023-01-20T15:47:41.237595Z", - "shell.execute_reply": "2023-01-20T15:47:41.237109Z", - "shell.execute_reply.started": "2023-01-20T15:47:41.229817Z" - }, "tags": [] }, - "outputs": [ - { - "data": { - "text/html": [ - "MyTool\n", - "

\n", - "

do some things and stuff

\n", - "
\n", - "

\n", - "\n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - "\n", - " \n", - "
config_files[] (default: traitlets.Undefined)
iterations5Number of times to run (default: 5)
log_config{} (default: traitlets.Undefined)
log_datefmt%Y-%m-%d %H:%M:%SThe date format used by logging formatters for %(asctime)s (default: %Y-%m-%d %H:%M:%S)
log_fileNoneFilename for the log (default: None)
log_file_levelINFOLogging Level for File Logging (default: INFO)
log_format[%(name)s]%(highlevel)s %(message)sThe Logging format template (default: [%(name)s]%(highlevel)s %(message)s)
log_level30Set the log level by value or name. (default: 30)
logging_config{}\n", - " Configure additional log handlers.\n", - "\n", - " The default stderr logs handler is configured by the\n", - " log_level, log_datefmt and log_format settings.\n", - "\n", - " This configuration can be used to configure additional handlers\n", - " (e.g. to output the log to a file) or for finer control over the\n", - " default handlers.\n", - "\n", - " If provided this should be a logging configuration dictionary, for\n", - " more information see:\n", - " https://docs.python.org/3/library/logging.config.html#logging-config-dictschema\n", - "\n", - " This dictionary is merged with the base logging configuration which\n", - " defines the following:\n", - "\n", - " * A logging formatter intended for interactive use called\n", - " ``console``.\n", - " * A logging handler that writes to stderr called\n", - " ``console`` which uses the formatter ``console``.\n", - " * A logger with the name of this application set to ``DEBUG``\n", - " level.\n", - "\n", - " This example adds a new handler that writes to a file:\n", - "\n", - " .. code-block:: python\n", - "\n", - " c.Application.logging_config = {\n", - " 'handlers': {\n", - " 'file': {\n", - " 'class': 'logging.FileHandler',\n", - " 'level': 'DEBUG',\n", - " 'filename': '',\n", - " }\n", - " },\n", - " 'loggers': {\n", - " '': {\n", - " 'level': 'DEBUG',\n", - " # NOTE: if you don't list the default \"console\"\n", - " # handler here then it will be disabled\n", - " 'handlers': ['console', 'file'],\n", - " },\n", - " }\n", - " }\n", - "\n", - " (default: traitlets.Undefined)
provenance_log/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/mytool.provenance.log (default: traitlets.Undefined)
quietFalse (default: False)
show_configFalseInstead of starting the Application, dump configuration to stdout (default: False)
show_config_jsonFalseInstead of starting the Application, dump configuration to stdout (as JSON) (default: False)
\n", - "

Components:\n", - "MyTool, MyComponent, AdvancedComponent, SecondaryMyComponent, TelescopeWiseComponent\n", - "

\n", - "" - ], - "text/plain": [ - "<__main__.MyTool at 0x7f1f80d138e0>" - ] - }, - "execution_count": 9, - "metadata": {}, - "output_type": "execute_result" - } - ], + "outputs": [], "source": [ "tool = MyTool()\n", "tool" @@ -571,83 +262,9 @@ }, { "cell_type": "code", - "execution_count": 10, - "metadata": { - "execution": { - "iopub.execute_input": "2023-01-20T15:47:44.970721Z", - "iopub.status.busy": "2023-01-20T15:47:44.970493Z", - "iopub.status.idle": "2023-01-20T15:47:44.975057Z", - "shell.execute_reply": "2023-01-20T15:47:44.974651Z", - "shell.execute_reply.started": "2023-01-20T15:47:44.970708Z" - } - }, - "outputs": [ - { - "name": "stdout", - "output_type": "stream", - "text": [ - "do some things and stuff\n", - "\n", - "Options\n", - "=======\n", - "The options below are convenience aliases to configurable class-options,\n", - "as listed in the \"Equivalent to\" description-line of the aliases.\n", - "To see all configurable class-options for some , use:\n", - " --help-all\n", - "\n", - "--debug\n", - " Set log-level to debug, for the most verbose logging.\n", - " Equivalent to: [--Application.log_level=10]\n", - "--show-config\n", - " Show the application's configuration (human-readable format)\n", - " Equivalent to: [--Application.show_config=True]\n", - "--show-config-json\n", - " Show the application's configuration (json format)\n", - " Equivalent to: [--Application.show_config_json=True]\n", - "-q, --quiet\n", - " Disable console logging.\n", - " Equivalent to: [--Tool.quiet=True]\n", - "-v, --verbose\n", - " Set log level to DEBUG\n", - " Equivalent to: [--Tool.log_level=DEBUG]\n", - "-c, --config=...\n", - " Default: []\n", - " Equivalent to: [--Tool.config_files]\n", - "--log-level=\n", - " Set the log level by value or name.\n", - " Choices: any of [0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL']\n", - " Default: 30\n", - " Equivalent to: [--Tool.log_level]\n", - "-l, --log-file=\n", - " Filename for the log\n", - " Default: None\n", - " Equivalent to: [--Tool.log_file]\n", - "--log-file-level=\n", - " Logging Level for File Logging\n", - " Choices: any of [0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL']\n", - " Default: 'INFO'\n", - " Equivalent to: [--Tool.log_file_level]\n", - "--provenance-log=\n", - " Default: traitlets.Undefined\n", - " Equivalent to: [--Tool.provenance_log]\n", - "--infile=\n", - " input file name\n", - " Default: traitlets.Undefined\n", - " Equivalent to: [--AdvancedComponent.infile]\n", - "--outfile=\n", - " output file name\n", - " Default: traitlets.Undefined\n", - " Equivalent to: [--AdvancedComponent.outfile]\n", - "--iterations=\n", - " Number of times to run\n", - " Default: 5\n", - " Equivalent to: [--MyTool.iterations]\n", - "\n", - "To see all available configurables, use `--help-all`.\n", - "\n" - ] - } - ], + "execution_count": null, + "metadata": {}, + "outputs": [], "source": [ "tool.print_help()" ] @@ -661,325 +278,12 @@ }, { "cell_type": "code", - "execution_count": 11, + "execution_count": null, "metadata": { - "execution": { - "iopub.execute_input": "2023-01-20T15:47:45.954726Z", - "iopub.status.busy": "2023-01-20T15:47:45.954553Z", - "iopub.status.idle": "2023-01-20T15:47:45.961296Z", - "shell.execute_reply": "2023-01-20T15:47:45.960706Z", - "shell.execute_reply.started": "2023-01-20T15:47:45.954713Z" - }, "scrolled": true, "tags": [] }, - "outputs": [ - { - "name": "stdout", - "output_type": "stream", - "text": [ - "do some things and stuff\n", - "\n", - "Options\n", - "=======\n", - "The options below are convenience aliases to configurable class-options,\n", - "as listed in the \"Equivalent to\" description-line of the aliases.\n", - "To see all configurable class-options for some , use:\n", - " --help-all\n", - "\n", - "--debug\n", - " Set log-level to debug, for the most verbose logging.\n", - " Equivalent to: [--Application.log_level=10]\n", - "--show-config\n", - " Show the application's configuration (human-readable format)\n", - " Equivalent to: [--Application.show_config=True]\n", - "--show-config-json\n", - " Show the application's configuration (json format)\n", - " Equivalent to: [--Application.show_config_json=True]\n", - "-q, --quiet\n", - " Disable console logging.\n", - " Equivalent to: [--Tool.quiet=True]\n", - "-v, --verbose\n", - " Set log level to DEBUG\n", - " Equivalent to: [--Tool.log_level=DEBUG]\n", - "-c, --config=...\n", - " Default: []\n", - " Equivalent to: [--Tool.config_files]\n", - "--log-level=\n", - " Set the log level by value or name.\n", - " Choices: any of [0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL']\n", - " Default: 30\n", - " Equivalent to: [--Tool.log_level]\n", - "-l, --log-file=\n", - " Filename for the log\n", - " Default: None\n", - " Equivalent to: [--Tool.log_file]\n", - "--log-file-level=\n", - " Logging Level for File Logging\n", - " Choices: any of [0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL']\n", - " Default: 'INFO'\n", - " Equivalent to: [--Tool.log_file_level]\n", - "--provenance-log=\n", - " Default: traitlets.Undefined\n", - " Equivalent to: [--Tool.provenance_log]\n", - "--infile=\n", - " input file name\n", - " Default: traitlets.Undefined\n", - " Equivalent to: [--AdvancedComponent.infile]\n", - "--outfile=\n", - " output file name\n", - " Default: traitlets.Undefined\n", - " Equivalent to: [--AdvancedComponent.outfile]\n", - "--iterations=\n", - " Number of times to run\n", - " Default: 5\n", - " Equivalent to: [--MyTool.iterations]\n", - "\n", - "Class options\n", - "=============\n", - "The command-line option below sets the respective configurable class-parameter:\n", - " --Class.parameter=value\n", - "This line is evaluated in Python, so simple expressions are allowed.\n", - "For instance, to set `C.a=[0,1,2]`, you may type this:\n", - " --C.a='range(3)'\n", - "\n", - "Application(SingletonConfigurable) options\n", - "------------------------------------------\n", - "--Application.log_datefmt=\n", - " The date format used by logging formatters for %(asctime)s\n", - " Default: '%Y-%m-%d %H:%M:%S'\n", - "--Application.log_format=\n", - " The Logging format template\n", - " Default: '[%(name)s]%(highlevel)s %(message)s'\n", - "--Application.log_level=\n", - " Set the log level by value or name.\n", - " Choices: any of [0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL']\n", - " Default: 30\n", - "--Application.logging_config==...\n", - " Configure additional log handlers.\n", - " The default stderr logs handler is configured by the log_level, log_datefmt\n", - " and log_format settings.\n", - " This configuration can be used to configure additional handlers (e.g. to\n", - " output the log to a file) or for finer control over the default handlers.\n", - " If provided this should be a logging configuration dictionary, for more\n", - " information see:\n", - " https://docs.python.org/3/library/logging.config.html#logging-config-\n", - " dictschema\n", - " This dictionary is merged with the base logging configuration which defines\n", - " the following:\n", - " * A logging formatter intended for interactive use called\n", - " ``console``.\n", - " * A logging handler that writes to stderr called\n", - " ``console`` which uses the formatter ``console``.\n", - " * A logger with the name of this application set to ``DEBUG``\n", - " level.\n", - " This example adds a new handler that writes to a file:\n", - " .. code-block:: python\n", - " c.Application.logging_config = {\n", - " 'handlers': {\n", - " 'file': {\n", - " 'class': 'logging.FileHandler',\n", - " 'level': 'DEBUG',\n", - " 'filename': '',\n", - " }\n", - " },\n", - " 'loggers': {\n", - " '': {\n", - " 'level': 'DEBUG',\n", - " # NOTE: if you don't list the default \"console\"\n", - " # handler here then it will be disabled\n", - " 'handlers': ['console', 'file'],\n", - " },\n", - " }\n", - " }\n", - " Default: {}\n", - "--Application.show_config=\n", - " Instead of starting the Application, dump configuration to stdout\n", - " Default: False\n", - "--Application.show_config_json=\n", - " Instead of starting the Application, dump configuration to stdout (as JSON)\n", - " Default: False\n", - "\n", - "Tool(Application) options\n", - "-------------------------\n", - "--Tool.config_files=...\n", - " Default: []\n", - "--Tool.log_config==...\n", - " Default: {}\n", - "--Tool.log_datefmt=\n", - " The date format used by logging formatters for %(asctime)s\n", - " Default: '%Y-%m-%d %H:%M:%S'\n", - "--Tool.log_file=\n", - " Filename for the log\n", - " Default: None\n", - "--Tool.log_file_level=\n", - " Logging Level for File Logging\n", - " Choices: any of [0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL']\n", - " Default: 'INFO'\n", - "--Tool.log_format=\n", - " The Logging format template\n", - " Default: '[%(name)s]%(highlevel)s %(message)s'\n", - "--Tool.log_level=\n", - " Set the log level by value or name.\n", - " Choices: any of [0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL']\n", - " Default: 30\n", - "--Tool.logging_config==...\n", - " Configure additional log handlers.\n", - " The default stderr logs handler is configured by the log_level, log_datefmt\n", - " and log_format settings.\n", - " This configuration can be used to configure additional handlers (e.g. to\n", - " output the log to a file) or for finer control over the default handlers.\n", - " If provided this should be a logging configuration dictionary, for more\n", - " information see:\n", - " https://docs.python.org/3/library/logging.config.html#logging-config-\n", - " dictschema\n", - " This dictionary is merged with the base logging configuration which defines\n", - " the following:\n", - " * A logging formatter intended for interactive use called\n", - " ``console``.\n", - " * A logging handler that writes to stderr called\n", - " ``console`` which uses the formatter ``console``.\n", - " * A logger with the name of this application set to ``DEBUG``\n", - " level.\n", - " This example adds a new handler that writes to a file:\n", - " .. code-block:: python\n", - " c.Application.logging_config = {\n", - " 'handlers': {\n", - " 'file': {\n", - " 'class': 'logging.FileHandler',\n", - " 'level': 'DEBUG',\n", - " 'filename': '',\n", - " }\n", - " },\n", - " 'loggers': {\n", - " '': {\n", - " 'level': 'DEBUG',\n", - " # NOTE: if you don't list the default \"console\"\n", - " # handler here then it will be disabled\n", - " 'handlers': ['console', 'file'],\n", - " },\n", - " }\n", - " }\n", - " Default: {}\n", - "--Tool.provenance_log=\n", - " Default: traitlets.Undefined\n", - "--Tool.quiet=\n", - " Default: False\n", - "--Tool.show_config=\n", - " Instead of starting the Application, dump configuration to stdout\n", - " Default: False\n", - "--Tool.show_config_json=\n", - " Instead of starting the Application, dump configuration to stdout (as JSON)\n", - " Default: False\n", - "\n", - "MyTool(Tool) options\n", - "--------------------\n", - "--MyTool.config_files=...\n", - " Default: []\n", - "--MyTool.iterations=\n", - " Number of times to run\n", - " Default: 5\n", - "--MyTool.log_config==...\n", - " Default: {}\n", - "--MyTool.log_datefmt=\n", - " The date format used by logging formatters for %(asctime)s\n", - " Default: '%Y-%m-%d %H:%M:%S'\n", - "--MyTool.log_file=\n", - " Filename for the log\n", - " Default: None\n", - "--MyTool.log_file_level=\n", - " Logging Level for File Logging\n", - " Choices: any of [0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL']\n", - " Default: 'INFO'\n", - "--MyTool.log_format=\n", - " The Logging format template\n", - " Default: '[%(name)s]%(highlevel)s %(message)s'\n", - "--MyTool.log_level=\n", - " Set the log level by value or name.\n", - " Choices: any of [0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL']\n", - " Default: 30\n", - "--MyTool.logging_config==...\n", - " Configure additional log handlers.\n", - " The default stderr logs handler is configured by the log_level, log_datefmt\n", - " and log_format settings.\n", - " This configuration can be used to configure additional handlers (e.g. to\n", - " output the log to a file) or for finer control over the default handlers.\n", - " If provided this should be a logging configuration dictionary, for more\n", - " information see:\n", - " https://docs.python.org/3/library/logging.config.html#logging-config-\n", - " dictschema\n", - " This dictionary is merged with the base logging configuration which defines\n", - " the following:\n", - " * A logging formatter intended for interactive use called\n", - " ``console``.\n", - " * A logging handler that writes to stderr called\n", - " ``console`` which uses the formatter ``console``.\n", - " * A logger with the name of this application set to ``DEBUG``\n", - " level.\n", - " This example adds a new handler that writes to a file:\n", - " .. code-block:: python\n", - " c.Application.logging_config = {\n", - " 'handlers': {\n", - " 'file': {\n", - " 'class': 'logging.FileHandler',\n", - " 'level': 'DEBUG',\n", - " 'filename': '',\n", - " }\n", - " },\n", - " 'loggers': {\n", - " '': {\n", - " 'level': 'DEBUG',\n", - " # NOTE: if you don't list the default \"console\"\n", - " # handler here then it will be disabled\n", - " 'handlers': ['console', 'file'],\n", - " },\n", - " }\n", - " }\n", - " Default: {}\n", - "--MyTool.provenance_log=\n", - " Default: traitlets.Undefined\n", - "--MyTool.quiet=\n", - " Default: False\n", - "--MyTool.show_config=\n", - " Instead of starting the Application, dump configuration to stdout\n", - " Default: False\n", - "--MyTool.show_config_json=\n", - " Instead of starting the Application, dump configuration to stdout (as JSON)\n", - " Default: False\n", - "\n", - "MyComponent(Component) options\n", - "------------------------------\n", - "--MyComponent.value=\n", - " Value to use\n", - " Default: -1\n", - "\n", - "AdvancedComponent(Component) options\n", - "------------------------------------\n", - "--AdvancedComponent.infile=\n", - " input file name\n", - " Default: traitlets.Undefined\n", - "--AdvancedComponent.outfile=\n", - " output file name\n", - " Default: traitlets.Undefined\n", - "--AdvancedComponent.value1=\n", - " Value to use\n", - " Default: -1\n", - "\n", - "SecondaryMyComponent(MyComponent) options\n", - "-----------------------------------------\n", - "--SecondaryMyComponent.value=\n", - " Value to use\n", - " Default: -1\n", - "\n", - "TelescopeWiseComponent(TelescopeComponent) options\n", - "--------------------------------------------------\n", - "--TelescopeWiseComponent.param=...\n", - " Something configurable with telescope patterns.\n", - " Default: [('type', '*', 5.0)]\n", - "\n" - ] - } - ], + "outputs": [], "source": [ "tool.print_help(classes=True)" ] @@ -1002,27 +306,11 @@ }, { "cell_type": "code", - "execution_count": 12, + "execution_count": null, "metadata": { - "execution": { - "iopub.execute_input": "2023-01-20T15:47:52.580003Z", - "iopub.status.busy": "2023-01-20T15:47:52.579625Z", - "iopub.status.idle": "2023-01-20T15:47:53.115772Z", - "shell.execute_reply": "2023-01-20T15:47:53.115222Z", - "shell.execute_reply.started": "2023-01-20T15:47:52.579981Z" - }, "tags": [] }, - "outputs": [ - { - "name": "stderr", - "output_type": "stream", - "text": [ - "2023-01-20 16:47:52,602 \u001b[1;33mWARNING\u001b[0m [__main__.mytool.AdvancedComponent] (3049709041.on_outfile_changed): Outfile was changed to '{'name': 'outfile', 'old': traitlets.Undefined, 'new': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/out.csv'), 'owner': <__main__.AdvancedComponent object at 0x7f1f80d00c10>, 'type': 'change'}'\n", - "2023-01-20 16:47:53,105 \u001b[1;33mWARNING\u001b[0m [__main__.mytool] (462504653.finish): Shutting down.\n" - ] - } - ], + "outputs": [], "source": [ "try:\n", " tool.run(argv=[\"--infile\", str(GAMMA_FILE), \"--outfile\", \"out.csv\"])\n", @@ -1032,36 +320,9 @@ }, { "cell_type": "code", - "execution_count": 13, - "metadata": { - "execution": { - "iopub.execute_input": "2023-01-20T15:47:53.116897Z", - "iopub.status.busy": "2023-01-20T15:47:53.116728Z", - "iopub.status.idle": "2023-01-20T15:47:53.460013Z", - "shell.execute_reply": "2023-01-20T15:47:53.459533Z", - "shell.execute_reply.started": "2023-01-20T15:47:53.116881Z" - } - }, - "outputs": [ - { - "name": "stderr", - "output_type": "stream", - "text": [ - "2023-01-20 16:47:53,123 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.initialize): Loading config from '[]'\n", - "2023-01-20 16:47:53,125 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.initialize): ctapipe version 0.17.1.dev457+ga222c281.d20230120\n", - "2023-01-20 16:47:53,125 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.run): Starting: mytool\n", - "2023-01-20 16:47:53,146 \u001b[1;33mWARNING\u001b[0m [__main__.mytool.AdvancedComponent] (3049709041.on_outfile_changed): Outfile was changed to '{'name': 'outfile', 'old': traitlets.Undefined, 'new': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/out.csv'), 'owner': <__main__.AdvancedComponent object at 0x7f1f80d009d0>, 'type': 'change'}'\n", - "2023-01-20 16:47:53,148 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (462504653.start): Performing 3 iterations...\n", - "2023-01-20 16:47:53,149 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (462504653.start): ITERATION 0\n", - "2023-01-20 16:47:53,249 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (462504653.start): ITERATION 1\n", - "2023-01-20 16:47:53,350 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (462504653.start): ITERATION 2\n", - "2023-01-20 16:47:53,451 \u001b[1;33mWARNING\u001b[0m [__main__.mytool] (462504653.finish): Shutting down.\n", - "2023-01-20 16:47:53,452 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.run): Finished: mytool\n", - "2023-01-20 16:47:53,453 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.write_provenance): Output: \n", - "2023-01-20 16:47:53,454 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.write_provenance): Output: \n" - ] - } - ], + "execution_count": null, + "metadata": {}, + "outputs": [], "source": [ "tool.log_format = \"%(asctime)s : %(levelname)s [%(name)s %(funcName)s] %(message)s\"\n", "\n", @@ -1092,3330 +353,11 @@ }, { "cell_type": "code", - "execution_count": 14, + "execution_count": null, "metadata": { - 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"execution_count": 15, + "execution_count": null, "metadata": { - "execution": { - "iopub.execute_input": "2023-01-20T15:47:56.667197Z", - "iopub.status.busy": "2023-01-20T15:47:56.666639Z", - "iopub.status.idle": "2023-01-20T15:47:56.804892Z", - "shell.execute_reply": "2023-01-20T15:47:56.804482Z", - "shell.execute_reply.started": "2023-01-20T15:47:56.667178Z" - }, "tags": [] }, - "outputs": [ - { - "name": "stderr", - "output_type": "stream", - "text": [ - "2023-01-20 16:47:56,690 \u001b[1;33mWARNING\u001b[0m [__main__.mytool.AdvancedComponent] (3049709041.on_outfile_changed): Outfile was changed to '{'name': 'outfile', 'old': traitlets.Undefined, 'new': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/out.csv'), 'owner': <__main__.AdvancedComponent object at 0x7f1f898c65e0>, 'type': 'change'}'\n", - "2023-01-20 16:47:56,792 \u001b[1;33mWARNING\u001b[0m [__main__.mytool] (462504653.finish): Shutting down.\n" - ] - } - ], + "outputs": [], "source": [ "tool.iterations = 1\n", "tool.log_level = 0\n", @@ -4481,25 +407,9 @@ }, { "cell_type": "code", - "execution_count": 16, - "metadata": { - "execution": { - "iopub.execute_input": "2023-01-20T15:47:58.188741Z", - "iopub.status.busy": "2023-01-20T15:47:58.188509Z", - "iopub.status.idle": "2023-01-20T15:47:58.192330Z", - "shell.execute_reply": "2023-01-20T15:47:58.191863Z", - "shell.execute_reply.started": "2023-01-20T15:47:58.188724Z" - } - }, - "outputs": [ - { - "name": "stdout", - "output_type": "stream", - "text": [ - "bad value: The 'iterations' trait of a MyTool instance expected an int, not the str 'badval'.\n" - ] - } - ], + "execution_count": null, + "metadata": {}, + "outputs": [], "source": [ "try:\n", " tool.iterations = \"badval\"\n", @@ -4518,25 +428,9 @@ }, { "cell_type": "code", - "execution_count": 17, - "metadata": { - "execution": { - "iopub.execute_input": "2023-01-20T15:47:59.387165Z", - "iopub.status.busy": "2023-01-20T15:47:59.386478Z", - "iopub.status.idle": "2023-01-20T15:47:59.390065Z", - "shell.execute_reply": "2023-01-20T15:47:59.389730Z", - "shell.execute_reply.started": "2023-01-20T15:47:59.387147Z" - } - }, - "outputs": [ - { - "name": "stderr", - "output_type": "stream", - "text": [ - "2023-01-20 16:47:59,388 \u001b[1;33mWARNING\u001b[0m [__main__.mytool.AdvancedComponent] (3049709041.on_outfile_changed): Outfile was changed to '{'name': 'outfile', 'old': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/out.csv'), 'new': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/Another.txt'), 'owner': <__main__.AdvancedComponent object at 0x7f1f898c65e0>, 'type': 'change'}'\n" - ] - } - ], + "execution_count": null, + "metadata": {}, + "outputs": [], "source": [ "tool.advanced.outfile = \"Another.txt\"" ] @@ -4557,16 +451,8 @@ }, { "cell_type": "code", - "execution_count": 18, - "metadata": { - "execution": { - "iopub.execute_input": "2023-01-20T15:48:01.554890Z", - "iopub.status.busy": "2023-01-20T15:48:01.554712Z", - "iopub.status.idle": "2023-01-20T15:48:01.559148Z", - "shell.execute_reply": "2023-01-20T15:48:01.558705Z", - "shell.execute_reply.started": "2023-01-20T15:48:01.554873Z" - } - }, + "execution_count": null, + "metadata": {}, "outputs": [], "source": [ "tool2 = MyTool()" @@ -4574,5528 +460,12 @@ }, { "cell_type": "code", - "execution_count": 19, + "execution_count": null, "metadata": { - "execution": { - "iopub.execute_input": "2023-01-20T15:48:02.187182Z", - "iopub.status.busy": "2023-01-20T15:48:02.186764Z", - "iopub.status.idle": "2023-01-20T15:48:02.740658Z", - "shell.execute_reply": "2023-01-20T15:48:02.740189Z", - "shell.execute_reply.started": "2023-01-20T15:48:02.187166Z" - }, "scrolled": true, "tags": [] }, - "outputs": [ - { - "name": "stderr", - "output_type": "stream", - "text": [ - "2023-01-20 16:48:02,193 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.initialize): ctapipe version 0.17.1.dev457+ga222c281.d20230120\n", - "2023-01-20 16:48:02,194 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.run): Starting: mytool\n", - "2023-01-20 16:48:02,212 \u001b[1;33mWARNING\u001b[0m [__main__.mytool.AdvancedComponent] (3049709041.on_outfile_changed): Outfile was changed to '{'name': 'outfile', 'old': traitlets.Undefined, 'new': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/foo.txt'), 'owner': <__main__.AdvancedComponent object at 0x7f2009adee50>, 'type': 'change'}'\n", - "2023-01-20 16:48:02,214 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool] (tool.run): CONFIG: {'MyTool': {'config_files': [PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/Tools.json')], 'iterations': 5, 'log_config': {}, 'log_datefmt': '%Y-%m-%d %H:%M:%S', 'log_file': None, 'log_file_level': 'INFO', 'log_format': '[%(name)s]%(highlevel)s %(message)s', 'log_level': 10, 'logging_config': {}, 'provenance_log': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/mytool.provenance.log'), 'quiet': False, 'show_config': False, 'show_config_json': False, 'MyComponent': {'value': -1}, 'SecondaryMyComponent': {'value': -1}, 'TelescopeWiseComponent': {'param': [('type', '*', 5.0)]}, 'AdvancedComponent': {'infile': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/something.txt'), 'outfile': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/foo.txt'), 'value1': -1, 'MyComponent': {'value': -1}}}}\n", - "2023-01-20 16:48:02,214 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (462504653.start): Performing 5 iterations...\n", - "2023-01-20 16:48:02,215 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (462504653.start): ITERATION 0\n", - "2023-01-20 16:48:02,215 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.MyComponent] (3049709041.do_thing): Did thing\n", - "2023-01-20 16:48:02,215 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.SecondaryMyComponent] (3049709041.do_thing): Did thing\n", - "2023-01-20 16:48:02,316 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (462504653.start): ITERATION 1\n", - "2023-01-20 16:48:02,316 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.MyComponent] (3049709041.do_thing): Did thing\n", - "2023-01-20 16:48:02,317 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.SecondaryMyComponent] (3049709041.do_thing): Did thing\n", - "2023-01-20 16:48:02,417 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (462504653.start): ITERATION 2\n", - "2023-01-20 16:48:02,418 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.MyComponent] (3049709041.do_thing): Did thing\n", - "2023-01-20 16:48:02,418 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.SecondaryMyComponent] (3049709041.do_thing): Did thing\n", - "2023-01-20 16:48:02,519 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (462504653.start): ITERATION 3\n", - "2023-01-20 16:48:02,519 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.MyComponent] (3049709041.do_thing): Did thing\n", - "2023-01-20 16:48:02,519 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.SecondaryMyComponent] (3049709041.do_thing): Did thing\n", - "2023-01-20 16:48:02,620 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (462504653.start): ITERATION 4\n", - "2023-01-20 16:48:02,620 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.MyComponent] (3049709041.do_thing): Did thing\n", - "2023-01-20 16:48:02,621 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool.SecondaryMyComponent] (3049709041.do_thing): Did thing\n", - "2023-01-20 16:48:02,721 \u001b[1;33mWARNING\u001b[0m [__main__.mytool] (462504653.finish): Shutting down.\n", - "2023-01-20 16:48:02,722 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.run): Finished: mytool\n", - "2023-01-20 16:48:02,724 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.write_provenance): Output: \n", - "2023-01-20 16:48:02,724 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.write_provenance): Output: \n", - "2023-01-20 16:48:02,724 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.write_provenance): Output: \n", - "2023-01-20 16:48:02,725 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.write_provenance): Output: \n", - "2023-01-20 16:48:02,725 \u001b[1;32mINFO\u001b[0m [__main__.mytool] (tool.write_provenance): Output: \n", - "2023-01-20 16:48:02,730 \u001b[1;34mDEBUG\u001b[0m [__main__.mytool] (tool.write_provenance): PROVENANCE: '[\n", - " {\n", - " \"activity_name\": \"mytool\",\n", - " \"activity_uuid\": \"21472903-b1d8-4648-97ae-83284fc2c11c\",\n", - " \"start\": {\n", - " \"time_utc\": \"2023-01-20T15:47:52.586\"\n", - " },\n", - " \"stop\": {\n", - " \"time_utc\": \"2023-01-20T15:47:53.106\"\n", - " },\n", - " \"system\": {\n", - " \"ctapipe_version\": \"0.17.1.dev457+ga222c281.d20230120\",\n", - " \"ctapipe_resources_version\": \"not installed\",\n", - " \"eventio_version\": \"1.11.0\",\n", - 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" 5.0)])},\n", - " 'AdvancedComponent': {'infile': PosixPath('/home/tb273079/.cache/ctapipe/cccta-dataserver.in2p3.fr/data/ctapipe-test-data/v1.1.0/gamma_prod5.simtel.zst'),\n", - " 'outfile': PosixPath('/local/home/tb273079/DataPipe/ctapipe-dev/docs/examples/out.csv'),\n", - " 'value1': -1,\n", - " 'MyComponent': {'value': -1}}}}" - ] - }, - "execution_count": 32, - "metadata": {}, - "output_type": "execute_result" - } - ], + "execution_count": null, + "metadata": {}, + "outputs": [], "source": [ "tool.iterations = 12\n", "tool.get_current_config()" @@ -10711,246 +603,9 @@ }, { "cell_type": "code", - "execution_count": 33, - "metadata": { - "execution": { - "iopub.execute_input": "2023-01-20T15:48:24.532240Z", - "iopub.status.busy": "2023-01-20T15:48:24.532014Z", - "iopub.status.idle": "2023-01-20T15:48:24.544572Z", - "shell.execute_reply": "2023-01-20T15:48:24.544100Z", - "shell.execute_reply.started": "2023-01-20T15:48:24.532224Z" - } - }, - "outputs": [ - { - "name": "stdout", - "output_type": "stream", - "text": [ - "# Configuration file for mytool.\n", - "\n", - "c = get_config() # noqa\n", - "\n", - "#------------------------------------------------------------------------------\n", - "# Application(SingletonConfigurable) configuration\n", - "#------------------------------------------------------------------------------\n", - "## This is an application.\n", - "\n", - "## The date format used by logging formatters for %(asctime)s\n", - "# Default: '%Y-%m-%d %H:%M:%S'\n", - "# c.Application.log_datefmt = '%Y-%m-%d %H:%M:%S'\n", - "\n", - "## The Logging format template\n", - "# Default: '[%(name)s]%(highlevel)s %(message)s'\n", - "# c.Application.log_format = '[%(name)s]%(highlevel)s %(message)s'\n", - "\n", - "## Set the log level by value or name.\n", - "# Choices: any of [0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL']\n", - "# Default: 30\n", - "# c.Application.log_level = 30\n", - "\n", - "## Configure additional log handlers.\n", - "# \n", - "# The default stderr logs handler is configured by the log_level, log_datefmt\n", - "# and log_format settings.\n", - "# \n", - "# This configuration can be used to configure additional handlers (e.g. to\n", - "# output the log to a file) or for finer control over the default handlers.\n", - "# \n", - "# If provided this should be a logging configuration dictionary, for more\n", - "# information see:\n", - "# https://docs.python.org/3/library/logging.config.html#logging-config-\n", - "# dictschema\n", - "# \n", - "# This dictionary is merged with the base logging configuration which defines\n", - "# the following:\n", - "# \n", - "# * A logging formatter intended for interactive use called\n", - "# ``console``.\n", - "# * A logging handler that writes to stderr called\n", - "# ``console`` which uses the formatter ``console``.\n", - "# * A logger with the name of this application set to ``DEBUG``\n", - "# level.\n", - "# \n", - "# This example adds a new handler that writes to a file:\n", - "# \n", - "# .. code-block:: python\n", - "# \n", - "# c.Application.logging_config = {\n", - "# 'handlers': {\n", - "# 'file': {\n", - "# 'class': 'logging.FileHandler',\n", - "# 'level': 'DEBUG',\n", - "# 'filename': '',\n", - "# }\n", - "# },\n", - "# 'loggers': {\n", - "# '': {\n", - "# 'level': 'DEBUG',\n", - "# # NOTE: if you don't list the default \"console\"\n", - "# # handler here then it will be disabled\n", - "# 'handlers': ['console', 'file'],\n", - "# },\n", - "# }\n", - "# }\n", - "# Default: {}\n", - "# c.Application.logging_config = {}\n", - "\n", - "## Instead of starting the Application, dump configuration to stdout\n", - "# Default: False\n", - "# c.Application.show_config = False\n", - "\n", - "## Instead of starting the Application, dump configuration to stdout (as JSON)\n", - "# Default: False\n", - "# c.Application.show_config_json = False\n", - "\n", - "#------------------------------------------------------------------------------\n", - "# Tool(Application) configuration\n", - "#------------------------------------------------------------------------------\n", - "## This is an application.\n", - "\n", - "# Default: []\n", - "# c.Tool.config_files = []\n", - "\n", - "# Default: {}\n", - "# c.Tool.log_config = {}\n", - "\n", - "## The date format used by logging formatters for %(asctime)s\n", - "# See also: Application.log_datefmt\n", - "# c.Tool.log_datefmt = '%Y-%m-%d %H:%M:%S'\n", - "\n", - "## Filename for the log\n", - "# Default: None\n", - "# c.Tool.log_file = None\n", - "\n", - "## Logging Level for File Logging\n", - "# Choices: any of [0, 10, 20, 30, 40, 50, 'DEBUG', 'INFO', 'WARN', 'ERROR', 'CRITICAL']\n", - "# Default: 'INFO'\n", - "# c.Tool.log_file_level = 'INFO'\n", - "\n", - "## The Logging format template\n", - "# See also: Application.log_format\n", - "# c.Tool.log_format = '[%(name)s]%(highlevel)s %(message)s'\n", - "\n", - "## Set the log level by value or name.\n", - "# See also: Application.log_level\n", - "# c.Tool.log_level = 30\n", - "\n", - "## \n", - "# See also: Application.logging_config\n", - "# c.Tool.logging_config = {}\n", - "\n", - "# Default: traitlets.Undefined\n", - "# c.Tool.provenance_log = traitlets.Undefined\n", - "\n", - "# Default: False\n", - "# c.Tool.quiet = False\n", - "\n", - "## Instead of starting the Application, dump configuration to stdout\n", - "# See also: Application.show_config\n", - "# c.Tool.show_config = False\n", - "\n", - "## Instead of starting the Application, dump configuration to stdout (as JSON)\n", - "# See also: Application.show_config_json\n", - "# c.Tool.show_config_json = False\n", - "\n", - "#------------------------------------------------------------------------------\n", - "# MyTool(Tool) configuration\n", - "#------------------------------------------------------------------------------\n", - "# See also: Tool.config_files\n", - "# c.MyTool.config_files = []\n", - "\n", - "## Number of times to run\n", - "# Default: 5\n", - "# c.MyTool.iterations = 5\n", - "\n", - "# See also: Tool.log_config\n", - "# c.MyTool.log_config = {}\n", - "\n", - "## The date format used by logging formatters for %(asctime)s\n", - "# See also: Application.log_datefmt\n", - "# c.MyTool.log_datefmt = '%Y-%m-%d %H:%M:%S'\n", - "\n", - "## Filename for the log\n", - "# See also: Tool.log_file\n", - "# c.MyTool.log_file = None\n", - "\n", - "## Logging Level for File Logging\n", - "# See also: Tool.log_file_level\n", - "# c.MyTool.log_file_level = 'INFO'\n", - "\n", - "## The Logging format template\n", - "# See also: Application.log_format\n", - "# c.MyTool.log_format = '[%(name)s]%(highlevel)s %(message)s'\n", - "\n", - "## Set the log level by value or name.\n", - "# See also: Application.log_level\n", - "# c.MyTool.log_level = 30\n", - "\n", - "## \n", - "# See also: Application.logging_config\n", - "# c.MyTool.logging_config = {}\n", - "\n", - "# See also: Tool.provenance_log\n", - "# c.MyTool.provenance_log = traitlets.Undefined\n", - "\n", - "# See also: Tool.quiet\n", - "# c.MyTool.quiet = False\n", - "\n", - "## Instead of starting the Application, dump configuration to stdout\n", - "# See also: Application.show_config\n", - "# c.MyTool.show_config = False\n", - "\n", - "## Instead of starting the Application, dump configuration to stdout (as JSON)\n", - "# See also: Application.show_config_json\n", - "# c.MyTool.show_config_json = False\n", - "\n", - "#------------------------------------------------------------------------------\n", - "# MyComponent(Component) configuration\n", - "#------------------------------------------------------------------------------\n", - "## A Component that does stuff\n", - "\n", - "## Value to use\n", - "# Default: -1\n", - "# c.MyComponent.value = -1\n", - "\n", - "#------------------------------------------------------------------------------\n", - "# AdvancedComponent(Component) configuration\n", - "#------------------------------------------------------------------------------\n", - "## An advanced technique\n", - "\n", - "## input file name\n", - "# Default: traitlets.Undefined\n", - "# c.AdvancedComponent.infile = traitlets.Undefined\n", - "\n", - "## output file name\n", - "# Default: traitlets.Undefined\n", - "# c.AdvancedComponent.outfile = traitlets.Undefined\n", - "\n", - "## Value to use\n", - "# Default: -1\n", - "# c.AdvancedComponent.value1 = -1\n", - "\n", - "#------------------------------------------------------------------------------\n", - "# SecondaryMyComponent(MyComponent) configuration\n", - "#------------------------------------------------------------------------------\n", - "## A second component\n", - "\n", - "## Value to use\n", - "# See also: MyComponent.value\n", - "# c.SecondaryMyComponent.value = -1\n", - "\n", - "#------------------------------------------------------------------------------\n", - "# TelescopeWiseComponent(TelescopeComponent) configuration\n", - "#------------------------------------------------------------------------------\n", - "## a component that contains parameters that are per-telescope configurable\n", - "\n", - "## Something configurable with telescope patterns.\n", - "# Default: [('type', '*', 5.0)]\n", - "# c.TelescopeWiseComponent.param = [('type', '*', 5.0)]\n", - "\n" - ] - } - ], + "execution_count": null, + "metadata": {}, + "outputs": [], "source": [ "print(tool.generate_config_file())" ] From 29e5d16680f84ad974d22946dd09bb579c801e55 Mon Sep 17 00:00:00 2001 From: Tomas Bylund Date: Tue, 24 Jan 2023 14:45:26 +0100 Subject: [PATCH 3/3] Fixed typo --- docs/ctapipe_api/tools/index.rst | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/ctapipe_api/tools/index.rst b/docs/ctapipe_api/tools/index.rst index dfbfde9f367..0d1c2dc8e6d 100644 --- a/docs/ctapipe_api/tools/index.rst +++ b/docs/ctapipe_api/tools/index.rst @@ -55,7 +55,7 @@ To create a new command-line Tool, follow the following procedure: 1. make a subclass of `ctapipe.core.Tool` 2. define any user-configurable parameters of the tool 3. register *all* configurable `ctapipe.core.Component` classes - that you want to be configured via the the Tool via its ``classes`` attribute + that you want to be configured via the Tool via its ``classes`` attribute 4. use the ``aliases`` attribute to promote any parameters from one of the sub-Components to a high-level a command-line parameter (they can still be specified using the advanced command-line command