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fs_unsup_spfs_single_func.m
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fs_unsup_spfs_single_func.m
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function [FeaNumCandi,res_gs,res_aio, res_gs_ps] = fs_unsup_spfs_single_func(dataset, exp_settings, algo_settings)
%feature selection by SPFS
%======================setup===========================
FeaNumCandi = exp_settings.FeaNumCandi;
nKmeans = exp_settings.nKmeans;
prefix_mdcs = [];
if isfield(exp_settings, 'prefix_mdcs')
prefix_mdcs = exp_settings.prefix_mdcs;
end
%======================================================
disp(['dataset:',dataset]);
[X, Y] = extractXY(dataset);
[nSmp,nDim] = size(X);
nClass = length(unique(Y));
%================setup======================
s1 = optSigma(X);
tCandi = 2.^[-3:3] * s1.^2;
spfs_typeCandi = {'SFS', 'NES'};
nP = length(tCandi) * length(spfs_typeCandi);
paramCell = cell(nP, 1) ;
idx = 0;
for i1 = 1:length(tCandi)
for i2 = 1:length(spfs_typeCandi)
param = [];
param.t = tCandi(i1);
param.spfs_type = spfs_typeCandi{i2};
idx = idx + 1;
paramCell{idx} = param;
end
end
%===========================================
disp('get SPFS...');
t_start = clock;
Dist = EuDist2(X, X, 0);
feaSubsets = cell(length(paramCell), 1);
for i1 = 1:length(paramCell)
param = paramCell{i1};
param.nClass = nClass;
K = exp( - Dist / param.t);
index = fs_unsup_spfs(X, K, [], max(FeaNumCandi), param);
feaSubsets{i1,1} = index;
end
t_end = clock;
t1 = etime(t_end,t_start);
disp(['exe time: ',num2str(t1)]);
t_start = clock;
disp('evaluation ...');
res_aio = cell(length(paramCell), length(FeaNumCandi));
for i2 = 1:length(FeaNumCandi)
for i1 = 1:length(paramCell)
fprintf('SPFS parameter evaluation %d outof %d ... %d out of %d...\n', i2, length(FeaNumCandi), i1, length(paramCell));
idx = feaSubsets{i1,1};
res_aio{i1, i2} = evalUnSupFS(X, Y, idx(1:FeaNumCandi(i2)), struct('nKm', nKmeans));
end
end
[res_gs, res_gs_ps] = grid_search_fs(res_aio);
res_gs.feaset = FeaNumCandi;
t_end = clock;
t2 = etime(t_end,t_start);
disp(['exe time: ',num2str(t2)]);
res_gs.time = t1;
res_gs.time2 = t2;
save(fullfile(prefix_mdcs, [dataset, '_best_result_SPFS.mat']),'FeaNumCandi','res_gs','res_aio', 'res_gs_ps');
end