From 3071e8d41a5805430bb50a2e7080060347762c2d Mon Sep 17 00:00:00 2001 From: InfrPopGen Date: Mon, 23 Jan 2023 15:30:58 +0000 Subject: [PATCH] Added new lineage DW.1 from #1564 with 21 new sequence designations, and 0 updated --- lineage_notes.txt | 1 + lineages.csv | 21 +++++++++++++++++++++ pango_designation/alias_key.json | 1 + 3 files changed, 23 insertions(+) diff --git a/lineage_notes.txt b/lineage_notes.txt index 339d04e6..939c151c 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -1234,6 +1234,7 @@ BE.1.2 Alias of B.1.1.529.5.3.1.1.2, mainly found in Costa Rica and USA, from pa BE.1.1.2 Alias of B.1.1.529.5.3.1.1.1.2, Germany lineage, defined by ORF9b:S50L CC.1 Alias of B.1.1.529.5.3.1.1.1.2.1, Germany lineage, defined by S:N450D BE.1.2.1 Alias of B.1.1.529.5.3.1.1.2.1, Panama, Canada, USA, defined by S:V445A, from issue #1095 +DW.1 Alias of B.1.1.529.5.3.1.1.2.1.1 found mainly in Costa Rica, from pango-designation issue #1564 BE.1.3 Alias of B.1.1.529.5.3.1.1.3, Finland and Estonia lineage BE.1.4 Alias of B.1.1.529.5.3.1.1.4, America lineage, ORF1b:V1787I BE.1.4.1 Alias of B.1.1.529.5.3.1.1.4.1, S:A701V diff --git a/lineages.csv b/lineages.csv index 972e5f97..4dd1ddf2 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2135005,3 +2135005,24 @@ Gansu/GSCDC-012/2022,BA.5.2.50 Japan/IC-15412/2023,BA.5.2.50 Hunan/HuNCDC-1921/2022,BA.5.2.50 Gansu/GSCDC-020/2022,BA.5.2.50 +CostaRica/INC-8195-774823/2022,DW.1 +CostaRica/INC-8562-775913/2022,DW.1 +CostaRica/INC-7864-773104/2022,DW.1 +CostaRica/INC-8503-775632/2022,DW.1 +CostaRica/INC-8437-775634/2022,DW.1 +CostaRica/INC-8461-775753/2022,DW.1 +CostaRica/INC-8159-774472/2022,DW.1 +CostaRica/INC-7932-773100/2022,DW.1 +CostaRica/INC-8676-776195/2022,DW.1 +CostaRica/INC-8860-777711/2022,DW.1 +CostaRica/INC-8554-775846/2022,DW.1 +CostaRica/INC-8920-777889/2022,DW.1 +CostaRica/INC-8552-775824/2022,DW.1 +CostaRica/INC-8240-774485/2022,DW.1 +CostaRica/INC-7751-772393/2022,DW.1 +CostaRica/INC-7709-772245/2022,DW.1 +CostaRica/INC-7571-771689/2022,DW.1 +CostaRica/INC-8042-774072/2022,DW.1 +CostaRica/INC-7744-772386/2022,DW.1 +CostaRica/INC-8239-774480/2022,DW.1 +CostaRica/INC-7934-773103/2022,DW.1 diff --git a/pango_designation/alias_key.json b/pango_designation/alias_key.json index cb9e5aa7..0f097533 100644 --- a/pango_designation/alias_key.json +++ b/pango_designation/alias_key.json @@ -105,6 +105,7 @@ "DT": "B.1.1.529.5.3.1.1.1.1.1.1.32", "DU": "B.1.1.529.5.3.1.1.1.1.1.1.2", "DV": "B.1.1.529.2.75.3.4.1.1.1.1.1", + "DW": "B.1.1.529.5.3.1.1.2.1", "XA": ["B.1.1.7","B.1.177"], "XB": ["B.1.634","B.1.631"], "XC": ["AY.29","B.1.1.7"],