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XEC.12: XEC + S:G252S (39 in 17 places 6 countries ) #2837

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Fearuncle opened this issue Dec 9, 2024 · 2 comments
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XEC.12: XEC + S:G252S (39 in 17 places 6 countries ) #2837

Fearuncle opened this issue Dec 9, 2024 · 2 comments

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@Fearuncle
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From: sars-cov-2-variants/lineage-proposals#1993
image
tree: https://nextstrain.org/fetch/genome.ucsc.edu/trash/hgPhyloPlace/subtreeAuspice1_genome_6fd3_649140.json?f_userOrOld=uploaded%20sample

First Seq: 2024-08-12
Most Recent: 2024-11-25

Gisaid: G22316A, T25039C,T3565C

EPI_ISL_19463997 EPI_ISL_19516810 EPI_ISL_19589221 PQ416267.1 PQ454466.1 EPI_ISL_19408525 PQ508455.1 PQ624027.1

@FedeGueli
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FedeGueli commented Dec 10, 2024

Designated XEC.12 via 58afeb2

@Fearuncle Fearuncle changed the title XEC + S:G252S (39 in 17 places 6 countries ) XEC.12: XEC + S:G252S (39 in 17 places 6 countries ) Dec 10, 2024
@FedeGueli
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cc @xz-keg
There are now a couple of potentially interesting branhes of XEC.12:
XEC.12>>C19884T > C12100A > A7381G, A24037G > T4579A, S:R190S (G22132T)
Query:A7381G, T4579A,G22132T
Samples: 3 Nebraska

XEC.12>>C19884T > C12100A > ORF1a:P971 (C3177T), Orf1a:H2794Y (C8645T), S:T345S (C22596G)
Query: C3177T, C8645T, C22596G
Samples: 1 England

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