Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

KP.3.1.1+Orf9b:T79I+S:D1260Y(196 seqs, >10 places) #2823

Closed
xz-keg opened this issue Nov 5, 2024 · 9 comments
Closed

KP.3.1.1+Orf9b:T79I+S:D1260Y(196 seqs, >10 places) #2823

xz-keg opened this issue Nov 5, 2024 · 9 comments

Comments

@xz-keg
Copy link
Contributor

xz-keg commented Nov 5, 2024

From sars-cov-2-variants/lineage-proposals#2094

KP.3.1.1+C28519T(Orf9b:T79I)+T13120C,G25340T(S:D1260Y)

Besides the spike and orf9b mutation, it is also worth noting that the T13120C mutation is just besides the A13121T mutation defining of KP.3.1.1.

GISAID query: C28519T, T13120C, G25340T
No. of seqs: 126(Denmark 1 France 2 Greece 1 Ireland 1 Netherlands 2 USA 34(CA, CO,GA, IA, MI, MN, NJ, NY, OH, VA) Canada 85(AB,BC,NB,NS,ON,QC))

First: EPI_ISL_19310503, Canada-QC, 2024-7-21
Latest: EPI_ISL_19521497, Canada-NB, 2024-10-21

usher
image

@xz-keg xz-keg changed the title KP.3.1.1+Orf9b:T79I+S:D1260Y(126 seqs, >10 places) KP.3.1.1+Orf9b:T79I+S:D1260Y(143 seqs, >10 places) Nov 10, 2024
@xz-keg
Copy link
Contributor Author

xz-keg commented Nov 15, 2024

149, also in UK

@xz-keg xz-keg changed the title KP.3.1.1+Orf9b:T79I+S:D1260Y(143 seqs, >10 places) KP.3.1.1+Orf9b:T79I+S:D1260Y(149 seqs, >10 places) Nov 15, 2024
@FedeGueli
Copy link
Contributor

FedeGueli commented Nov 15, 2024

Looking at non canadian samples it seems growing worth proposing it ah scratch already in this repo.

@Over-There-Is
Copy link
Contributor

174

@DailyCovidCases
Copy link

Now 174 seqs
@corneliusroemer This branch likely should be designated:
Screenshot (93)

@FedeGueli
Copy link
Contributor

181 now 27/29 in November are from Canada

@xz-keg xz-keg changed the title KP.3.1.1+Orf9b:T79I+S:D1260Y(149 seqs, >10 places) KP.3.1.1+Orf9b:T79I+S:D1260Y(196 seqs, >10 places) Dec 5, 2024
@Over-There-Is
Copy link
Contributor

203

@FedeGueli
Copy link
Contributor

209 with old samples from CA too. it is mostly a canadian lineage with limited spread in Denmark recently

@xz-keg
Copy link
Contributor Author

xz-keg commented Dec 11, 2024

MC.25

@FedeGueli
Copy link
Contributor

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

4 participants