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JN.1+S:R346T on C2395T branch (35 seqs, 4 countries) #2600

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DailyCovidCases opened this issue May 20, 2024 · 2 comments
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JN.1+S:R346T on C2395T branch (35 seqs, 4 countries) #2600

DailyCovidCases opened this issue May 20, 2024 · 2 comments

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@DailyCovidCases
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From branch 10 of sars-cov-2-variants/lineage-proposals#1089
JN.1 >G17562T > C2395T > S:R346T (G22599C)
Query: C2395T, G22599C,C18894T,-C1762A,-C774T,-
Samples : 35 (Ireland 1 Qatar 2 UK 28 USA 4)
First: OY989755.1, 2023-12-14
Latest: CLIMB-CM7YRJGO, 2024-04-26
usher
Screenshot (51)
@FedeGueli FedeGueli mentioned this issue May 21, 2024
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@DailyCovidCases DailyCovidCases closed this as not planned Won't fix, can't repro, duplicate, stale Jul 4, 2024
@DailyCovidCases
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Tree now:
usher
Screenshot (219)
@corneliusroemer Is this branch worth a designation?

@FedeGueli
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Tree now: usher Screenshot (219) @corneliusroemer Is this branch worth a designation?

I didnt check but looking at the tree it is not monophyletic and the biggest branch (proposed here) seems dead

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@FedeGueli @DailyCovidCases