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JN.1+S:F456L on C6145T branch (94 seqs) #2585

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xz-keg opened this issue May 9, 2024 · 11 comments
Closed

JN.1+S:F456L on C6145T branch (94 seqs) #2585

xz-keg opened this issue May 9, 2024 · 11 comments

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@xz-keg
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xz-keg commented May 9, 2024 •
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From branch 9 of sars-cov-2-variants/lineage-proposals#1253

JN.1+C6145T+T22928C(S:F456L)

GISAID query: C6145T, T22928C,T22926C,T3565C,-2782,-5184,-18453,-G17334T,-A161G,-A1461G,-G1857T
No. of seqs: 56(Canada 2 Japan 23 Netherlands 1 China 2(1 from Japan) Singapore 1 South Korea 17 USA 6)

First: EPI_ISL_18843993, Japan, 2024-1-1
Latest: EPI_ISL_19095766, Singapore, 2024-4-16

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@xz-keg xz-keg mentioned this issue May 9, 2024
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@xz-keg
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xz-keg commented May 29, 2024

72, Australia, UK

@xz-keg xz-keg changed the title JN.1+S:F456L on C6145T branch (52 seqs, 7 countries) JN.1+S:F456L on C6145T branch (72 seqs, 9 countries) May 29, 2024
@xz-keg xz-keg changed the title JN.1+S:F456L on C6145T branch (72 seqs, 9 countries) JN.1+S:F456L on C6145T branch (79 seqs, 9 countries) Jun 9, 2024
@DailyCovidCases
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DailyCovidCases commented Jun 20, 2024 •
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87 seqs

@FedeGueli
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New query: C6145T, T22928C,T22926C,T3565C,-2782,-5184,-18453,-G17334T,-A161G,-A1461G,-G1857T finds 75

@xz-keg
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xz-keg commented Jul 8, 2024

94, Qatar, Kuwait, Malaysia, Ireland, Brazil

@xz-keg xz-keg changed the title JN.1+S:F456L on C6145T branch (79 seqs, 9 countries) JN.1+S:F456L on C6145T branch (94 seqs, 14 countries) Jul 8, 2024
@DailyCovidCases
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Tracked in tracker9

@xz-keg
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xz-keg commented Jul 16, 2024

82 using @FedeGueli 's new query

@xz-keg xz-keg changed the title JN.1+S:F456L on C6145T branch (94 seqs, 14 countries) JN.1+S:F456L on C6145T branch (82 seqs) Jul 16, 2024
@DailyCovidCases
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Now 109 seqs, not dead yet

@FedeGueli
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Now 109 seqs, not dead yet

83 with this: C6145T, T22928C,T22926C,T3565C,-2782,-5184,-18453,-G17334T,-A161G,-A1461G,-G1857T

@xz-keg xz-keg changed the title JN.1+S:F456L on C6145T branch (82 seqs) JN.1+S:F456L on C6145T branch (85 seqs) Jul 23, 2024
@xz-keg xz-keg changed the title JN.1+S:F456L on C6145T branch (85 seqs) JN.1+S:F456L on C6145T branch (88 seqs) Jul 30, 2024
@DailyCovidCases
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Please close it

@DailyCovidCases
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144 seqs now

@xz-keg
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xz-keg commented Aug 13, 2024

94, Russia

@xz-keg xz-keg changed the title JN.1+S:F456L on C6145T branch (88 seqs) JN.1+S:F456L on C6145T branch (94 seqs) Aug 13, 2024
@xz-keg xz-keg closed this as not planned Won't fix, can't repro, duplicate, stale Aug 15, 2024
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@xz-keg @FedeGueli @DailyCovidCases