Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

FL.2 (XBB.1.9.1+T4579A) with S:T478R (17 seqs on Usher) #1927

Closed
FedeGueli opened this issue Apr 20, 2023 · 0 comments
Closed

FL.2 (XBB.1.9.1+T4579A) with S:T478R (17 seqs on Usher) #1927

FedeGueli opened this issue Apr 20, 2023 · 0 comments
Labels
XBB proposed sublineage of XBB

Comments

@FedeGueli
Copy link
Contributor

While checking which branches of XBB.1.9.1/2 had already gained S:T478R i found one potentially interesting that likely arose in indonesia and has already been sampled in Singapore with further spike mutations.

Tree:
Schermata 2023-04-20 alle 21 40 24
https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice1_genome_test_4aaa_191de0.json?c=gt-S_478&label=id:node_5844281

Countries:
Schermata 2023-04-20 alle 21 41 01

Defining mutations
FL.2 >> A29086G > T21988C > S:T478R (A22995G)

Gisaid Query: A29086G ,T21988C , C22995G

Sequences : 10
EP EPI_ISL_17468574, EPI_ISL_17475359,
EPI_ISL_17496051I_ISL_17324400, EPI_ISL_17372734, EPI_ISL_17372736,
EPI_ISL_17389260, EPI_ISL_17412584, EPI_ISL_17432027,
EPI_ISL_17465903,

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
XBB proposed sublineage of XBB
Projects
None yet
Development

No branches or pull requests

2 participants