From fd6c39c77c1aa941759d9dfc746996074acba2a6 Mon Sep 17 00:00:00 2001 From: Cornelius Roemer Date: Tue, 17 Oct 2023 00:40:35 +0200 Subject: [PATCH] Designate HN.4 (ORF1a:T403I) with 400 seqs --- lineage_notes.txt | 1 + lineages.csv | 349 ++++++++++++++++++++++++++++++++++++++++++++++ 2 files changed, 350 insertions(+) diff --git a/lineage_notes.txt b/lineage_notes.txt index 54d422cc..83374cb0 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -2938,6 +2938,7 @@ HN.2 Alias of XBB.1.9.1.1.5.1.2, ORF1b:P223S HN.2.1 Alias of XBB.1.9.1.1.5.1.2.1, S:Q836R HN.3 Alias of XBB.1.9.1.1.5.1.3, S:S494P HN.3.1 Alias of XBB.1.9.1.1.5.1.3.1, S:E554D +HN.4 Alias of XBB.1.9.1.1.5.1.4, ORF1a:T403I FL.1.5.2 Alias of XBB.1.9.1.1.5.2, S:N481K, S:H681R, England/France/Denmark, from sars-cov-2-variants/lineage-proposals#614 FL.1.6 Alias of XBB.1.9.1.1.6, S:N481K, S:Q1208H, from sars-cov-2-variants/lineage-proposals#59 FL.1.7 Alias of XBB.1.9.1.1.7, S:478R, S:C1235F, Indonesia, from #1985 diff --git a/lineages.csv b/lineages.csv index 935f36be..cfa22686 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2479458,3 +2479458,352 @@ Canada/ON-KHS-23-06369-v1/2023,HN.3.1 Canada/ON-KHS-06604-v1/2023,HN.3.1 Canada/ON-KHS-23-06072-v1/2023,HN.3.1 Canada/ON-KHS-06749-v1/2023,HN.3.1 +Brunei/MGS-7123054720/2023,HN.4 +Brunei/MGS-7123054721/2023,HN.4 +Spain/HUNSC_ITER_150415923/2023,HN.4 +USA/NY-URMC-N6S1K068-1/2023,HN.4 +Japan/PG-564819/2023,HN.4 +Netherlands/GE-RIVM-131149/2023,HN.4 +Switzerland/GE-HUG-42510672/2023,HN.4 +Greece/NPHO-7590/2023,HN.4 +Switzerland/BE-IFIK-230911_os_04/2023,HN.4 +USA/CA-CDC-LC1058340/2023,HN.4 +USA/MN-CDC-VSX-A08832/2023,HN.4 +Kuwait/Jaber20438458/2023,HN.4 +USA/CA-CDPH-500117818/2023,HN.4 +USA/CA-CDPH-500117387/2023,HN.4 +USA/CA-CDPH-500117382/2023,HN.4 +USA/CA-CDPH-500117425/2023,HN.4 +USA/CA-CDPH-500117341/2023,HN.4 +USA/CA-CDPH-500116646/2023,HN.4 +Wales/CLIMB-CM7Y8QSC/2023,HN.4 +England/CLIMB-CM7YFOOY/2023,HN.4 +England/CLIMB-CM7YMZDX/2023,HN.4 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