From e67b451fba1b7cbf15ce23ad846942053cdebd8d Mon Sep 17 00:00:00 2001 From: Yat-sing Ng <38100637+Over-There-Is@users.noreply.github.com> Date: Mon, 21 Oct 2024 23:28:22 +0800 Subject: [PATCH] Update lineage_notes.txt --- lineage_notes.txt | 14 +++++++------- 1 file changed, 7 insertions(+), 7 deletions(-) diff --git a/lineage_notes.txt b/lineage_notes.txt index d3518b93..003bb01d 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -1202,8 +1202,8 @@ KP.2.22 Alias of B.1.1.529.2.86.1.1.11.1.2.22, S:S31del, ORF1a:V3718F KP.2.23 Alias of B.1.1.529.2.86.1.1.11.1.2.23, S:S31del, ORF3a:A110S, ORF8:G77S KP.2.24 Alias of B.1.1.529.2.86.1.1.11.1.2.24, S:S31del, C9286T, C14919T KP.2.25 Alias of B.1.1.529.2.86.1.1.11.1.2.25, ORF1a:P1803L, C14220T -KP.2.25.1 Alias of B.1.1.529.2.86.1.1.11.1.2.25.1, S:I934V, S:N30K, China -KP.2.25.2 Alias of B.1.1.529.2.86.1.1.11.1.2.25.2, S:K558N +KP.2.25.1 Alias of B.1.1.529.2.86.1.1.11.1.2.25.1, S:S30K, S:I934V, China +KP.2.25.2 Alias of B.1.1.529.2.86.1.1.11.1.2.25.2, S:F32del, S:K558N KP.2.25.3 Alias of B.1.1.529.2.86.1.1.11.1.2.25.2, S:P793S KP.2.26 Alias of B.1.1.529.2.86.1.1.11.1.2.26, S:T22N, S:S31P, S:K478T (on T25039C branch) KP.3 Alias of B.1.1.529.2.86.1.1.11.1.3, S:Q493E, from sars-cov-2-variants/lineage-proposals#1410 @@ -1222,7 +1222,7 @@ MC.8 Alias of B.1.1.529.2.86.1.1.11.1.3.1.1.8, C9803T MC.8.1 Alias of B.1.1.529.2.86.1.1.11.1.3.1.1.8.1, S:T572I MC.9 Alias of B.1.1.529.2.86.1.1.11.1.3.1.1.9, ORF3a:K75N, ORF1b:A1219S MC.10 Alias of B.1.1.529.2.86.1.1.11.1.3.1.1.10, C16332T -MC.10.1 Alias of B.1.1.529.2.86.1.1.11.1.3.1.1.10.1, S:A435S +MC.10.1 Alias of B.1.1.529.2.86.1.1.11.1.3.1.1.10.1, S:A435S, ORF9b:R47H MC.11 Alias of B.1.1.529.2.86.1.1.11.1.3.1.1.11, C17430T MC.11.1 Alias of B.1.1.529.2.86.1.1.11.1.3.1.1.11.1, S:S256L, Europe MC.12 Alias of B.1.1.529.2.86.1.1.11.1.3.1.1.12, S:G72E @@ -1284,8 +1284,8 @@ JN.1.13 Alias of B.1.1.529.2.86.1.1.13, S:A1087S, after C26894T, C25680T, USA, f JN.1.13.1 Alias of B.1.1.529.2.86.1.1.13.1, S:R346T, S:F59S, USA, from sars-cov-2-variants/lineage-proposals/issues/1386 KS.1 Alias of B.1.1.529.2.86.1.1.13.1.1, S:F456L (T22928C), from sars-cov-2-variants/lineage-proposals#1253 KS.1.1 Alias of B.1.1.529.2.86.1.1.13.1.1.1, S:T22N, Singapore/Taiwan/Canada, from sars-cov-2-variants/lineage-proposals#1565 -KS.1.1.1 Alias of B.1.1.529.2.86.1.1.13.1.1.1.1, Orf1a:T609I (C2091T), Orf1a:N470T (A1674C) -NC.1 Alias of B.1.1.529.2.86.1.1.13.1.1.1.1.1, S:R190S +KS.1.1.1 Alias of B.1.1.529.2.86.1.1.13.1.1.1.1, Orf1a:N470T (A1674C) , Orf1a:T609I (C2091T) +NC.1 Alias of B.1.1.529.2.86.1.1.13.1.1.1.1.1, S:R190S, Uzbekistan KS.1.1.2 Alias of B.1.1.529.2.86.1.1.13.1.1.1.2, ORF1a:L2146F, C19716T KS.1.2 Alias of B.1.1.529.2.86.1.1.13.1.1.2, S:T678I, Russia KS.1.3 Alias of B.1.1.529.2.86.1.1.13.1.1.3, S:V642A, Dominican Republic @@ -1325,7 +1325,7 @@ LF.8.1.1 Alias of B.1.1.529.2.86.1.1.16.1.8.1.1, S:T22N ND.1 Alias of B.1.1.529.2.86.1.1.16.1.8.1.1.1, ORF1a:L4391F ND.1.1 Alias of B.1.1.529.2.86.1.1.16.1.8.1.1.1.1, S:K478T ND.2 Alias of B.1.1.529.2.86.1.1.16.1.8.1.1.2, S:K478E -ND.3 Alias of B.1.1.529.2.86.1.1.16.1.8.1.1.3, S:K478I +ND.3 Alias of B.1.1.529.2.86.1.1.16.1.8.1.1.3, S:K478I, N:S23T, US/NZ LF.9 Alias of B.1.1.529.2.86.1.1.16.1.9, S:S60P LF.9.1 Alias of B.1.1.529.2.86.1.1.16.1.9.1, S:N185D JN.1.16.2 Alias of B.1.1.529.2.86.1.1.16.2, C4777T, from sars-cov-2-variants/lineage-proposals#1253 @@ -4301,7 +4301,7 @@ XEG Recombinant lineage of JN.3.2.1, GJ.1.2, JN.3.2.1, GJ.1.2 (breakpoints: 2940 XEH Recombinant lineage of KP.1.1.3, KP.3 (breakpoint: 22599-23039), from #2790 XEJ Recombinant lineage of JN.1, LF.1.1.1 (breakpoint: 6574-16550), from #2786 XEK Recombinant lineage of KP.2.3, XEC (breakpoint: 9286-15402), from #2774 -XEL Recombinant lineage of KS.1.1.2, JN.1 (breakpoint: 22929-24820), from #2751 +XEL Recombinant lineage of KS.1.1.2, JN.1 (breakpoint: 22929-24820), South Korea, from #2751 *A.2.1 Withdrawn: Lineage with sequences predominantly from Panama *A.8 Withdrawn: Indian lineage merged with A.9 *A.10 Withdrawn: Spanish lineage reassigned to A.5