diff --git a/lineage_notes.txt b/lineage_notes.txt index 584cecbf..53e348b0 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -1327,7 +1327,7 @@ MK.3 Alias of B.1.1.529.2.86.1.1.11.1.3.1.6.3, S:R346T, S:H445R, from sars-cov-2 KP.3.1.7 Alias of B.1.1.529.2.86.1.1.11.1.3.1.7, S:L84I, from #2709 KP.3.1.8 Alias of B.1.1.529.2.86.1.1.11.1.3.1.8, S:F59S, A9235G, Georgia, from sars-cov-2-variants/lineage-proposals#1615 MY.1 Alias of B.1.1.529.2.86.1.1.11.1.3.1.8.1, S:P174S, ORF3a:T64I, Georgia -KP.3.1.9 Alias of B.1.1.529.2.86.1.1.11.1.3.1.9, S:N148S, S:P174S, from sars-cov-2-variants/lineage-proposals#2171 +KP.3.1.9 Alias of B.1.1.529.2.86.1.1.11.1.3.1.9, S:N148S, S:P174S, S:T22N, S:N30-,S:S31-,S:F32I from sars-cov-2-variants/lineage-proposals#2171 KP.3.1.10 Alias of B.1.1.529.2.86.1.1.11.1.3.1.10, S:N185D, ORF1a:V3917I, from sars-cov-2-variants/lineage-proposals#1853 KP.3.1.11 Alias of B.1.1.529.2.86.1.1.11.1.3.1.11, ORF1a:A2784V, T2583C, ORF1a:E452G, Spain NR.1 Alias of B.1.1.529.2.86.1.1.11.1.3.1.11.1, S:K679R, ORF1b:T250I diff --git a/lineages.csv b/lineages.csv index e6d5feb0..b9115e7a 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2576221,12 +2576221,6 @@ Canada/BC-BCCDC-734985/2024,MC.18 USA/RI-RIDOH-01518/2024,KP.3.1.9 USA/RI_SHL_01518/2024,KP.3.1.9 USA/RI-CDC-2-7958189/2024,KP.3.1.9 -USA/CA-SEARCH-140912/2024,KP.3.1.9 -USA/CA-SCPHL-24WGS00604/2024,KP.3.1.9 -USA/NY-PRL-241001_84C08/2024,KP.3.1.9 -USA/IVY-G88A72A6/2024,KP.3.1.9 -USA/PR-CVL-026690/2024,KP.3.1.9 -USA/CA-Stanford-196_S26/2024,KP.3.1.9 Switzerland/VS-SNRCI-HUG-45336206/2024,MC.14 Portugal/PT51425/2024,MC.14 Canada/QC-L00768247001/2024,MC.14 @@ -2591463,3 +2591457,51 @@ USA/TX-UHS-UTHSA12207-P0/2024,XEU USA/NY-PRL-241203_81A11/2024,XEU USA/OH-PLMI-WJ5-28670/2024,XEU USA/OH-PLMI-5DD-28768/2024,XEU +USA/CA-SEARCH-140912/2024,KP.3.1.9 +USA/CA-SCPHL-24WGS00604/2024,KP.3.1.9 +USA/NV-SNPHL-2410280017/2024,KP.3.1.9 +USA/NV-SNPHL-2410240138/2024,KP.3.1.9 +USA/NV-SNPHL-822178/2024,KP.3.1.9 +USA/NV-SNPHL-2410230200/2024,KP.3.1.9 +USA/NV-SNPHL-2410220037/2024,KP.3.1.9 +USA/NV-SNPHL-2410220095/2024,KP.3.1.9 +USA/NV-SNPHL-2410210127/2024,KP.3.1.9 +USA/NV-SNPHL-2410210151/2024,KP.3.1.9 +USA/NV-SNPHL-2410210074/2024,KP.3.1.9 +USA/NV-SNPHL-2410220244/2024,KP.3.1.9 +USA/NV-SNPHL-821885/2024,KP.3.1.9 +USA/NV-SNPHL-821555/2024,KP.3.1.9 +USA/NY-PRL-241001_84C08/2024,KP.3.1.9 +USA/NV-SNPHL-2410220096/2024,KP.3.1.9 +USA/NV-SNPHL-821886/2024,KP.3.1.9 +USA/NV-SNPHL-821878/2024,KP.3.1.9 +USA/NV-SNPHL-2410220003/2024,KP.3.1.9 +USA/NV-SNPHL-2410220112/2024,KP.3.1.9 +USA/NV-SNPHL-821881/2024,KP.3.1.9 +USA/NV-SNPHL-2410260002/2024,KP.3.1.9 +USA/IVY-G88A72A6/2024,KP.3.1.9 +USA/PR-CVL-026690/2024,KP.3.1.9 +USA/NV-NSPHL-24-S001298/2024,KP.3.1.9 +USA/IVY-G88A62W2/2024,KP.3.1.9 +USA/CA-Stanford-196_S26/2024,KP.3.1.9 +Singapore/R57MQ26/2024,KP.3.1.9 +USA/IA-SHL-2543112/2024,KP.3.1.9 +USA/CO-CDPHE-42383545/2024,KP.3.1.9 +USA/IL-CDC-2-8135768/2024,KP.3.1.9 +USA/CO-CDPHE-42384012/2024,KP.3.1.9 +USA/IL-CDC-2-8135305/2024,KP.3.1.9 +USA/2538053/2024,KP.3.1.9 +USA/CO-CDPHE-42384609/2024,KP.3.1.9 +USA/CO-CDPHE-42384720/2024,KP.3.1.9 +USA/IL-CDC-2-8135761/2024,KP.3.1.9 +USA/IL-CDC-2-8135391/2024,KP.3.1.9 +USA/CO-CDPHE-42481546/2024,KP.3.1.9 +USA/CO-CDPHE-42451967/2024,KP.3.1.9 +USA/IVY-G25Z09T8/2024,KP.3.1.9 +USA/IVY-G25Z09X8/2024,KP.3.1.9 +USA/CO-CDPHE-42410832/2024,KP.3.1.9 +USA/CO-CDPHE-42451976/2024,KP.3.1.9 +USA/CO-CDPHE-42383853/2024,KP.3.1.9 +USA/CO-CDPHE-42410919/2024,KP.3.1.9 +USA/CO-CDPHE-42410660/2024,KP.3.1.9 +USA/CO-CDPHE-42410917/2024,KP.3.1.9