From bb7eae79e76126dfed41c1af74ac6e7a239af4cf Mon Sep 17 00:00:00 2001 From: Cornelius Roemer Date: Sun, 12 Feb 2023 14:02:17 +0100 Subject: [PATCH] Added lineage ED.2 (ORF1a:D928Y) with 700 designations --- lineage_notes.txt | 1 + lineages.csv | 685 +++++++++++++++++++++++++++++++++++++++++++++- 2 files changed, 680 insertions(+), 6 deletions(-) diff --git a/lineage_notes.txt b/lineage_notes.txt index 17ddb99f..136cce05 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -1256,6 +1256,7 @@ BQ.1.1.16 Alias of B.1.1.529.5.3.1.1.1.1.1.1.16, England, S:Q607H BQ.1.1.17 Alias of B.1.1.529.5.3.1.1.1.1.1.1.17, France, ORF1a:S2273F BQ.1.1.18 Alias of B.1.1.529.5.3.1.1.1.1.1.1.18, France, C6541T ED.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.18.1, Japan, ORF3a:L108F, ORF1a:C433S +ED.2 Alias of B.1.1.529.5.3.1.1.1.1.1.1.18.1, USA, ORF1a:D928Y BQ.1.1.19 Alias of B.1.1.529.5.3.1.1.1.1.1.1.19, England, N:Q380H BQ.1.1.20 Alias of B.1.1.529.5.3.1.1.1.1.1.1.20, Denmark, S:144- and ORF3a:H204Y BQ.1.1.21 Alias of B.1.1.529.5.3.1.1.1.1.1.1.21, Switzerland/France, S:144- and A17946G diff --git a/lineages.csv b/lineages.csv index c0c6dff7..63dde945 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2116177,12 +2116177,6 @@ France/ARA-GENBIO-14292851784/2022,BQ.1.1.18 Belgium/UZA-UA-CV8433966609/2022,BQ.1.1.18 Switzerland/AG-Risch-1007R14060/2022,BQ.1.1.18 Switzerland/BE-IFIK-221010_os_58/2022,BQ.1.1.18 -USA/NJ-PHEL-V22044577/2022,BQ.1.1.18 -USA/WA-CDC-UW22100963560/2022,BQ.1.1.18 -USA/GA-CDC-STM-SU8RFVFUC/2022,BQ.1.1.18 -USA/TX-CDC-STM-PYEK2NYT5/2022,BQ.1.1.18 -USA/FL-CDC-STM-CXT5JDJYN/2022,BQ.1.1.18 -Belgium/ULG-28972/2022,BQ.1.1.18 France/HDF-cerba-22V0669396/2022,BQ.1.1.18 France/IDF-HMN-22102060568/2022,BQ.1.1.18 France/GES-IPP53071/2022,BQ.1.1.18 @@ -2197518,4 +2197512,683 @@ Japan/TKYkbm84379/2023,ED.1 Japan/TKYkbm84448/2023,ED.1 Japan/TKYkbm84799/2023,ED.1 Japan/PG-427712/2022,ED.1 +Canada/BC-BCCDC-585540/2023,ED.2 +Canada/BC-BCCDC-585504/2023,ED.2 +Canada/BC-BCCDC-585797/2023,ED.2 +Canada/BC-BCCDC-585900/2023,ED.2 +USA/NC-CDC-LC0992709/2023,ED.2 +Canada/BC-BCCDC-585936/2023,ED.2 +Canada/BC-BCCDC-585560/2023,ED.2 +Canada/BC-BCCDC-585426/2023,ED.2 +USA/WI-UW-14610/2022,ED.2 +Canada/BC-BCCDC-566839/2022,ED.2 +USA/WA-CDC-UW23011830709/2023,ED.2 +Canada/BC-BCCDC-577111/2022,ED.2 +Canada/BC-BCCDC-581358/2023,ED.2 +USA/MD-HP43145-PIDWGQXGTC/2023,ED.2 +USA/WA-CDC-UW23011372601/2023,ED.2 +USA/TX-CDC-QDX45277437/2022,ED.2 +USA/NC-CDC-LC0986952/2023,ED.2 +USA/GA-CDC-QDX45132029/2022,ED.2 +USA/NC-CDC-LC0966483/2022,ED.2 +USA/NC-CDC-LC0964990/2022,ED.2 +USA/NC-WakeMed-CORVASEQ-WM06170/2022,ED.2 +USA/CA-HLX-STM-C28S3EG5V/2022,ED.2 +USA/JW8866/2023,ED.2 +USA/JW8724/2022,ED.2 +USA/NC-CORVASEQ-UNC-8866/2023,ED.2 +USA/NC-CORVASEQ-UNC-8724/2022,ED.2 +USA/NC-CDC-LC0975823/2022,ED.2 +USA/WA-UW-22122127543/2022,ED.2 +USA/TX-HMH-MCoV-122265/2023,ED.2 +USA/CA-CDC-STM-2TSP7BRNP/2023,ED.2 +USA/MD-CDC-QDX44991134/2022,ED.2 +Canada/BC-BCCDC-589256/2023,ED.2 +Canada/BC-BCCDC-565771/2022,ED.2 +USA/CA-CDC-LC0989116/2023,ED.2 +USA/NC-CDC-LC0986050/2023,ED.2 +Canada/BC-BCCDC-581991/2023,ED.2 +Canada/BC-BCCDC-577172/2022,ED.2 +Canada/BC-BCCDC-581144/2023,ED.2 +Canada/BC-BCCDC-581657/2022,ED.2 +Canada/BC-BCCDC-581426/2023,ED.2 +Canada/BC-BCCDC-581134/2023,ED.2 +Canada/BC-BCCDC-589345/2023,ED.2 +USA/MD-CDC-QDX45132386/2022,ED.2 +USA/NC-CDC-LC0952223/2022,ED.2 +USA/CO-CDPHE-2103724531/2022,ED.2 +USA/CO-CDPHE-2103724768/2022,ED.2 +USA/CO-CDPHE-2103722620/2022,ED.2 +USA/NY-PRL-221205_01G06/2022,ED.2 +USA/NY-Wadsworth-22052822-01/2022,ED.2 +USA/FL-CDC-LC0946679/2022,ED.2 +USA/NC-CORVASEQ-1085-8285/2022,ED.2 +USA/CO-CDPHE-2103715894/2022,ED.2 +Canada/ON-PHL-22-53838/2022,ED.2 +USA/CO-CDPHE-2103728887/2022,ED.2 +USA/CO-CDC-LC0939975/2022,ED.2 +USA/NY-PRL-221121_01I08/2022,ED.2 +Spain/GA-CHUVI-51971726/2022,ED.2 +USA/NY-PRL-221111_00A21/2022,ED.2 +USA/WA-UW-22101862623/2022,ED.2 +Canada/ON-PHL-22-50197/2022,ED.2 +USA/PA-CDC-QDX43024136/2022,ED.2 +USA/NY-NYCPHL-015629/2022,ED.2 +USA/FL-CDC-QDX42698940/2022,ED.2 +USA/CA-CDC-LC0918489/2022,ED.2 +USA/AZ-ASU95320/2022,ED.2 +USA/CO-CDPHE-2103733770/2022,ED.2 +USA/CO-CDPHE-2103731103/2022,ED.2 +USA/NC-CDC-LC0955825/2022,ED.2 +USA/NC-CDC-LC0964455/2022,ED.2 +USA/CO-CDPHE-2103726128/2022,ED.2 +USA/CO-CDPHE-2103718923/2022,ED.2 +USA/NY-CUIMC-NP-13285/2022,ED.2 +USA/NC-CDC-LC0975991/2022,ED.2 +USA/CO-CDPHE-2103740641/2022,ED.2 +USA/CO-CDPHE-2103738742/2022,ED.2 +USA/NY-CDC-QDX44244904/2022,ED.2 +Canada/BC-BCCDC-562484/2022,ED.2 +Canada/BC-BCCDC-562492/2022,ED.2 +Canada/BC-BCCDC-565983/2022,ED.2 +Canada/BC-BCCDC-552940/2022,ED.2 +Canada/AB-ABPHL-88674/2022,ED.2 +USA/CO-CDPHE-2103730108/2022,ED.2 +England/PHEC-YY8W69U/2022,ED.2 +USA/CO-CDPHE-2103728695/2022,ED.2 +USA/CO-CDPHE-2103732688/2022,ED.2 +USA/NY-ASC-210991782/2022,ED.2 +Canada/BC-BCCDC-562421/2022,ED.2 +Canada/BC-BCCDC-549739/2022,ED.2 +Canada/BC-BCCDC-549978/2022,ED.2 +Canada/BC-BCCDC-550123/2022,ED.2 +Canada/AB-ABPHL-85526/2022,ED.2 +Canada/AB-ABPHL-85845/2022,ED.2 +USA/CA-HLX-STM-3Y93T4GT7/2022,ED.2 +USA/GA-ASC-210989137/2022,ED.2 +USA/CO-CDC-QDX43990664/2022,ED.2 +USA/CO-CDPHE-2103716654/2022,ED.2 +USA/CA-SC-275008/2022,ED.2 +USA/CO-CDPHE-2103720324/2022,ED.2 +USA/NY-PRL-221214_00B16/2022,ED.2 +USA/NC-CORVASEQ-1085-8321/2022,ED.2 +USA/FL-Curative-563641/2022,ED.2 +USA/NC-CDC-LC0928668/2022,ED.2 +Canada/ON-PHL-22-56573/2022,ED.2 +USA/CO-CDPHE-2103726133/2022,ED.2 +USA/NC-CDC-LC0955477/2022,ED.2 +USA/CO-CDPHE-2103720204/2022,ED.2 +USA/CO-CDPHE-2103727062/2022,ED.2 +USA/NY-PRL-221214_00D22/2022,ED.2 +USA/IL-CDC-LC0959406/2022,ED.2 +USA/NC-CDC-LC0957117/2022,ED.2 +USA/CO-CDPHE-2103720325/2022,ED.2 +USA/WA-CDC-UW22100963560/2022,ED.2 +USA/GA-CDC-STM-SU8RFVFUC/2022,ED.2 +USA/TX-CDC-STM-PYEK2NYT5/2022,ED.2 +Canada/AB-ABPHL-82582/2022,ED.2 +Canada/AB-ABPHL-83314/2022,ED.2 +USA/GA-CDC-STM-6EFJNS6TC/2022,ED.2 +USA/NY-NYCPHL-015463/2022,ED.2 +USA/FL-CDC-QDX42862048/2022,ED.2 +USA/HI-CDC-QDX42861646/2022,ED.2 +Canada/AB-ABPHL-83669/2022,ED.2 +USA/FL-CDC-QDX42958078/2022,ED.2 +USA/CO-CDC-LC0939040/2022,ED.2 +USA/FL-CDC-QDX43165595/2022,ED.2 +Canada/AB-ABPHL-84325/2022,ED.2 +Canada/AB-ABPHL-84261/2022,ED.2 +USA/NC-CDC-LC0930147/2022,ED.2 +USA/MO-CDC-QDX43386531/2022,ED.2 +PuertoRico/PR-CVL-009885/2022,ED.2 +USA/MN-ASC-210802845/2022,ED.2 +USA/TX-HMH-117926/2022,ED.2 +Canada/AB-ABPHL-84885/2022,ED.2 +USA/CO-CDPHE-2103716241/2022,ED.2 +USA/NY-CDC-LC0937001/2022,ED.2 +Canada/SK-RRPL-554481/2022,ED.2 +USA/FL-CDC-STM-CXT5JDJYN/2022,ED.2 +Canada/BC-BCCDC-566081/2022,ED.2 +Canada/BC-BCCDC-562476/2022,ED.2 +USA/NC-ECU-CORVASEQ-116424220/2022,ED.2 +Canada/BC-BCCDC-565673/2022,ED.2 +USA/CO-CDPHE-2103733439/2022,ED.2 +Canada/BC-BCCDC-562468/2022,ED.2 +Canada/BC-BCCDC-552930/2022,ED.2 +Canada/BC-BCCDC-546248/2022,ED.2 +Canada/BC-BCCDC-566188/2022,ED.2 +Germany/BY-RKI-I-1072264/2022,ED.2 +USA/FL-Curative-559063/2022,ED.2 +USA/NC-CORVASEQ-CLT-013464/2022,ED.2 +USA/NC-CORVASEQ-1085-8546-z/2022,ED.2 +Canada/BC-BCCDC-546249/2022,ED.2 +USA/UT-UPHL-221230493482/2022,ED.2 +USA/NC-ECU-CORVASEQ-116364108/2022,ED.2 +Canada/BC-BCCDC-553140/2022,ED.2 +USA/NC-CDC-LC0964656/2022,ED.2 +Germany/BW-RKI-I-1070265/2022,ED.2 +USA/NY-PRL-221214_01D22/2022,ED.2 +USA/NJ-PHEL-V22044577/2022,ED.2 +USA/NY-PRL-221214_01B16/2022,ED.2 +Canada/BC-BCCDC-566534/2022,ED.2 +USA/NC-CDC-LC0962736/2022,ED.2 +Canada/BC-BCCDC-565787/2022,ED.2 +USA/CO-CDPHE-2103728921/2022,ED.2 +USA/FL-ASC-210989763/2022,ED.2 +USA/CO-CDPHE-2103729951/2022,ED.2 +Canada/BC-BCCDC-566353/2022,ED.2 +Canada/BC-BCCDC-566080/2022,ED.2 +USA/FL-ASC-210989762/2022,ED.2 +USA/CO-CDPHE-2103730244/2022,ED.2 +Germany/BW-RKI-I-1070286/2022,ED.2 +Canada/BC-BCCDC-566535/2022,ED.2 +Canada/BC-BCCDC-566136/2022,ED.2 +Canada/BC-BCCDC-566720/2022,ED.2 +Canada/BC-BCCDC-553283/2022,ED.2 +USA/MI-MDHHS-SC43582/2023,ED.2 +USA/CA-CDC-LC0944579/2022,ED.2 +USA/CA-CDC-STM-A7BK7ZZMU/2023,ED.2 +USA/MA-CDCBI-CRSP_6QPHGFBEJJAZ7TKD/2022,ED.2 +USA/IL-ASC-210990741/2022,ED.2 +USA/MA-CDCBI-CRSP_XSX2B5FTBN7MVPL2/2022,ED.2 +USA/VA-CDC-QDX43796037/2022,ED.2 +USA/VA-CDC-QDX43796036/2022,ED.2 +USA/NC-CDC-LC0969768/2022,ED.2 +USA/FL-CDC-QDX44067693/2022,ED.2 +USA/CO-CDPHE-2103728996/2022,ED.2 +USA/CO-CDC-QDX43583514/2022,ED.2 +USA/MD-CDC-QDX44483918/2022,ED.2 +USA/NC-CDC-LC0957999/2022,ED.2 +USA/CA-OC-4246/2022,ED.2 +USA/VA-CDC-LC0990564/2023,ED.2 +USA/NC-CDC-LC0990019/2023,ED.2 +USA/CO-CDPHE-2103756997/2022,ED.2 +USA/CO-CDPHE-2103743810/2022,ED.2 +USA/CO-CDPHE-2103743518/2022,ED.2 +USA/CO-CDC-LC0965926/2022,ED.2 +Canada/BC-BCCDC-565770/2022,ED.2 +Canada/BC-BCCDC-565973/2022,ED.2 +Canada/BC-BCCDC-585972/2023,ED.2 +Canada/BC-BCCDC-589232/2023,ED.2 +Canada/BC-BCCDC-585743/2023,ED.2 +Canada/BC-BCCDC-585742/2023,ED.2 +USA/CO-CDPHE-2103728664/2022,ED.2 +USA/CO-CDPHE-2103730004/2022,ED.2 +USA/CO-CDC-LC0939039/2022,ED.2 +USA/TX-CDC-LC0994979/2023,ED.2 +USA/MI-UM-10016895214/2022,ED.2 +USA/FL-TGH-4431/2022,ED.2 +Canada/BC-BCCDC-585556/2023,ED.2 +Canada/BC-BCCDC-585537/2023,ED.2 +Canada/BC-BCCDC-589425/2023,ED.2 +USA/CA-CDC-QDX42861450/2022,ED.2 +USA/CA-CDC-QDX42861279/2022,ED.2 +USA/MI-CDC-STM-BYD78YDPM/2022,ED.2 +USA/GA-CDC-STM-TXW6MJYE4/2022,ED.2 +USA/GA-CDC-STM-FFPFGXFQF/2022,ED.2 +USA/GA-CDC-STM-3SB27BGGF/2022,ED.2 +USA/TX-CDC-LC0944155/2022,ED.2 +USA/TX-ASC-210785441/2022,ED.2 +USA/TX-CDC-QDX43990418/2022,ED.2 +USA/TX-CDC-LC0938944/2022,ED.2 +USA/NC-CORVASEQ-UNC-8916/2023,ED.2 +USA/JW8897/2023,ED.2 +USA/JW8916/2023,ED.2 +USA/NC-CORVASEQ-UNC-8897/2023,ED.2 +Canada/AB-ABPHL-92094/2023,ED.2 +Ireland/D-NVRL-S22IRL00483757/2022,ED.2 +Ireland/D-NVRL-S22IRL00483471/2022,ED.2 +USA/NMDOH-2022154034/2022,ED.2 +USA/NM-CDC-LC0965710/2022,ED.2 +USA/NM-CDC-LC0965551/2022,ED.2 +USA/CO-CDPHE-2103725874/2022,ED.2 +USA/CO-CDPHE-2103738683/2022,ED.2 +USA/CO-CDPHE-2103738678/2022,ED.2 +USA/CO-CDPHE-2103720335/2022,ED.2 +USA/NY-Wadsworth-22061025-01/2022,ED.2 +USA/NY-Wadsworth-22061024-01/2022,ED.2 +USA/NY-Wadsworth-22064567-01/2022,ED.2 +USA/NY-Wadsworth-22064564-01/2022,ED.2 +USA/NY-Wadsworth-22061026-01/2022,ED.2 +USA/CT-CDCBI-CRSP_H5G4LYM7772S34VV/2023,ED.2 +Canada/ON-PHL-23-07894/2023,ED.2 +Canada/ON-PHL-22-59507/2022,ED.2 +Canada/AB-ABPHL-92041/2023,ED.2 +Canada/AB-ABPHL-92222/2023,ED.2 +Canada/BC-BCCDC-581917/2023,ED.2 +USA/WA-CDC-UW22121843990/2022,ED.2 +USA/WA-CDC-UW22121707910/2022,ED.2 +USA/WA-UW-22122882749/2022,ED.2 +USA/WA-UW-22122642113/2022,ED.2 +USA/CA-CDC-STM-VGCFU3F3Y/2023,ED.2 +USA/WA-PHL-032140/2022,ED.2 +USA/WA-CDC-UW43990/2022,ED.2 +USA/WA-CDC-UW23010982982/2023,ED.2 +USA/WA-UW-22122114863/2022,ED.2 +USA/SC-CDC-QDX45210218/2023,ED.2 +USA/OH-PLMI-HCF7G-15990/2022,ED.2 +USA/OH-PLMI-HCF7G-16022/2022,ED.2 +USA/OH-CDC-QDX44940515/2022,ED.2 +USA/OH-CDC-LC0973976/2022,ED.2 +USA/OH-PLMI-HCF7J-16179/2023,ED.2 +USA/OH-PLMI-HCF7G-16000/2022,ED.2 +USA/OH-PLMI-HCCNN-15844/2022,ED.2 +Ireland/MH-NVRL-S22IRL00479188/2022,ED.2 +Chile/BI-138004/2022,ED.2 +USA/FL-Curative-533785/2022,ED.2 +Sweden/DA10435048/2023,ED.2 +Sweden/1605961264/2023,ED.2 +Ireland/KE-NVRL-S22IRL00483720/2022,ED.2 +Ireland/OY-NVRL-ecS22IRL00478701/2022,ED.2 +Ireland/D-NVRL-S23IRL00005001/2023,ED.2 +Ireland/D-NVRL-S22IRL00484428/2022,ED.2 +Canada/BC-BCCDC-566031/2022,ED.2 +Canada/BC-BCCDC-566181/2022,ED.2 +Canada/BC-BCCDC-565719/2022,ED.2 +Canada/BC-BCCDC-585673/2023,ED.2 +Canada/BC-BCCDC-585515/2023,ED.2 +Canada/BC-BCCDC-566034/2022,ED.2 +Canada/BC-BCCDC-566363/2022,ED.2 +Canada/BC-BCCDC-581770/2023,ED.2 +Canada/BC-BCCDC-577511/2022,ED.2 +Canada/BC-BCCDC-577692/2023,ED.2 +USA/CA-CDC-QDX44066740/2022,ED.2 +USA/CO-CDPHE-2103731824/2022,ED.2 +USA/CO-CDPHE-2103731846/2022,ED.2 +USA/SC-CDC-LC0997997/2023,ED.2 +USA/NC-CDC-LC0986060/2023,ED.2 +USA/NC-CDC-LC0979517/2023,ED.2 +USA/CA-CDC-LC0970232/2022,ED.2 +USA/CA-HLX-STM-Q3J6GSEYX/2022,ED.2 +USA/CA-HLX-STM-6QB3GA2NC/2022,ED.2 +USA/CA-CDC-STM-GPRHQBK3T/2022,ED.2 +USA/HI-H2218184/2022,ED.2 +USA/CA-CDC-LC0948859/2022,ED.2 +USA/CO-CDPHE-2103726145/2022,ED.2 +USA/CA-CDPH-FS25392572/2022,ED.2 +USA/CA-CDC-LC0956398/2022,ED.2 +USA/CA-HLX-STM-83GHXR6DJ/2022,ED.2 +USA/IL-CDC-STM-JJ6M7HQPW/2022,ED.2 +USA/CA-CDPH-FS48078444/2023,ED.2 +USA/CA-CDPH-FS47041749/2023,ED.2 +USA/TX-CDC-LC0984162/2023,ED.2 +USA/MI-CDC-QDX44485963/2022,ED.2 +USA/CA-HLX-STM-M3C3XFT6B/2022,ED.2 +USA/CA-CDC-STM-P8GTV4RVA/2022,ED.2 +Canada/BC-BCCDC-566949/2022,ED.2 +Canada/BC-BCCDC-566684/2022,ED.2 +Canada/BC-BCCDC-566756/2022,ED.2 +Canada/BC-BCCDC-577292/2022,ED.2 +Canada/BC-BCCDC-581788/2022,ED.2 +Canada/BC-BCCDC-577255/2022,ED.2 +Canada/BC-BCCDC-577305/2022,ED.2 +Canada/BC-BCCDC-581064/2022,ED.2 +Canada/BC-BCCDC-581069/2022,ED.2 +Canada/BC-BCCDC-581896/2022,ED.2 +Canada/BC-BCCDC-566950/2022,ED.2 +Canada/BC-BCCDC-577301/2022,ED.2 +Canada/BC-BCCDC-581068/2022,ED.2 +Canada/BC-BCCDC-577303/2022,ED.2 +Canada/BC-BCCDC-577297/2022,ED.2 +Canada/BC-BCCDC-581070/2022,ED.2 +Canada/AB-ABPHL-83811/2022,ED.2 +Canada/AB-ABPHL-85657/2022,ED.2 +Canada/AB-ABPHL-83410/2022,ED.2 +Canada/AB-ABPHL-87428/2022,ED.2 +Canada/AB-ABPHL-87205/2022,ED.2 +Canada/AB-ABPHL-87182/2022,ED.2 +Canada/AB-ABPHL-84093/2022,ED.2 +Canada/AB-ABPHL-89068/2022,ED.2 +USA/CA-HLX-STM-N2ZJU2CPB/2022,ED.2 +USA/AZ-CDC-QDX44165592/2022,ED.2 +Canada/AB-ABPHL-91157/2023,ED.2 +Canada/SK-RRPL-578157/2022,ED.2 +Canada/AB-ABPHL-88505/2022,ED.2 +Canada/AB-ABPHL-89207/2022,ED.2 +Canada/AB-ABPHL-89210/2022,ED.2 +Canada/AB-ABPHL-89206/2022,ED.2 +Canada/BC-BCCDC-566947/2022,ED.2 +Canada/BC-BCCDC-585938/2023,ED.2 +Canada/BC-BCCDC-585551/2023,ED.2 +Canada/BC-BCCDC-581533/2023,ED.2 +Canada/BC-BCCDC-581314/2023,ED.2 +Canada/BC-BCCDC-581338/2023,ED.2 +Canada/BC-BCCDC-581419/2023,ED.2 +Canada/BC-BCCDC-581534/2023,ED.2 +Canada/BC-BCCDC-581539/2023,ED.2 +Canada/BC-BCCDC-581280/2023,ED.2 +Canada/BC-BCCDC-581484/2023,ED.2 +Canada/BC-BCCDC-582010/2023,ED.2 +Canada/BC-BCCDC-585937/2023,ED.2 +Canada/BC-BCCDC-585758/2023,ED.2 +Canada/BC-BCCDC-585760/2023,ED.2 +Canada/BC-BCCDC-585759/2023,ED.2 +Canada/BC-BCCDC-581535/2023,ED.2 +Canada/BC-BCCDC-585553/2023,ED.2 +Canada/BC-BCCDC-581870/2023,ED.2 +USA/MA-CDCBI-CRSP_DTUQYYVDKWZ27FH2/2022,ED.2 +USA/NH-CDC-LC0967326/2022,ED.2 +USA/VT-23-000161-WGS-02/2022,ED.2 +USA/VT-23-000153-WGS-02/2023,ED.2 +Germany/NW-RKI-I-1101943/2023,ED.2 +Germany/SH-RKI-I-1102184/2023,ED.2 +Germany/NW-RKI-I-1101933/2023,ED.2 +Germany/NW-RKI-I-1101926/2023,ED.2 +USA/MA-CDCBI-CRSP_AVX2OQPGVLTAFIZS/2022,ED.2 +SouthKorea/KDCA180611/2022,ED.2 +USA/MA-CDCBI-CRSP_IXSRJMKXEAQW6TP3/2022,ED.2 +USA/MA-CDCBI-CRSP_VIKVZQ5QMJTS7MGP/2022,ED.2 +USA/RI-CDC-LC0978466/2022,ED.2 +USA/MA-CDCBI-CRSP_ZOECL226NNMNWAQY/2022,ED.2 +USA/VT-23-001017-WGS-02/2023,ED.2 +Canada/ON-PHL-23-02676/2023,ED.2 +USA/CA-UW-22122820085/2022,ED.2 +USA/CO-CDPHE-2103738790/2022,ED.2 +USA/CO-CDC-QDX44621877/2022,ED.2 +USA/AR-CDC-QDX44739202/2022,ED.2 +USA/NC-CDC-LC0980937/2023,ED.2 +USA/CO-CDC-LC0934144/2022,ED.2 +USA/CO-CDPHE-2103738933/2022,ED.2 +USA/CO-CDPHE-2103731172/2022,ED.2 +USA/WA-CDC-UW22121197169/2022,ED.2 +USA/WA-CDC-UW97169/2022,ED.2 +USA/CO-CDPHE-2103724934/2022,ED.2 +USA/CO-CDPHE-2103730069/2022,ED.2 +USA/CO-CDPHE-2103726116/2022,ED.2 +USA/CO-CDPHE-2103728373/2022,ED.2 +USA/WA-CDC-UW22120516260/2022,ED.2 +USA/CO-CDPHE-2103722585/2022,ED.2 +USA/CO-CDPHE-2103718231/2022,ED.2 +USA/MD-IGS-052233000210A/2022,ED.2 +USA/CO-CDPHE-2103749785/2022,ED.2 +USA/CO-CDPHE-2103745317/2022,ED.2 +USA/WI-CDC-LC0995584/2023,ED.2 +USA/MS-UMMC-M1040D6-538491/2022,ED.2 +USA/WA-PHL-031616/2022,ED.2 +Canada/BC-BCCDC-553312/2022,ED.2 +Canada/SK-RRPL-562210/2022,ED.2 +Canada/SK-RRPL-565016/2022,ED.2 +USA/CA-CDC-STM-4769F2C9Q/2022,ED.2 +Canada/NL-PHML-556674/2022,ED.2 +USA/NY-URMC-2212B663-1/2022,ED.2 +Canada/ON-PHL-22-61276/2022,ED.2 +Canada/ON-PHL-22-60078/2022,ED.2 +Canada/ON-PHL-23-07585/2023,ED.2 +Canada/ON-PHL-23-01524/2022,ED.2 +Canada/ON-PHL-23-08475/2023,ED.2 +Canada/ON-PHL-23-03016/2023,ED.2 +Canada/ON-PHL-23-09741/2023,ED.2 +Canada/ON-PHL-23-05283/2023,ED.2 +Canada/ON-PHL-23-05281/2023,ED.2 +Canada/ON-PHL-23-05282/2023,ED.2 +Canada/ON-PHL-23-05284/2023,ED.2 +Canada/ON-PHL-23-06157/2023,ED.2 +Canada/ON-PHL-23-06155/2023,ED.2 +Canada/ON-PHL-23-05311/2023,ED.2 +Canada/ON-PHL-23-05493/2023,ED.2 +England/BRBR-3268848D/2023,ED.2 +England/QEUH-326A6E30/2023,ED.2 +Denmark/DCGC-616393/2022,ED.2 +Latvia/2212049099/2022,ED.2 +England/QEUH-32691700/2022,ED.2 +England/QEUH-32667017/2022,ED.2 +England/LOND-YYBK6K3/2022,ED.2 +England/PHEP-YYGR97A/2022,ED.2 +OX395663.1,ED.2 +Austria/LB-R00117-S138/2022,ED.2 +USA/CA-CDC-STM-ENAC2KKHU/2022,ED.2 +Wales/QEUH-326174A1/2022,ED.2 +England/QEUH-3261BE36/2022,ED.2 +England/PHEC-YY8T54G/2022,ED.2 +Denmark/DCGC-623494/2022,ED.2 +England/PHEP-YYGNX1N/2022,ED.2 +England/QEUH-3261039C/2022,ED.2 +England/PHEP-YYGBDZG/2022,ED.2 +Wales/PHWC-PKER9J/2022,ED.2 +England/PHEP-YYGE7GB/2023,ED.2 +England/PHEP-YYGE7YP/2023,ED.2 +England/PHEC-YYEBIGI/2023,ED.2 +England/PHEP-YYGEHPW/2023,ED.2 +Wales/QEUH-326A356B/2023,ED.2 +England/LSPA-3262D3D8/2022,ED.2 +England/LSPA-32635944/2022,ED.2 +England/LSPA-326345D8/2022,ED.2 +England/LSPA-32634CB5/2022,ED.2 +England/LSPA-32665170/2022,ED.2 +England/LSPA-3263475A/2022,ED.2 +Denmark/DCGC-626195/2022,ED.2 +Denmark/DCGC-628493/2022,ED.2 +Denmark/DCGC-628397/2022,ED.2 +Denmark/DCGC-635387/2023,ED.2 +Denmark/DCGC-625445/2022,ED.2 +Denmark/DCGC-640092/2023,ED.2 +Denmark/DCGC-630462/2022,ED.2 +Denmark/DCGC-623732/2022,ED.2 +Denmark/DCGC-621819/2022,ED.2 +Denmark/DCGC-632151/2022,ED.2 +Denmark/DCGC-634995/2023,ED.2 +Denmark/DCGC-629494/2022,ED.2 +Canada/SK-RRPL-565499/2022,ED.2 +USA/CA-HLX-STM-3N7FSEJRR/2022,ED.2 +USA/CA-HLX-STM-YNZSBMSD5/2022,ED.2 +Canada/AB-ABPHL-86482/2022,ED.2 +Canada/AB-ABPHL-86593/2022,ED.2 +Canada/AB-ABPHL-85662/2022,ED.2 +USA/OH-PLMI-H3JTF-15106/2022,ED.2 +USA/MO-CDC-LC0949174/2022,ED.2 +USA/MO-CDC-QDX44815384/2022,ED.2 +USA/MO-MSPHL-008881/2022,ED.2 +USA/IL-CDC-QDX44429480/2022,ED.2 +USA/IL-CDC-QDX44486036/2022,ED.2 +USA/MO-CDC-LC0985217/2022,ED.2 +USA/MO-CDC-QDX43583423/2022,ED.2 +USA/MO-CDC-QDX45434088/2023,ED.2 +USA/IL-CDC-QDX45031544/2022,ED.2 +USA/MI-UM-10048887133/2022,ED.2 +USA/MI-CDC-QDX44741028/2022,ED.2 +USA/MO-CDC-LC0965761/2022,ED.2 +USA/MI-CDC-STM-QX5UVUU6K/2022,ED.2 +USA/KS-CDC-QDX43990740/2022,ED.2 +USA/TX-CDC-QDX45690472/2023,ED.2 +USA/CA-CDC-LC0975135/2022,ED.2 +USA/MD-CDC-QDX44021304/2022,ED.2 +USA/WA-CDC-UW49225/2022,ED.2 +USA/VA-CDC-QDX44483713/2022,ED.2 +USA/WA-CDC-UW22121349225/2022,ED.2 +USA/NJ-CDC-QDX45031178/2022,ED.2 +USA/NJ-PHEL-V23000040/2022,ED.2 +USA/DE-CDC-LC0952308/2022,ED.2 +USA/NM-UNM-ED_04189/2022,ED.2 +Canada/BC-BCCDC-566367/2022,ED.2 +Canada/BC-BCCDC-581591/2022,ED.2 +USA/WA-UW-22110970711/2022,ED.2 +USA/CA-SC-276865/2023,ED.2 +Canada/BC-BCCDC-589423/2023,ED.2 +Canada/BC-BCCDC-589448/2023,ED.2 +Canada/BC-BCCDC-577528/2022,ED.2 +Canada/BC-BCCDC-577774/2023,ED.2 +Canada/BC-BCCDC-581975/2023,ED.2 +Canada/ON-PHL-23-00724/2023,ED.2 +Canada/BC-BCCDC-566872/2022,ED.2 +Canada/ON-PHL-22-56570/2022,ED.2 +USA/WA-UW-22112263463/2022,ED.2 +USA/WA-CDC-UW22111067538/2022,ED.2 +USA/IL-CDC-LC0949301/2022,ED.2 +USA/WA-UW-22123043754/2022,ED.2 +USA/WA-UW-22123022164/2022,ED.2 +Canada/BC-BCCDC-566180/2022,ED.2 +Canada/BC-BCCDC-566167/2022,ED.2 +Canada/BC-BCCDC-566320/2022,ED.2 +Canada/BC-BCCDC-566895/2022,ED.2 +Canada/BC-BCCDC-565704/2022,ED.2 +Canada/BC-BCCDC-565818/2022,ED.2 +Canada/BC-BCCDC-566621/2022,ED.2 +Canada/BC-BCCDC-577459/2022,ED.2 +Canada/BC-BCCDC-577457/2022,ED.2 +Canada/BC-BCCDC-566640/2022,ED.2 +Canada/BC-BCCDC-585603/2023,ED.2 +Canada/QC-L00579591001/2023,ED.2 +Canada/NB-CHUDGLD-170123-MM00178R/2023,ED.2 +Canada/NB-CHUDGLD-170123-MM00179R/2023,ED.2 +Canada/NB-CHUDGLD-200123-MM00068R/2023,ED.2 +Canada/NB-CHUDGLD-190123-MM00136R/2023,ED.2 +Netherlands/OV-RIVM-117394/2022,ED.2 +Canada/QC-L00552114001/2022,ED.2 +Belgium/ULG-28972/2022,ED.2 +USA/VT-23-000641-WGS-02/2023,ED.2 +Canada/QC-L00568726001/2022,ED.2 +Netherlands/NH-AUMC-034250/2022,ED.2 +Netherlands/OV-RIVM-118193/2022,ED.2 +Sweden/01_SE100_22CS509668/2022,ED.2 +Belgium/Jessa_11-2243-004593ZOL/2022,ED.2 +Belgium/ULG-28977/2022,ED.2 +USA/UT-UPHL-221115595204/2022,ED.2 +England/QEUH-32672310/2022,ED.2 +England/BRBR-3267D870/2022,ED.2 +England/QEUH-32656DBA/2022,ED.2 +Germany/BY-RKI-I-1091066/2023,ED.2 +USA/CA-CDC-LC0947931/2022,ED.2 +USA/UT-UPHL-221223157722/2022,ED.2 +USA/GA-CDC-QDX44737584/2022,ED.2 +USA/UT-UPHL-221219926436/2022,ED.2 +USA/CA-CDC-LC0970594/2022,ED.2 +USA/NY-CDC-LC0967325/2022,ED.2 +USA/SC-CDC-LC0980528/2023,ED.2 +USA/WA-PHL-031809/2022,ED.2 +USA/WA-CDC-UW23011747521/2023,ED.2 +USA/NJ-CDC-LC0997250/2023,ED.2 +USA/RI-RISHL-004265/2023,ED.2 +USA/UT-UPHL-221219530251/2022,ED.2 +USA/WA-S22388/2022,ED.2 +USA/UT-UPHL-221206826153/2022,ED.2 +USA/NY-URMC-2211B285-1/2022,ED.2 +USA/CA-CDC-LC0939631/2022,ED.2 +USA/CA-SC-274834/2022,ED.2 +USA/WI-CDC-LC0947446/2022,ED.2 +USA/CA-CDPH-FS27887669/2022,ED.2 +USA/UT-CDC-LC0956659/2022,ED.2 +USA/GA-ASC-210783292/2022,ED.2 +USA/AZ-CDC-STM-5YHMAXQU6/2022,ED.2 +USA/UT-UPHL-221130296733/2022,ED.2 +USA/CA-CDC-QDX45343112/2023,ED.2 +USA/AZ-ASPHL-0023/2023,ED.2 +USA/AZ-2023-0024/2023,ED.2 +USA/UT-UPHL-22122399963/2022,ED.2 +USA/UT-UPHL-221219545362/2022,ED.2 +USA/CA-CDC-STM-B7QHR66ZV/2022,ED.2 +USA/CA-CDC-STM-WF6VWK559/2022,ED.2 +USA/CA-SLOPH-C1832/2022,ED.2 +USA/CA-CDC-QDX43070837/2022,ED.2 +USA/CA-HLX-STM-TU5CRCJ2J/2022,ED.2 +USA/NY-URMC-2211B237-1/2022,ED.2 +USA/FL-CDC-QDX43916499/2022,ED.2 +USA/NY-URMC-2211B261-1/2022,ED.2 +USA/NY-URMC-2211B308-1/2022,ED.2 +USA/NY-URMC-2212B751-1/2022,ED.2 +USA/NY-URMC-2212C024-1/2022,ED.2 +USA/NY-URMC-C185-1/2022,ED.2 +USA/NY-URMC-2212C352-1/2022,ED.2 +USA/NY-URMC-2301C510-1/2023,ED.2 +USA/NY-URMC-2301C554-1/2023,ED.2 +USA/NY-URMC-M8S1D181-1/2022,ED.2 +USA/NY-URMC-M8S1D160-1/2022,ED.2 +USA/NY-URMC-2212C022-1/2022,ED.2 +USA/NY-URMC-M9S1D114-1/2023,ED.2 +Canada/ON-PHL-23-07017/2023,ED.2 +USA/NY-URMC-2301C613-1/2023,ED.2 +USA/NY-URMC-2212C007-1/2022,ED.2 +USA/NY-URMC-2212C364-1/2022,ED.2 +USA/NY-URMC-2301C608-1/2023,ED.2 +USA/NY-URMC-M9S1C672-1/2023,ED.2 +USA/NY-URMC-M9S1C718-1/2023,ED.2 +USA/NY-ASC-210963462/2023,ED.2 +USA/NY-URMC-M9S1C674-1/2023,ED.2 +USA/NY-URMC-2301C528-1/2023,ED.2 +USA/NY-URMC-M9S1C971-1/2023,ED.2 +USA/NY-URMC-M9S1D123-1/2023,ED.2 +USA/NY-URMC-2301C612-1/2023,ED.2 +USA/NY-URMC-2301C454-1/2023,ED.2 +USA/RI-CDC-LC0945631/2022,ED.2 +Canada/AB-ABPHL-87535/2022,ED.2 +USA/IL-C22WGS8836/2022,ED.2 +USA/TX-HMH-MCoV-122267/2023,ED.2 +USA/NY-CDC-QDX44539577/2022,ED.2 +USA/NJ-CDC-QDX44375481/2022,ED.2 +Canada/AB-ABPHL-90758/2023,ED.2 +Canada/AB-ABPHL-85190/2022,ED.2 +USA/VA-VTVAS3-GSC41468/2022,ED.2 +USA/CA-HLX-STM-XUQVDGF2G/2022,ED.2 +Canada/AB-ABPHL-84868/2022,ED.2 +Canada/AB-ABPHL-84216/2022,ED.2 +USA/IL-CDC-STM-6CD6SCKQH/2022,ED.2 +Canada/AB-ABPHL-85643/2022,ED.2 +USA/OH-PLMI-HF2NF-16650/2023,ED.2 +USA/KY-CDC-QDX44067970/2022,ED.2 +Canada/AB-ABPHL-87550/2022,ED.2 +Canada/AB-ABPHL-87555/2022,ED.2 +Canada/AB-ABPHL-88489/2022,ED.2 +USA/TN-SPHL-4243/2022,ED.2 +Canada/AB-ABPHL-85828/2022,ED.2 +USA/OKPHL0024518/2022,ED.2 +USA/OH-CDC-QDX45031612/2022,ED.2 +Canada/AB-ABPHL-88836/2022,ED.2 +Canada/AB-ABPHL-88865/2022,ED.2 +USA/TX-HMH-MCoV-123868/2023,ED.2 +USA/TX-HMH-MCoV-122085/2022,ED.2 +USA/NC-CDC-LC0967034/2022,ED.2 +USA/NC-CDC-LC0997991/2023,ED.2 +USA/NC-CDC-LC0993853/2023,ED.2 +USA/FL-CDC-QDX43797271/2022,ED.2 +USA/FL-CDC-QDX43797142/2022,ED.2 +USA/TX-CDC-QDX44991685/2022,ED.2 +Canada/AB-ABPHL-90462/2023,ED.2 +Canada/AB-ABPHL-89951/2022,ED.2 +Canada/AB-ABPHL-92031/2023,ED.2 +Canada/AB-ABPHL-91584/2023,ED.2 +Canada/AB-ABPHL-88464/2022,ED.2 +Canada/AB-ABPHL-89246/2022,ED.2 +Canada/AB-ABPHL-89065/2022,ED.2 +Canada/AB-ABPHL-92200/2023,ED.2 +Canada/AB-ABPHL-92218/2023,ED.2 +USA/NC-1086-4415/2023,ED.2 +Canada/AB-ABPHL-89079/2022,ED.2 +Canada/AB-ABPHL-89915/2022,ED.2 +Canada/AB-ABPHL-88827/2022,ED.2 +Canada/AB-ABPHL-87570/2022,ED.2 +USA/CA-CDPH-FS47307558/2023,ED.2 +USA/CA-CDC-QDX44587543/2022,ED.2 +USA/CA-CDC-LC0960059/2022,ED.2 +USA/CA-CDC-STM-56AZF2R8H/2022,ED.2 +USA/CA-UCSF-JD2861/2022,ED.2 +USA/CA-UCSF-JD2880/2022,ED.2 +USA/CA-UCSF-JD2888/2022,ED.2 +USA/CA-SCPHL-23WGS00173/2023,ED.2 +USA/CA-HLX-STM-GTDUYWVHF/2022,ED.2 +USA/CA-SCPHL-23WGS00116/2023,ED.2 +USA/GA-CDC-STM-XUHHVCUC8/2022,ED.2 +USA/DC-DFS-PHL-08958/2022,ED.2 +USA/TN-SPHL-4241/2022,ED.2 +USA/KY-CDC-LC0953334/2022,ED.2 +USA/ID-IBL-873171/2023,ED.2 +USA/TX-PHH-SPID1004422936/2022,ED.2 +USA/CA-CDPH-A3000000316846/2023,ED.2 +USA/VA-VTVAS3-GSC41229/2022,ED.2 +USA/SC-CDC-QDX45209080/2023,ED.2 +USA/TX-CDC-QDX44166024/2022,ED.2 +USA/OH-CDC-QDX44067783/2022,ED.2 +USA/WV-ASC-210962701/2023,ED.2 +USA/WV-CDC-LC0985176/2022,ED.2 +USA/WV-CDC-LC0982532/2022,ED.2 +USA/FL-CDC-QDX44485141/2022,ED.2 +USA/FL-CDC-QDX44996268/2022,ED.2 +USA/FL-CDC-QDX44996269/2022,ED.2 +USA/CA-CDPH-FS25391820/2022,ED.2 +USA/FL-ASC-210995632/2023,ED.2 +USA/CA-CDC-804051107/2023,ED.2 +USA/NC-CORVASEQ-1085-8764/2022,ED.2 +USA/WA-CDC-LC0989465/2023,ED.2 +USA/FL-CDC-QDX44996014/2022,ED.2 +USA/WA-PHL-031579/2022,ED.2 +USA/TX-ASC-210964893/2023,ED.2 +USA/NY-SUNYQB-X4310/2022,ED.2