diff --git a/lineage_notes.txt b/lineage_notes.txt index fd20d949..29cb8326 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -2580,6 +2580,7 @@ XAY.1 South Africa/US lineage with 4 AA substitutions including S:D253G XAY.1.1 South Africa with S:R346T and ORF1a:K2108N, from issue #1255 XAY.1.1.1 Europe, S:D1153Y, #1569 XAY.1.1.2 Germany/South Africa, C14838T +XAY.1.1.3 Germany/China/Luxembourg, C6040T, C8290T, T15153C XAY.1.2 Europe, ORF1a:T3646I XAY.2 South Africa/Denmark/Israel lineage with ORF1a:Y3765C XAY.2.1 Denmark, N:T24A diff --git a/lineages.csv b/lineages.csv index c0de0973..0cc00a42 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2147871,16 +2147871,6 @@ France/ARA-HCL723000184901/2023,XAY.1.1 France/ARA-HCL723000184801/2023,XAY.1.1 France/ARA-HCL722004429101/2022,XAY.1.1 France/ARA-HCL722004427801/2022,XAY.1.1 -Germany/BW-RKI-I-1091505/2023,XAY.1.1 -Germany/SN-RKI-I-1088995/2023,XAY.1.1 -Germany/SN-RKI-I-1084448/2022,XAY.1.1 -Germany/SL-RKI-I-1098569/2023,XAY.1.1 -Germany/RP-RKI-I-1087174/2023,XAY.1.1 -Germany/SN-RKI-I-1081711/2022,XAY.1.1 -Belgium/UGent-7844/2022,XAY.1.1 -Germany/NW-RKI-I-1095774/2023,XAY.1.1 -Germany/BW-RKI-I-1102705/2023,XAY.1.1 -Germany/HE-RKI-I-1101338/2023,XAY.1.1 Spain/VC-CVA_ALIC-116733/2023,XAY.1.1.1 Spain/VC-CVA_ALIC-116295/2022,XAY.1.1.1 Spain/VC-CVA_ALIC-116294/2022,XAY.1.1.1 @@ -2370597,3 +2370587,58 @@ Germany/BE-RKI-I-1115262/2023,XAY.1.1.2 Germany/SN-RKI-I-1106986/2023,XAY.1.1.2 Germany/SN-RKI-I-1128072/2023,XAY.1.1.2 Germany/SN-RKI-I-1117433/2023,XAY.1.1.2 +Germany/SN-RKI-I-1084448/2022,XAY.1.1.3 +Germany/SN-RKI-I-1088995/2023,XAY.1.1.3 +Germany/BW-RKI-I-1091505/2023,XAY.1.1.3 +Germany/SN-RKI-I-1107964/2023,XAY.1.1.3 +Germany/RP-RKI-I-1112066/2023,XAY.1.1.3 +Germany/RP-RKI-I-1113988/2023,XAY.1.1.3 +Germany/BW-RKI-I-1106094/2023,XAY.1.1.3 +Germany/BW-RKI-I-1120472/2023,XAY.1.1.3 +Germany/BW-RKI-I-1122650/2023,XAY.1.1.3 +Germany/BW-RKI-I-1130888/2023,XAY.1.1.3 +Germany/BW-RKI-I-1115591/2023,XAY.1.1.3 +Germany/SN-RKI-I-1112876/2023,XAY.1.1.3 +Germany/RP-RKI-I-1131821/2023,XAY.1.1.3 +Germany/RP-RKI-I-1109735/2023,XAY.1.1.3 +Germany/SN-RKI-I-1081711/2022,XAY.1.1.3 +Belgium/UGent-7844/2022,XAY.1.1.3 +Germany/RP-RKI-I-1111858/2023,XAY.1.1.3 +Germany/BW-RKI-I-1106112/2023,XAY.1.1.3 +Germany/BW-RKI-I-1113342/2023,XAY.1.1.3 +Germany/BW-RKI-I-1109160/2023,XAY.1.1.3 +Germany/NW-RKI-I-1121986/2023,XAY.1.1.3 +Germany/NW-RKI-I-1095774/2023,XAY.1.1.3 +Germany/RP-RKI-I-1124763/2023,XAY.1.1.3 +Germany/NW-RKI-I-1119412/2023,XAY.1.1.3 +Germany/NW-RKI-I-1119426/2023,XAY.1.1.3 +Germany/NW-RKI-I-1122033/2023,XAY.1.1.3 +Germany/BW-RKI-I-1102705/2023,XAY.1.1.3 +Germany/NW-RKI-I-1118732/2023,XAY.1.1.3 +Germany/BW-RKI-I-1110637/2023,XAY.1.1.3 +Germany/HE-RKI-I-1101338/2023,XAY.1.1.3 +Germany/SL-RKI-I-1098569/2023,XAY.1.1.3 +SouthKorea/KDCA205230/2023,XAY.1.1.3 +Germany/SL-RKI-I-1105163/2023,XAY.1.1.3 +Germany/RP-RKI-I-1087174/2023,XAY.1.1.3 +Luxembourg/LNS1124052/2023,XAY.1.1.3 +Luxembourg/LNS3667565/2023,XAY.1.1.3 +Luxembourg/LNS3997117/2023,XAY.1.1.3 +Luxembourg/LNS4461011/2023,XAY.1.1.3 +Luxembourg/LNS5514417/2023,XAY.1.1.3 +Luxembourg/LNS1719160/2023,XAY.1.1.3 +Luxembourg/LNS8253229/2023,XAY.1.1.3 +CHN/SH-XG2304-2049/2023,XAY.1.1.3 +Shanghai/SCDC-SH-XG04-2049/2023,XAY.1.1.3 +Germany/HE-RKI-I-1112367/2023,XAY.1.1.3 +CHN/ZJCDC014/2023,XAY.1.1.3 +Germany/NW-RKI-I-1123085/2023,XAY.1.1.3 +Germany/SN-RKI-I-1112763/2023,XAY.1.1.3 +Germany/SN-RKI-I-1112976/2023,XAY.1.1.3 +Zhejiang/ZJCDC-798/2023,XAY.1.1.3 +CHN/ZJCDC798/2023,XAY.1.1.3 +Shanghai/SCDC-SH-PD04070007/2023,XAY.1.1.3 +CHN/SH-PD202304070007/2023,XAY.1.1.3 +Germany/SN-RKI-I-1119918/2023,XAY.1.1.3 +Germany/SH-RKI-I-1108453/2023,XAY.1.1.3 +Germany/BW-RKI-I-1109085/2023,XAY.1.1.3