From a8a99b517bf8eaf9d2240b3f3179f1f3f319668a Mon Sep 17 00:00:00 2001 From: Cornelius Roemer Date: Fri, 24 Mar 2023 19:12:58 +0100 Subject: [PATCH] Added lineage FG.1 (XBB.1.5.16.1 with S:T284I, S:R403K, S:L513F) from #1751 Resolves #1751 --- lineage_notes.txt | 1 + lineages.csv | 16 ++++++++++++++-- pango_designation/alias_key.json | 1 + 3 files changed, 16 insertions(+), 2 deletions(-) diff --git a/lineage_notes.txt b/lineage_notes.txt index 790aadef..bae9acaf 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -2592,6 +2592,7 @@ XBB.1.5.15 G15957T, USA FD.1 Alias of XBB.1.5.15.1, ORF7b:E3*, England/Canada FD.1.1 Alias of XBB.1.5.15.1.1, S:F456L, Canada-QC XBB.1.5.16 T14766C, USA +FG.1 Alias of XBB.1.5.16.1, S:T284I, S:R403K, S:L513F, USA, from #1751 XBB.1.5.17 C23635T, USA XBB.1.5.18 ORF1a:T2300I, England/Europe XBB.1.5.19 ORF1b:R172C, USA diff --git a/lineages.csv b/lineages.csv index f2f14bd2..5ad3fde3 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2227325,8 +2227325,6 @@ Ireland/D-NVRL-S23IRL00006380/2023,XBB.1.5.16 Ireland/D-NVRL-S23IRL00005377/2023,XBB.1.5.16 USA/NY-CDC-LC0980444/2023,XBB.1.5.16 USA/CT-Yale-23500/2022,XBB.1.5.16 -USA/IL-CDC-QDX45864152/2023,XBB.1.5.16 -USA/IL-CDC-STM-VMXNYV8WU/2023,XBB.1.5.16 USA/PA-CDC-LC1002573/2023,XBB.1.5.16 USA/PA-CDC-LC0995998/2023,XBB.1.5.16 USA/NY-CDC-QDX46447868/2023,XBB.1.5.16 @@ -2358627,3 +2358625,17 @@ Austria/AGES-1116248/2023,XBF.9 Austria/AGES-1118967/2023,XBF.9 Germany/BY-RKI-I-1122440/2023,XBF.9 Austria/AGES-1116250/2023,XBF.9 +USA/MA-CDC-LC1027512/2023,FG.1 +USA/IL-CDC-QDX45864152/2023,FG.1 +USA/OH-CDC-QDX46612450/2023,FG.1 +USA/OH-CDC-LC1022756/2023,FG.1 +USA/KY-CDC-QDX47145357/2023,FG.1 +USA/OH-CDC-QDX47272442/2023,FG.1 +USA/OH-CDC-QDX47418842/2023,FG.1 +USA/IL-CDC-STM-VMXNYV8WU/2023,FG.1 +USA/OH-CDC-QDX47272471/2023,FG.1 +USA/OH-CDC-QDX47145331/2023,FG.1 +USA/SC-CDC-QDX47492082/2023,FG.1 +USA/IL-CDC-QDX47272548/2023,FG.1 +USA/IL-CDC-QDX46612407/2023,FG.1 +USA/IL-RIPHL_21009_G/2023,FG.1 diff --git a/pango_designation/alias_key.json b/pango_designation/alias_key.json index 03537ef8..6b7fdc86 100644 --- a/pango_designation/alias_key.json +++ b/pango_designation/alias_key.json @@ -137,6 +137,7 @@ "FD": "XBB.1.5.15", "FE": "XBB.1.18.1", "FF": "B.1.1.529.5.3.1.1.1.1.1.8.2", + "FG": "XBB.1.5.16", "XA": ["B.1.1.7","B.1.177"], "XB": ["B.1.634","B.1.631"], "XC": ["AY.29","B.1.1.7"],