From a62b0929ed09c43dd643ed91ded475470f4c253c Mon Sep 17 00:00:00 2001 From: Cornelius Roemer Date: Sat, 28 Jan 2023 23:39:00 +0100 Subject: [PATCH] Added lineage DZ.1 (BA.5.2.49 with S:D1146Y) with 50 designations --- lineage_notes.txt | 1 + lineages.csv | 90 ++++++++++++++++++++++++++++---- pango_designation/alias_key.json | 1 + 3 files changed, 82 insertions(+), 10 deletions(-) diff --git a/lineage_notes.txt b/lineage_notes.txt index 8145600d..5673d9cc 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -1159,6 +1159,7 @@ DQ.1 Alias of B.1.1.529.5.2.47.1 found mainly in Indonesia, Germany, and USA, fr BA.5.2.48 Alias of B.1.1.529.5.2.48, China, C2710T, C8626T, T17208C, from pango-designation issue #1471 DY.1 Alias of B.1.1.529.5.2.48.1, China, S:A570S BA.5.2.49 Alias of B.1.1.529.5.2.49, China, S:T883I, A14673G, T16456C, from #1480 +DZ.1 Alias of B.1.1.529.5.2.49.1, China, S:D1146Y BA.5.2.50 Alias of B.1.1.529.5.2.50 found mainly in China, from pango-designation issue #1542 BA.5.3 Alias of B.1.1.529.5.3, mainly found in Germany and South Africa, from pango-designation issue #550 BA.5.3.1 Alias of B.1.1.529.5.3.1, mainly found in South Africa, Austria, and England, from pango-designation issue #625 diff --git a/lineages.csv b/lineages.csv index 9f1cb455..de881299 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2133954,16 +2133954,6 @@ Shanghai/SJTU-235031/2022,BA.5.2.49 Fujian/FPCDCP-2778/2022,BA.5.2.49 Shanghai/SJTU-235615/2022,BA.5.2.49 Shanghai/SJTU-234614/2022,BA.5.2.49 -Fujian/FPCDCP-2728/2022,BA.5.2.49 -USA/CA-GBW-H20-285-0588/2022,BA.5.2.49 -Singapore/16583/2022,BA.5.2.49 -Hunan/CSCDC-16/2022,BA.5.2.49 -Hunan/HuNCDC-1912/2022,BA.5.2.49 -Hunan/HuNCDC-1915/2022,BA.5.2.49 -Fujian/FPCDCP-2823/2022,BA.5.2.49 -Fujian/FPCDCP-06-3/2022,BA.5.2.49 -Fujian/FPCDCP-06-2/2022,BA.5.2.49 -Fujian/FPCDCP-06-1/2022,BA.5.2.49 Sichuan/SCDCP-4339/2022,BA.5.2.49 Australia/NSW-ICPMR-40026/2022,BA.5.2.49 Singapore/16677/2022,BA.5.2.49 @@ -2141672,4 +2141662,84 @@ Singapore/16051/2022,BF.7.14.3 Zhejiang/IVDC-956/2022,BF.7.14.3 InnerMongolia/IVDC-1265/2022,BF.7.14.3 Zhejiang/IVDC-757/2022,BF.7.14.3 +Shandong/SDCDC-3039/2022,DZ.1 +Shandong/SDCDC-3038/2022,DZ.1 +Shandong/SDCDC-0163/2022,DZ.1 +Shandong/SDCDC-0154/2022,DZ.1 +Shandong/SDCDC-0155/2022,DZ.1 +Shandong/SDCDC-0149/2022,DZ.1 +Shandong/SDCDC-0141/2023,DZ.1 +Shandong/SDCDC-0269/2023,DZ.1 +Shandong/SDCDC-0414/2023,DZ.1 +Hunan/CCDC-41/2022,DZ.1 +Shandong/SDCDC-3026/2022,DZ.1 +Shandong/SDCDC-0468/2023,DZ.1 +Hunan/CCDC-51/2023,DZ.1 +Hunan/CCDC-38/2022,DZ.1 +Fujian/FCDC-00142/2023,DZ.1 +Shandong/SDCDC-0074/2022,DZ.1 +Singapore/R4MR81/2023,DZ.1 +Hunan/CSCDC-16/2022,DZ.1 +Hunan/HuNCDC-1912/2022,DZ.1 +Hunan/HuNCDC-1915/2022,DZ.1 +Fujian/FPCDCP-2823/2022,DZ.1 +USA/CA-GBW-H20-285-0588/2022,DZ.1 +Hunan/CCDC-48/2023,DZ.1 +Shandong/SDCDC-2319/2022,DZ.1 +Shandong/SDCDC-2328/2022,DZ.1 +Shandong/SDCDC-3027/2022,DZ.1 +Shandong/SDCDC-3032/2022,DZ.1 +SouthKorea/KDCA189431/2022,DZ.1 +Japan/IC-15666/2023,DZ.1 +Shandong/SDCDC-0510/2023,DZ.1 +Shandong/SDCDC-0153/2022,DZ.1 +Shandong/SDCDC-0393/2023,DZ.1 +Shandong/SDCDC-0243/2022,DZ.1 +Shandong/SDCDC-0290/2022,DZ.1 +Shandong/SDCDC-0403/2023,DZ.1 +Shandong/SDCDC-2324/2022,DZ.1 +Shandong/SDCDC-2325/2022,DZ.1 +Shandong/SDCDC-2331/2022,DZ.1 +Shandong/SDCDC-2330/2022,DZ.1 +Fujian/FPCDCP-2728/2022,DZ.1 +Jilin/JLCDC-57491/2022,DZ.1 +Hunan/CCDC-27/2023,DZ.1 +Shandong/SDCDC-0161/2022,DZ.1 +Shandong/SDCDC-1815/2022,DZ.1 +Shandong/SDCDC-0260/2023,DZ.1 +Shandong/SDCDC-0257/2023,DZ.1 +Shanghai/IVDC-1507/2022,DZ.1 +Tianjin/TJCDC-007/2022,DZ.1 +Shanghai/IVDC-1599/2022,DZ.1 +Shanghai/IVDC-1789/2022,DZ.1 +Shanghai/IVDC-1788/2022,DZ.1 +SouthKorea/KDCA-196555/2023,DZ.1 +SouthKorea/KDCA190660/2022,DZ.1 +Japan/IC-15387/2023,DZ.1 +Japan/IC-15386/2023,DZ.1 +Shandong/SDCDC-2316/2022,DZ.1 +Japan/IC-15332/2022,DZ.1 +Shandong/SDCDC-0401/2022,DZ.1 +Shandong/SDCDC-2307/2022,DZ.1 +Fujian/FPCDCP-06-3/2022,DZ.1 +Fujian/FPCDCP-06-2/2022,DZ.1 +Fujian/FPCDCP-06-1/2022,DZ.1 +Zhejiang/IVDC-50/2023,DZ.1 +Shanghai/IVDC-1699/2022,DZ.1 +Shanghai/IVDC-1801/2022,DZ.1 +Shanghai/IVDC-1663/2022,DZ.1 +Shanghai/IVDC-1517/2022,DZ.1 +Anhui/MCDC-122916/2022,DZ.1 +Shandong/SDCDC-0466/2023,DZ.1 +Shandong/SDCDC-0177/2022,DZ.1 +Shandong/SDCDC-0366/2022,DZ.1 +Shanghai/IVDC-1762/2022,DZ.1 +Japan/IC-15499/2023,DZ.1 +Zhejiang/IVDC-118/2023,DZ.1 +Shandong/SDCDC-0465/2023,DZ.1 +Australia/VIC80077/2023,DZ.1 +Singapore/16583/2022,DZ.1 +Shandong/SDCDC-0157/2022,DZ.1 +Shandong/SDCDC-0314/2023,DZ.1 +Shandong/SDCDC-0317/2023,DZ.1 diff --git a/pango_designation/alias_key.json b/pango_designation/alias_key.json index 2dcdb23a..1ce69313 100644 --- a/pango_designation/alias_key.json +++ b/pango_designation/alias_key.json @@ -107,6 +107,7 @@ "DV": "B.1.1.529.2.75.3.4.1.1.1.1.1", "DW": "B.1.1.529.5.3.1.1.2.1", "DY": "B.1.1.529.5.2.48", + "DZ": "B.1.1.529.5.2.49", "XA": ["B.1.1.7","B.1.177"], "XB": ["B.1.634","B.1.631"], "XC": ["AY.29","B.1.1.7"],