diff --git a/lineage_notes.txt b/lineage_notes.txt index 376a5989..a664c1d9 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -2764,6 +2764,7 @@ XBB.1.5.43 C18501T, Singapore/Malaysia/Indonesia XBB.1.5.44 S:K356T, S:T572I, USA, from #1907 HC.1 Alias of XBB.1.5.44.1, S:P631S, USA, from sars-cov-2-variants/lineage-proposals#106 HC.2 Alias of XBB.1.5.44.2, S:F157L, Canada, from #2202 +HC.3 Alias of XBB.1.5.44.3, S:P793S, USA XBB.1.5.45 S:478R, C27425T, G28079T, India-GJ/MH, from #1792 XBB.1.5.46 C5770T, C15279T, Germany/France GB.1 Alias of XBB.1.5.46.1, S:L518V, France, from #1969 @@ -2973,6 +2974,7 @@ FL.33 Alias of XBB.1.9.1.33, ORF1b:A1377V FL.33.1 Alias of XBB.1.9.1.33.1, S:478R, Georgia FL.34 Alias of XBB.1.9.1.34, S:D1118Y FL.35 Alias of XBB.1.9.1.35, ORF8:S103L, South Africa +FL.36 Alias of XBB.1.9.1.36, S:76I, S:190S, S:356T, S:572I, S:899S, S:1070T, England/US/Denmark, sars-cov-2-variants/lineage-proposals#805 XBB.1.9.2 S:F486P (after 27507C, 16878T), Indonesia/Singaporeļ¼Œfrom #1602 EG.1 Alias of XBB.1.9.2.1, S:Q613H on N:L219F branch, from #1664 and https://github.com/jmcbroome/auto-pango-designation/pull/193 EG.1.1 Alias of XBB.1.9.2.1.1, S:V70F and ORF1a:T403I, Luxembourg/Belgium/France diff --git a/lineages.csv b/lineages.csv index de87180e..c27ee681 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2425865,7 +2425865,6 @@ USA/CA-HLX-STM-4DTYVJGNN/2023,XBB.1.5.44 USA/CA-LACPHL-AF22165/2023,XBB.1.5.44 USA/OSPHL08619/2023,XBB.1.5.44 USA/CA-Stanford-146_S16/2023,XBB.1.5.44 -USA/CA-CCPHL-4976/2023,XBB.1.5.44 USA/NV-CDC-LC1042581/2023,XBB.1.5.44 USA/CA-CDC-QDX49399579/2023,XBB.1.5.44 USA/CA-HLX-STM-ZNX9NV8ER/2023,XBB.1.5.44 @@ -2466925,3 +2466924,34 @@ SouthKorea/KDCA236457/2023,EP.1.1.1 Taiwan/CDC-F87934/2023,EP.1.1.1 Taiwan/CDC-F86283/2023,EP.1.1.1 Taiwan/CDC-W28137/2023,EP.1.1.1 +USA/CA-CDPH-500116948/2023,HC.3 +USA/CA-CCPHL-4976/2023,HC.3 +USA/IL-CDC-QDX82480702/2023,HC.3 +USA/VT-CDC-VSX-A356464/2023,HC.3 +USA/TX-HMH-M-130203/2023,HC.3 +USA/VA-DCLS-15321/2023,HC.3 +USA/VA-DCLS-15319/2023,HC.3 +USA/VA-DCLS-15320/2023,HC.3 +USA/IL-CDC-LC1057229/2023,HC.3 +USA/CA-CDC-VSX-A352207/2023,HC.3 +USA/AL-CDC-LC1048892/2023,HC.3 +USA/CA-HLX-STM-AR9GNBRNA/2023,HC.3 +USA/TX-HMH-M-132676/2023,HC.3 +USA/TX-HMH-M-132392/2023,HC.3 +USA/TX-HMH-M-132921/2023,HC.3 +USA/TX-HMH-M-132517/2023,HC.3 +USA/TX-HMH-M-132120/2023,HC.3 +USA/TX-HMH-M-133315/2023,HC.3 +USA/TX-HMH-M-133153/2023,HC.3 +USA/NJ-GBW-H10-016-7669/2023,FL.36 +USA/NJ-GBW-H20-328-9435/2023,FL.36 +England/CLIMB-CM7YFXH4/2023,FL.36 +USA/NY-SUNYQB-X6208/2023,FL.36 +Denmark/DCGC-659627/2023,FL.36 +Denmark/DCGC-659324/2023,FL.36 +England/CLIMB-CM7YEXD8/2023,FL.36 +England/CLIMB-CM7YR7YM/2023,FL.36 +England/CLIMB-CM7YG7OS/2023,FL.36 +England/CLIMB-CM7YEGPK/2023,FL.36 +England/CLIMB-CM7YKNXW/2023,FL.36 +England/CLIMB-CM7YMU8K/2023,FL.36