From 7b6a943cd637c831ca2e8a9d068beb7397ce7384 Mon Sep 17 00:00:00 2001 From: Cornelius Roemer Date: Tue, 22 Aug 2023 01:57:26 +0200 Subject: [PATCH] Designate GA.4.1 (XBB.1.17.1.4.1, S:K478R, S:S704L, S:E554K, USA/Qatar) with 5 seqs --- lineage_notes.txt | 1 + lineages.csv | 7 +++++-- 2 files changed, 6 insertions(+), 2 deletions(-) diff --git a/lineage_notes.txt b/lineage_notes.txt index b759a86c..1a1172de 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -3039,6 +3039,7 @@ GA.1 Alias of XBB.1.17.1.1, ORF1a:G728C GA.2 Alias of XBB.1.17.1.2, ORF3a:I179F, T6640C, Africa GA.3 Alias of XBB.1.17.1.3, ORF1b:A186V, Ghana GA.4 Alias of XBB.1.17.1.4, S:K356T, ORF1a:N1080D, ORF1a:S2553F, Nigeria from https://github.com/sars-cov-2-variants/lineage-proposals/issues/265 +GA.4.1 Alias of XBB.1.17.1.4.1, S:K478R, S:S704L, S:E554K, USA/Qatar GA.5 Alias of XBB.1.17.1.5, T23797C GA.6 Alias of XBB.1.17.1.6, ORF1a:I2138V, G8785A, Ghana GA.6.1 Alias of XBB.1.17.1.6.1, S:478R, A19767G, C29642T diff --git a/lineages.csv b/lineages.csv index 3cc62c5d..243339b7 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2444845,8 +2444845,6 @@ Nigeria/NCDC-NR-GL-0072/2023,GA.4 Nigeria/NCDC-NR-GL-0069/2023,GA.4 Belgium/UGent-1312/2023,GA.4 France/HDF-IPP14723/2023,GA.4 -USA/NY-GBW-H20-330-5990/2023,GA.4 -USA/NY-GBW-H10-015-6630/2023,GA.4 USA/CA-LACPHL-AF23050/2023,GA.4 USA/CA-LACPHL-AF23117/2023,GA.4 Italy/VEN-AOUIVR-7310406601_VR/2023,GA.4 @@ -2455122,3 +2455120,8 @@ USA/PA-CDC-QDX83233063/2023,XBB.1.41.2 USA/FL-CDC-QDX83301113/2023,XBB.1.41.2 USA/NY-CDC-QDX83075021/2023,XBB.1.41.2 USA/CA-CDC-VSX-A349630/2023,XBB.1.41.2 +USA/MI-UM-L368024525/2023,GA.4.1 +USA/NY-NYULH-15889/2023,GA.4.1 +USA/NY-NYULH-15881/2023,GA.4.1 +USA/NY-GBW-H20-330-5990/2023,GA.4.1 +USA/NY-GBW-H10-015-6630/2023,GA.4.1