diff --git a/lineage_notes.txt b/lineage_notes.txt index 85ead728..b5df4e7f 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -2640,6 +2640,7 @@ XBB.1.7 USA-NY, S:V608I XBB.1.8 Denmark, S:186insSGG, C3241T XBB.1.9 ORF1a:G1819S, ORF1a:T4175I XBB.1.9.1 S:F486P (after C11956T), Indonesia/Singapore/Malaysia/England +FL.1 Alias of XBB.1.9.1.1, S:701V, ORF1a:G993S XBB.1.9.2 S:F486P (after 27507C, 16878T), Indonesia/Singapore EG.1 Alias of XBB.1.9.2.1, S:Q613H on N:L219F branch, from #1664 and https://github.com/jmcbroome/auto-pango-designation/pull/193 EG.2 Alias of XBB.1.9.2.2, S:478R, Indonesia diff --git a/lineages.csv b/lineages.csv index e76de1fa..587e5e38 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2362857,3 +2362857,135 @@ Canada/ON-PHL-23-08963/2023,XBB.1.32 Canada/ON-PHL-23-08981/2023,XBB.1.32 Canada/ON-PHL-23-05369/2023,XBB.1.32 Canada/ON-PHL-23-08983/2023,XBB.1.32 +BHR/890862427/2023,FL.1 +Israel/ICH-741196069/2023,FL.1 +Oman/5233928/2023,FL.1 +Austria/LB-R00127-S202/2023,FL.1 +Singapore/R18MR111/2023,FL.1 +Netherlands/GE-RIVM-127025/2023,FL.1 +Japan/PG-459082/2023,FL.1 +SouthKorea/KDCA219540/2023,FL.1 +Israel/ICH-741196518/2023,FL.1 +England/PHEC-YYEX1O8/2023,FL.1 +France/ARA-HCL-723000352801/2023,FL.1 +India/MH_BJCOG_5265/2023,FL.1 +England/BRBR-3270C927/2023,FL.1 +Japan/TMIPH-88189/2023,FL.1 +Indonesia/JK-GS-GSILab-1148067-0/2023,FL.1 +Malaysia/C19UMB3853/2023,FL.1 +England/PLYM-326B50B0/2023,FL.1 +Netherlands/GE-RIVM-125743/2023,FL.1 +France/ARA-HCL023046887401/2023,FL.1 +England/BRBR-327104E3/2023,FL.1 +England/BRBR-32710304/2023,FL.1 +Slovenia/17-001900-CE/2023,FL.1 +Slovenia/17-001561-CE/2023,FL.1 +India/MH-ICMR-NIV-G-13301/2023,FL.1 +Japan/PG-465507/2023,FL.1 +Malaysia/IMR_LF02750/2023,FL.1 +Malaysia/IMR_LF02647/2023,FL.1 +USA/NY-PRL-230327_82B06/2023,FL.1 +Israel/ICH-741197237/2023,FL.1 +Singapore/R20MR318/2023,FL.1 +England/PHEC-YYEXBNI/2023,FL.1 +England/PHEC-YYEMEY4/2023,FL.1 +Australia/NSW-ICPMR-43975/2023,FL.1 +India/GJ-GBRC10302/2023,FL.1 +Japan/PG-454020/2023,FL.1 +Australia/NSW-ICPMR-44007/2023,FL.1 +Australia/SA529007/2023,FL.1 +Germany/HH-RKI-I-1120178/2023,FL.1 +Malaysia/IMR_CV5407/2023,FL.1 +Indonesia/JK-NIHRD-W00727/2023,FL.1 +Oman/5235505/2023,FL.1 +Bahrain/CDL-R25902799995/2023,FL.1 +BHR/R25902799995_S13_L001/2023,FL.1 +BHR/221204539/2023,FL.1 +BHR/550701966/2023,FL.1 +England/PHEP-YYGXWCO/2023,FL.1 +England/BRBR-327060BF/2023,FL.1 +England/BRBR-3270677E/2023,FL.1 +England/BRBR-32706608/2023,FL.1 +England/BRBR-327060FB/2023,FL.1 +England/BRBR-3270984B/2023,FL.1 +England/PHEP-YYGP5WH/2023,FL.1 +Wales/PHWC-PKPXP3/2023,FL.1 +England/PHEP-YYGX75E/2023,FL.1 +England/PHEP-YYGXNTZ/2023,FL.1 +England/PLYM-3270C444/2023,FL.1 +England/BRBR-32712153/2023,FL.1 +England/BRBR-32711F4B/2023,FL.1 +England/BRBR-32712171/2023,FL.1 +Spain/CT-HUVH-E22526/2023,FL.1 +Spain/CT-HUVH-E22525/2023,FL.1 +Italy/FVG-ASUGI-65344468/2023,FL.1 +Spain/CT-HUVH-E61224/2023,FL.1 +Italy/LOM-IRCCS-01024190/2023,FL.1 +France/OCC-HCL-723000358701/2023,FL.1 +Canada/QC-L00595315001/2023,FL.1 +Denmark/DCGC-643127/2023,FL.1 +Spain/CT-HUVH-E22851/2023,FL.1 +Spain/CT-HUVH-E22527/2023,FL.1 +SouthKorea/KDCA223886/2023,FL.1 +Singapore/R21MR106/2023,FL.1 +SouthKorea/KDCA220703/2023,FL.1 +SouthKorea/KDCA220742/2023,FL.1 +Spain/CT-HUGTiP-A1R128/2023,FL.1 +Spain/CT-HUGTiP-D1R128/2023,FL.1 +England/PLYM-326B5074/2023,FL.1 +England/PLYM-326D1986/2023,FL.1 +England/PLYM-326D524B/2023,FL.1 +England/BRBR-326B056B/2023,FL.1 +England/PLYM-326C51E7/2023,FL.1 +England/PLYM-326C51F6/2023,FL.1 +England/PLYM-326C5369/2023,FL.1 +England/PLYM-326C5202/2023,FL.1 +England/BRBR-326B049B/2023,FL.1 +England/BRBR-326B053E/2023,FL.1 +England/PLYM-326B5171/2023,FL.1 +England/PLYM-326B534E/2023,FL.1 +England/PLYM-326B5A2B/2023,FL.1 +England/PLYM-326B5B19/2023,FL.1 +England/PLYM-326B5302/2023,FL.1 +England/PLYM-326B5A76/2023,FL.1 +England/PLYM-326B5135/2023,FL.1 +England/PLYM-326B5B91/2023,FL.1 +England/PLYM-326B5AFE/2023,FL.1 +England/PLYM-326B533F/2023,FL.1 +England/PLYM-326B52E7/2023,FL.1 +England/PLYM-326B5056/2023,FL.1 +England/BRBR-326B0352/2023,FL.1 +England/BRBR-326B0501/2023,FL.1 +England/BRBR-326B057A/2023,FL.1 +England/BRBR-326B045F/2023,FL.1 +England/PLYM-326B5A0D/2023,FL.1 +England/PLYM-326C51AB/2023,FL.1 +USA/MN-CDC-VSX-A073795/2023,FL.1 +USA/MN-CDC-VSX-A00580/2023,FL.1 +USA/MN-CDC-VSX-A00468/2023,FL.1 +USA/MN-MDH-33731/2023,FL.1 +USA/MN-CDC-QDX47772227/2023,FL.1 +USA/MN-CDC-QDX47493252/2023,FL.1 +USA/TX-CDC-QDX47145173/2023,FL.1 +USA/MN-MDH-34064/2023,FL.1 +Israel/ICH-741196589/2023,FL.1 +Netherlands/NH-AUMC-000770/2023,FL.1 +England/BRBR-326FE604/2023,FL.1 +Singapore/R18MR84/2023,FL.1 +England/BRBR-3270B06F/2023,FL.1 +Australia/NSW-ICPMR-42912/2023,FL.1 +Australia/NSW-ICPMR-43799/2023,FL.1 +Australia/NSW-ICPMR-43807/2023,FL.1 +Australia/NSW-ICPMR-42905/2023,FL.1 +Australia/NSW-ICPMR-43424/2023,FL.1 +Australia/NSW-ICPMR-43265/2023,FL.1 +USA/NJ-GBW-H10-011-5821/2023,FL.1 +USA/CA-GBW-H10-010-9218/2023,FL.1 +USA/CA-GBW-H20-278-7850/2023,FL.1 +USA/NY-GBW-H20-306-6224/2023,FL.1 +USA/CA-GBW-H20-278-7842/2023,FL.1 +USA/VA-GBW-H10-011-4849/2023,FL.1 +USA/VA-GBW-H20-283-0759/2023,FL.1 +USA/NY-GBW-H20-290-3375/2023,FL.1 +USA/CA-GBW-H20-305-1291/2023,FL.1 +USA/CA-GBW-H20-278-7846/2023,FL.1 diff --git a/pango_designation/alias_key.json b/pango_designation/alias_key.json index f5722c2a..b0d46c3e 100644 --- a/pango_designation/alias_key.json +++ b/pango_designation/alias_key.json @@ -141,6 +141,7 @@ "FH": "XBB.1.5.17", "FJ": "B.1.1.529.2.75.3.4.1.1.1.1.19", "FK": "B.1.1.529.2.75.3.4.1.1.1.1.17", + "FL": "XBB.1.9.1", "XA": ["B.1.1.7","B.1.177"], "XB": ["B.1.634","B.1.631"], "XC": ["AY.29","B.1.1.7"],