From 1c368f3f3cbc5bd1d30d598d52c82fae3fcc8eaf Mon Sep 17 00:00:00 2001 From: Cornelius Roemer Date: Fri, 5 May 2023 22:38:10 +0200 Subject: [PATCH] Designate FE.1.2 (A5488G) with 180 sequences, add extra FE.1 --- lineage_notes.txt | 1 + lineages.csv | 247 +++++++++++++++++++++++++++++++++++++++++++--- 2 files changed, 232 insertions(+), 16 deletions(-) diff --git a/lineage_notes.txt b/lineage_notes.txt index 44aa1442..e720da4c 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -2727,6 +2727,7 @@ XBB.1.18 Defined by A8001G, Brazil XBB.1.18.1 Defined by S:F486P, Brazil FE.1 Alias of XBB.1.18.1.1, S:F456L, Brazil/Chile FE.1.1 Alias of XBB.1.18.1.1.1, ORF8:S67F, T4579A +FE.1.2 Alias of XBB.1.18.1.1.2, A5488G XBB.1.19 Defined by S:486P, C541T, A10042G, T21363C, pre ORF8:8*, Pakistan, from #1680 XBB.1.19.1 Defined by S:E554K XBB.1.20 Defined by C541T, ORF3a:A72V, ORF1a:P4312T, pre ORF8:8*, Malaysia diff --git a/lineages.csv b/lineages.csv index eb10dfb6..b3a6feb1 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2351273,28 +2351273,12 @@ Canada/QC-L00591172001/2023,FD.1.1 Canada/QC-L00588293001/2023,FD.1.1 Canada/QC-L00591187001/2023,FD.1.1 Canada/QC-L00591151001/2023,FD.1.1 -Chile/RM-15680/2023,FE.1 England/PHEP-YYGMF3C/2023,FE.1 -USA/IN-CDC-LC0988006/2023,FE.1 -Brazil/SP-IB_CEVC_2205609/2023,FE.1 -Brazil/SP-IB_CEVC_2205608/2023,FE.1 -Brazil/SP-AR-1203/2023,FE.1 -USA/NY-PRL-230309_81D01/2023,FE.1 -Brazil/SP-IB_CEVC_2206055/2023,FE.1 -Canada/ON-KHS-23-02899-v1/2023,FE.1 -Chile/RM-15124/2023,FE.1 -Japan/IC-16335/2023,FE.1 Brazil/SP-IB_CEVC_2206051/2023,FE.1 Brazil/SP-IB_CEVC_2206041/2023,FE.1 -Chile/RM-15678/2023,FE.1 -Brazil/SP-IB_CEVC_2206061/2023,FE.1 -Brazil/SP-IB_CEVC_2206054/2023,FE.1 Brazil/SP-IB_CEVC_2206052/2023,FE.1 Brazil/SP-HIAE-ID2453/2023,FE.1 Brazil/SP-IB_CEVC_2206053/2023,FE.1 -Brazil/SP-IB_CEVC_2206049/2023,FE.1 -Brazil/SP-IB_CEVC_2206045/2023,FE.1 -Brazil/SP-IB_CEVC_2206050/2023,FE.1 Brazil/SP-IB_CEVC_2206043/2023,FE.1 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