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DESCRIPTION
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DESCRIPTION
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Package: cmapR
Type: Package
Title: CMap Tools in R
Date: 2021-09-22
Version: 1.5.3
Authors@R: person("Ted", "Natoli", email="[email protected]",
role=c("aut", "cre"), comment=c(ORCID="0000-0002-0953-0206"))
Description: The Connectivity Map (CMap) is a massive resource of perturbational
gene expression profiles built by researchers at the Broad Institute and
funded by the NIH Library of Integrated Network-Based Cellular Signatures
(LINCS) program. Please visit https://clue.io for more information.
The cmapR package implements methods to parse, manipulate, and write common
CMap data objects, such as annotated matrices and collections of gene sets.
License: file LICENSE
Depends: R (>= 4.0)
Imports:
methods,
rhdf5,
data.table,
flowCore,
SummarizedExperiment,
matrixStats
Suggests: knitr, testthat, BiocStyle, rmarkdown
VignetteBuilder: knitr
biocViews: DataImport, DataRepresentation, GeneExpression
URL: https://github.com/cmap/cmapR
BugReports: https://github.com/cmap/cmapR/issues
LazyData: true
RoxygenNote: 7.1.1