You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
When I run the command:
spark-submit --class com.github.sparkbwa.SparkBWA --master local
--driver-memory 1500m --executor-memory 1g --executor-cores 2 --verbose
--num-executors 1 /hdd/diksha/SparkBWA-0.2.jar -m -r -s --index /hdd/diksha/hg38 -n 1
/user/dreamlab/diksha_sample/1.fastq /user/dreamlab/diksha_sample/
I get the following error:
java.io.FileNotFoundException: File does not exist: /user/dreamlab/diksha_sample/1.fastq
The file was present on that path before running the above command. After the command is run, the file from the path gets deleted and I get the error- 'file not found'.
How to deal with the issue?
The text was updated successfully, but these errors were encountered:
When I run the command:
spark-submit --class com.github.sparkbwa.SparkBWA --master local
--driver-memory 1500m --executor-memory 1g --executor-cores 2 --verbose
--num-executors 1 /hdd/diksha/SparkBWA-0.2.jar -m -r -s --index /hdd/diksha/hg38 -n 1
/user/dreamlab/diksha_sample/1.fastq /user/dreamlab/diksha_sample/
I get the following error:
java.io.FileNotFoundException: File does not exist: /user/dreamlab/diksha_sample/1.fastq
The file was present on that path before running the above command. After the command is run, the file from the path gets deleted and I get the error- 'file not found'.
How to deal with the issue?
The text was updated successfully, but these errors were encountered: