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Workshop on Clinical and Environmental Metagenome Analysis CINEMA 2023 materials. Additional materials can be found on our CINEMA 2023 Box folder.
Before the course
You will need to bring a laptop to actively participate in this course. We can provide user access to our virtual machines during the workshop if needed.
Rice Global Paris Center
Wifi: RGP Center Guest
PW: RICE*Guest
Gate code: 15B87
"Using revived 100-year old bacteria and new algorithms to study plasmid evolution" (Dr. Zamin Iqbal)
17h00-18h00
social hour
Saturday, 8 July
Time
Putting it all together (bring your own dataset else example data will be provided)
9h30-10h30
Linux and bioinformatics tips (Kristen and Todd)[first][second]
10h30-12h30
Analyzing data on your own, session 1
12h30-13h30
lunch/networking
13h30-15h30
Analyzing data on your own (+slide prep for Sunday), session 2
15h30-16h00
coffee break
16h00-17h00
“SARS CoV 2 genome monitoring in wastewater by the French OBEPINE network, deciphering the viral dynamics and VOC evolution” (Dr. Laurent Moulin, Eau de Paris)