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Error in ScaleData(): ! No layer matching pattern 'data' found. Please run NormalizeData and retry Run rlang::last_trace() to see where the error occurred. #664

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Noralii opened this issue May 24, 2024 · 3 comments

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@Noralii
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Noralii commented May 24, 2024

Error in ScaleData():
! No layer matching pattern 'data' found. Please run NormalizeData and retry
Run rlang::last_trace() to see where the error occurred.

@xiaoli-gg
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Dear friends:
I am also confused by this Error. Have you solved this problem?
Hope to get your advice.
Thanks
Mengpan Li

@Tang-RH
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Tang-RH commented Oct 7, 2024

The error may be coused by Seurat V5, please check this answer:
#617 (comment)
Using the following command to convert the seurat object format to v3 before running seems to work temporarily:

options("Seurat.object.assay.version" = "v3")

@xiaoli-gg
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Dear friends, thanks for your advice.

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