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Mutect2 warns but does not fail when three or more reads have the same name #6240

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merged 1 commit into from
Nov 18, 2019

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davidbenjamin
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@takutosato We have seen samples with a handful of cases and I would rather not force users to run with --independent-mates just to avoid an error at a few sites.

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Sorry for taking so long to respond David, this PR totally slipped my mind

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2 participants