From cd4636d65676114700c38ec454f09158c9e88e2c Mon Sep 17 00:00:00 2001 From: meganshand Date: Tue, 22 Sep 2020 14:28:15 -0400 Subject: [PATCH] updating ArrayCalculateMetrics for new genotype counts table (#6843) --- .../tools/variantdb/arrays/ArrayCalculateMetrics.java | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/main/java/org/broadinstitute/hellbender/tools/variantdb/arrays/ArrayCalculateMetrics.java b/src/main/java/org/broadinstitute/hellbender/tools/variantdb/arrays/ArrayCalculateMetrics.java index a1cb6243e45..9814b493e80 100644 --- a/src/main/java/org/broadinstitute/hellbender/tools/variantdb/arrays/ArrayCalculateMetrics.java +++ b/src/main/java/org/broadinstitute/hellbender/tools/variantdb/arrays/ArrayCalculateMetrics.java @@ -44,7 +44,7 @@ public class ArrayCalculateMetrics extends GATKTool { public enum HeaderFieldEnum { probe_id, - hwe_pval, + excess_het, call_rate, invariant }