diff --git a/src/main/java/org/broadinstitute/hellbender/tools/walkers/annotator/RMSMappingQuality.java b/src/main/java/org/broadinstitute/hellbender/tools/walkers/annotator/RMSMappingQuality.java
index a9338a74a6a..3c0e834bc63 100644
--- a/src/main/java/org/broadinstitute/hellbender/tools/walkers/annotator/RMSMappingQuality.java
+++ b/src/main/java/org/broadinstitute/hellbender/tools/walkers/annotator/RMSMappingQuality.java
@@ -61,7 +61,7 @@ public final class RMSMappingQuality extends InfoFieldAnnotation implements Stan
     @Override
     public List<String> getRawKeyNames() { return Arrays.asList(GATKVCFConstants.RAW_MAPPING_QUALITY_WITH_DEPTH_KEY);}   //new key for the two-value MQ data to prevent version mismatch catastrophes
 
-    public static String getDeprecatedRawKeyName() { return GATKVCFConstants.RAW_RMS_MAPPING_QUALITY_KEY;}   //new key for the two-value MQ data to prevent version mismatch catastrophes
+    public static String getDeprecatedRawKeyName() { return GATKVCFConstants.RAW_RMS_MAPPING_QUALITY_KEY;}   //old key that used the janky depth estimation method
 
     @Override
     public List<String> getKeyNames() {
@@ -135,7 +135,7 @@ public Map<String, Object> finalizeRawData(final VariantContext vc, final Varian
         else if (vc.hasAttribute(getDeprecatedRawKeyName())) {
             if (!allowOlderRawKeyValues) {
                 throw new UserException.BadInput("Presence of '-"+getDeprecatedRawKeyName()+"' annotation is detected. This GATK version expects key "
-                        + getRawKeyNames() + " with a tuple of sum of squared MQ values and total reads over variant "
+                        + getRawKeyNames().get(0) + " with a tuple of sum of squared MQ values and total reads over variant "
                         + "genotypes as the value. This could indicate that the provided input was produced with an older version of GATK. " +
                         "Use the argument '--"+RMS_MAPPING_QUALITY_OLD_BEHAVIOR_OVERRIDE_ARGUMENT+"' to override and attempt the deprecated MQ calculation. There " +
                         "may be differences in how newer GATK versions calculate DP and MQ that may result in worse MQ results. Use at your own risk.");
@@ -155,7 +155,7 @@ else if (vc.hasAttribute(getDeprecatedRawKeyName())) {
             }
             else {
                 logger.warn("MQ annotation data is not properly formatted. This GATK version expects key "
-                        + getRawKeyNames() + " with a tuple of sum of squared MQ values and total reads over variant "
+                        + getRawKeyNames().get(0) + " with a tuple of sum of squared MQ values and total reads over variant "
                         + "genotypes as the value. Attempting to use deprecated MQ calculation.");
                 final long numOfReads = getNumOfReads(vc, null);
                 rawMQdata = Math.round(Double.parseDouble(rawMQdata)) + "," + numOfReads;   //deprecated format was double so it needs to be converted to long
diff --git a/src/main/java/org/broadinstitute/hellbender/tools/walkers/annotator/VariantAnnotatorEngine.java b/src/main/java/org/broadinstitute/hellbender/tools/walkers/annotator/VariantAnnotatorEngine.java
index f9bb13fca9f..397cc357f21 100644
--- a/src/main/java/org/broadinstitute/hellbender/tools/walkers/annotator/VariantAnnotatorEngine.java
+++ b/src/main/java/org/broadinstitute/hellbender/tools/walkers/annotator/VariantAnnotatorEngine.java
@@ -205,7 +205,7 @@ public Map<String, Object> combineAnnotations(final List<Allele> allelesList, Ma
                         final List<ReducibleAnnotationData<?>> annotationValue = (List<ReducibleAnnotationData<?>>) annotationMap.get(currentASannotation.getRawKeyNames().get(0));
                         final Map<String, Object> annotationsFromCurrentType = currentASannotation.combineRawData(allelesList, annotationValue);
                         combinedAnnotations.putAll(annotationsFromCurrentType);
-                        //remove the combined annotations so that the next method only processes the non-reducible ones
+                        //remove all the raw keys for the annotation because we already used all of them in combineRawData
                         for (final String rk : currentASannotation.getRawKeyNames()) {
                             annotationMap.remove(rk);
                         }
diff --git a/src/test/resources/org/broadinstitute/hellbender/tools/walkers/GenotypeGVCFs/withOxoGReadCounts.vcf b/src/test/resources/org/broadinstitute/hellbender/tools/walkers/GenotypeGVCFs/withOxoGReadCounts.vcf
index 6164a344751..7255b43da27 100644
--- a/src/test/resources/org/broadinstitute/hellbender/tools/walkers/GenotypeGVCFs/withOxoGReadCounts.vcf
+++ b/src/test/resources/org/broadinstitute/hellbender/tools/walkers/GenotypeGVCFs/withOxoGReadCounts.vcf
@@ -14,19 +14,11 @@
 ##FORMAT=<ID=PS,Number=1,Type=Integer,Description="Phasing set (typically the position of the first variant in the set)">
 ##FORMAT=<ID=RGQ,Number=1,Type=Integer,Description="Unconditional reference genotype confidence, encoded as a phred quality -10*log10 p(genotype call is wrong)">
 ##FORMAT=<ID=SB,Number=4,Type=Integer,Description="Per-sample component statistics which comprise the Fisher's Exact Test to detect strand bias.">
-##GATKCommandLine=<ID=GenotypeGVCFs,CommandLine="GenotypeGVCFs  --output /var/folders/v5/gbkn5lv95c51kj3xpx5pzncscnxf_m/T/genotypegvcf3333414066588121932.vcf --variant /Users/gauthier/workspaces/gatk/src/test/resources/org/broadinstitute/hellbender/tools/walkers/GenotypeGVCFs/withOxoGReadCounts.g.vcf --reference /Users/gauthier/workspaces/gatk/src/test/resources/large/human_g1k_v37.20.21.fasta --verbosity ERROR --annotation-group AS_StandardAnnotation --annotation-group StandardAnnotation --allow-old-rms-mapping-quality-annotation-data true  --include-non-variant-sites false --merge-input-intervals false --input-is-somatic false --tumor-lod-to-emit 3.5 --allele-fraction-error 0.001 --keep-combined-raw-annotations false --use-new-qual-calculator true --annotate-with-num-discovered-alleles false --heterozygosity 0.001 --indel-heterozygosity 1.25E-4 --heterozygosity-stdev 0.01 --standard-min-confidence-threshold-for-calling 30.0 --max-alternate-alleles 6 --max-genotype-count 1024 --sample-ploidy 2 --num-reference-samples-if-no-call 0 --only-output-calls-starting-in-intervals false --interval-set-rule UNION --interval-padding 0 --interval-exclusion-padding 0 --interval-merging-rule ALL --read-validation-stringency SILENT --seconds-between-progress-updates 10.0 --disable-sequence-dictionary-validation false --create-output-bam-index true --create-output-bam-md5 false --create-output-variant-index true --create-output-variant-md5 false --lenient false --add-output-sam-program-record true --add-output-vcf-command-line true --cloud-prefetch-buffer 40 --cloud-index-prefetch-buffer -1 --disable-bam-index-caching false --sites-only-vcf-output false --help false --version false --showHidden false --QUIET false --use-jdk-deflater false --use-jdk-inflater false --gcs-max-retries 20 --gcs-project-for-requester-pays  --disable-tool-default-read-filters false --disable-tool-default-annotations false --enable-all-annotations false",Version="Unavailable",Date="September 17, 2019 5:04:17 PM EDT">
+##GATKCommandLine=<ID=GenotypeGVCFs,CommandLine="GenotypeGVCFs  --output src/test/resources/org/broadinstitute/hellbender/tools/walkers/GenotypeGVCFs/withOxoGReadCounts.vcf --variant src/test/resources/org/broadinstitute/hellbender/tools/walkers/GenotypeGVCFs/withOxoGReadCounts.g.vcf --reference src/test/resources/large/human_g1k_v37.20.21.fasta --annotation-group StandardAnnotation --annotation-group StandardHCAnnotation  --include-non-variant-sites false --input-is-somatic false --tumor-lod-to-emit 3.5 --allele-fraction-error 0.001 --use-new-qual-calculator true --use-old-qual-calculator false --annotate-with-num-discovered-alleles false --heterozygosity 0.001 --indel-heterozygosity 1.25E-4 --heterozygosity-stdev 0.01 --standard-min-confidence-threshold-for-calling 30.0 --max-alternate-alleles 6 --max-genotype-count 1024 --sample-ploidy 2 --num-reference-samples-if-no-call 0 --only-output-calls-starting-in-intervals false --interval-set-rule UNION --interval-padding 0 --interval-exclusion-padding 0 --interval-merging-rule ALL --read-validation-stringency SILENT --seconds-between-progress-updates 10.0 --disable-sequence-dictionary-validation false --create-output-bam-index true --create-output-bam-md5 false --create-output-variant-index true --create-output-variant-md5 false --lenient false --add-output-sam-program-record true --add-output-vcf-command-line true --cloud-prefetch-buffer 40 --cloud-index-prefetch-buffer -1 --disable-bam-index-caching false --sites-only-vcf-output false --help false --version false --showHidden false --verbosity INFO --QUIET false --use-jdk-deflater false --use-jdk-inflater false --gcs-max-retries 20 --gcs-project-for-requester-pays  --disable-tool-default-read-filters false --disable-tool-default-annotations false --enable-all-annotations false",Version=4.1.0.0-62-g811e72a-SNAPSHOT,Date="March 15, 2019 4:01:37 PM EDT">
 ##GATKCommandLine=<ID=HaplotypeCaller,CommandLine="HaplotypeCaller  --emit-ref-confidence GVCF --output src/test/resources/org/broadinstitute/hellbender/tools/walkers/GenotypeGVCFs/withOxoGReadCounts.g.vcf --intervals 20:10100000-10150000 --input src/test/resources/large/CEUTrio.HiSeq.WGS.b37.NA12878.20.21.bam --reference src/test/resources/large/human_g1k_v37.20.21.fasta --annotation OxoGReadCounts --annotation-group StandardAnnotation --annotation-group StandardHCAnnotation  --gvcf-gq-bands 1 --gvcf-gq-bands 2 --gvcf-gq-bands 3 --gvcf-gq-bands 4 --gvcf-gq-bands 5 --gvcf-gq-bands 6 --gvcf-gq-bands 7 --gvcf-gq-bands 8 --gvcf-gq-bands 9 --gvcf-gq-bands 10 --gvcf-gq-bands 11 --gvcf-gq-bands 12 --gvcf-gq-bands 13 --gvcf-gq-bands 14 --gvcf-gq-bands 15 --gvcf-gq-bands 16 --gvcf-gq-bands 17 --gvcf-gq-bands 18 --gvcf-gq-bands 19 --gvcf-gq-bands 20 --gvcf-gq-bands 21 --gvcf-gq-bands 22 --gvcf-gq-bands 23 --gvcf-gq-bands 24 --gvcf-gq-bands 25 --gvcf-gq-bands 26 --gvcf-gq-bands 27 --gvcf-gq-bands 28 --gvcf-gq-bands 29 --gvcf-gq-bands 30 --gvcf-gq-bands 31 --gvcf-gq-bands 32 --gvcf-gq-bands 33 --gvcf-gq-bands 34 --gvcf-gq-bands 35 --gvcf-gq-bands 36 --gvcf-gq-bands 37 --gvcf-gq-bands 38 --gvcf-gq-bands 39 --gvcf-gq-bands 40 --gvcf-gq-bands 41 --gvcf-gq-bands 42 --gvcf-gq-bands 43 --gvcf-gq-bands 44 --gvcf-gq-bands 45 --gvcf-gq-bands 46 --gvcf-gq-bands 47 --gvcf-gq-bands 48 --gvcf-gq-bands 49 --gvcf-gq-bands 50 --gvcf-gq-bands 51 --gvcf-gq-bands 52 --gvcf-gq-bands 53 --gvcf-gq-bands 54 --gvcf-gq-bands 55 --gvcf-gq-bands 56 --gvcf-gq-bands 57 --gvcf-gq-bands 58 --gvcf-gq-bands 59 --gvcf-gq-bands 60 --gvcf-gq-bands 70 --gvcf-gq-bands 80 --gvcf-gq-bands 90 --gvcf-gq-bands 99 --indel-size-to-eliminate-in-ref-model 10 --use-alleles-trigger false --disable-optimizations false --just-determine-active-regions false --dont-genotype false --max-mnp-distance 0 --dont-trim-active-regions false --max-disc-ar-extension 25 --max-gga-ar-extension 300 --padding-around-indels 150 --padding-around-snps 20 --adaptive-pruning false --do-not-recover-dangling-branches false --recover-dangling-heads false --consensus false --kmer-size 10 --kmer-size 25 --dont-increase-kmer-sizes-for-cycles false --allow-non-unique-kmers-in-ref false --num-pruning-samples 1 --min-dangling-branch-length 4 --recover-all-dangling-branches false --max-num-haplotypes-in-population 128 --min-pruning 2 --adaptive-pruning-initial-error-rate 0.001 --pruning-lod-threshold 1.0 --max-unpruned-variants 100 --debug-graph-transformations false --kmer-length-for-read-error-correction 25 --min-observations-for-kmer-to-be-solid 20 --likelihood-calculation-engine PairHMM --base-quality-score-threshold 18 --pair-hmm-gap-continuation-penalty 10 --pair-hmm-implementation FASTEST_AVAILABLE --pcr-indel-model CONSERVATIVE --phred-scaled-global-read-mismapping-rate 45 --native-pair-hmm-threads 4 --native-pair-hmm-use-double-precision false --debug false --use-filtered-reads-for-annotations false --bam-writer-type CALLED_HAPLOTYPES --dont-use-soft-clipped-bases false --capture-assembly-failure-bam false --error-correct-reads false --do-not-run-physical-phasing false --min-base-quality-score 10 --smith-waterman JAVA --correct-overlapping-quality false --use-new-qual-calculator true --use-old-qual-calculator false --annotate-with-num-discovered-alleles false --heterozygosity 0.001 --indel-heterozygosity 1.25E-4 --heterozygosity-stdev 0.01 --standard-min-confidence-threshold-for-calling 30.0 --max-alternate-alleles 6 --max-genotype-count 1024 --sample-ploidy 2 --num-reference-samples-if-no-call 0 --genotyping-mode DISCOVERY --genotype-filtered-alleles false --contamination-fraction-to-filter 0.0 --output-mode EMIT_VARIANTS_ONLY --all-site-pls false --min-assembly-region-size 50 --max-assembly-region-size 300 --assembly-region-padding 100 --max-reads-per-alignment-start 50 --active-probability-threshold 0.002 --max-prob-propagation-distance 50 --force-active false --interval-set-rule UNION --interval-padding 0 --interval-exclusion-padding 0 --interval-merging-rule ALL --read-validation-stringency SILENT --seconds-between-progress-updates 10.0 --disable-sequence-dictionary-validation false --create-output-bam-index true --create-output-bam-md5 false --create-output-variant-index true --create-output-variant-md5 false --lenient false --add-output-sam-program-record true --add-output-vcf-command-line true --cloud-prefetch-buffer 40 --cloud-index-prefetch-buffer -1 --disable-bam-index-caching false --sites-only-vcf-output false --help false --version false --showHidden false --verbosity INFO --QUIET false --use-jdk-deflater false --use-jdk-inflater false --gcs-max-retries 20 --gcs-project-for-requester-pays  --disable-tool-default-read-filters false --minimum-mapping-quality 20 --disable-tool-default-annotations false --enable-all-annotations false",Version=4.1.0.0-48-geb9c265-SNAPSHOT,Date="March 15, 2019 2:49:52 PM EDT">
 ##INFO=<ID=AC,Number=A,Type=Integer,Description="Allele count in genotypes, for each ALT allele, in the same order as listed">
 ##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency, for each ALT allele, in the same order as listed">
 ##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
-##INFO=<ID=AS_BaseQRankSum,Number=A,Type=Float,Description="allele specific Z-score from Wilcoxon rank sum test of each Alt Vs. Ref base qualities">
-##INFO=<ID=AS_FS,Number=A,Type=Float,Description="allele specific phred-scaled p-value using Fisher's exact test to detect strand bias of each alt allele">
-##INFO=<ID=AS_InbreedingCoeff,Number=A,Type=Float,Description="allele specific heterozygosity as estimated from the genotype likelihoods per-sample when compared against the Hardy-Weinberg expectation; relate to inbreeding coefficient">
-##INFO=<ID=AS_MQ,Number=A,Type=Float,Description="Allele-specific RMS Mapping Quality">
-##INFO=<ID=AS_MQRankSum,Number=A,Type=Float,Description="Allele-specific Mapping Quality Rank Sum">
-##INFO=<ID=AS_QD,Number=A,Type=Float,Description="Allele-specific Variant Confidence/Quality by Depth">
-##INFO=<ID=AS_ReadPosRankSum,Number=A,Type=Float,Description="allele specific Z-score from Wilcoxon rank sum test of each Alt vs. Ref read position bias">
-##INFO=<ID=AS_SOR,Number=A,Type=Float,Description="Allele specific strand Odds Ratio of 2x|Alts| contingency table to detect allele specific strand bias">
 ##INFO=<ID=BaseQRankSum,Number=1,Type=Float,Description="Z-score from Wilcoxon rank sum test of Alt Vs. Ref base qualities">
 ##INFO=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth; some reads may have been filtered">
 ##INFO=<ID=DS,Number=0,Type=Flag,Description="Were any of the samples downsampled?">
@@ -47,112 +39,112 @@
 ##source=GenotypeGVCFs
 ##source=HaplotypeCaller
 #CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NA12878
-20	10100468	.	T	C	897.60	.	AC=1;AF=0.500;AN=2;AS_QD=14.03;BaseQRankSum=-2.297e+00;DP=64;ExcessHet=3.0103;FS=3.431;MLEAC=1;MLEAF=0.500;MQ=58.38;MQRankSum=-7.060e-01;QD=14.03;ReadPosRankSum=-7.850e-01;SOR=1.179	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:36,28:64:16,10:20,18:99:905,0,1299
-20	10100539	.	CTTCTAG	C	1374.60	.	AC=1;AF=0.500;AN=2;AS_QD=18.58;BaseQRankSum=0.988;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.76;MQRankSum=-5.036e+00;QD=18.58;ReadPosRankSum=-3.220e-01;SOR=0.709	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:38,36:74:21,16:17,20:99:1382,0,1739
-20	10100845	.	G	C	1144.60	.	AC=1;AF=0.500;AN=2;AS_QD=15.27;BaseQRankSum=0.628;DP=75;ExcessHet=3.0103;FS=1.900;MLEAC=1;MLEAF=0.500;MQ=55.61;MQRankSum=-3.789e+00;QD=15.26;ReadPosRankSum=-9.230e-01;SOR=0.889	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:39,36:75:23,17:16,19:99:1152,0,1353
-20	10101268	.	TAA	T	890.60	.	AC=1;AF=0.500;AN=2;AS_QD=14.61;BaseQRankSum=1.44;DP=70;ExcessHet=3.0103;FS=0.990;MLEAC=1;MLEAF=0.500;MQ=59.05;MQRankSum=-1.830e-01;QD=14.60;ReadPosRankSum=1.56;SOR=0.870	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:35,26:61:16,11:19,15:99:898,0,1254
-20	10101288	.	A	G	1006.60	.	AC=1;AF=0.500;AN=2;AS_QD=14.81;BaseQRankSum=-8.580e-01;DP=68;ExcessHet=3.0103;FS=2.070;MLEAC=1;MLEAF=0.500;MQ=58.42;MQRankSum=-1.619e+00;QD=14.80;ReadPosRankSum=-1.793e+00;SOR=1.040	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:37,31:68:16,12:21,19:99:1014,0,1275
-20	10101674	.	TTGTG	T,TTGTGTGTGTG	1464.10	.	AC=1,1;AF=0.500,0.500;AN=2;AS_QD=27.41,11.17;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1,1;MLEAF=0.500,0.500;MQ=55.43;QD=25.36;SOR=1.002	GT:AD:DP:F1R2:F2R1:GQ:PL	1/2:0,22,6:35:0,13,3:0,9,3:99:1481,557,581,932,0,925
-20	10101880	.	A	G	1599.60	.	AC=1;AF=0.500;AN=2;AS_QD=19.28;BaseQRankSum=-1.644e+00;DP=83;ExcessHet=3.0103;FS=1.801;MLEAC=1;MLEAF=0.500;MQ=59.44;MQRankSum=-1.228e+00;QD=19.27;ReadPosRankSum=-1.650e+00;SOR=0.736	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:36,47:83:17,30:19,17:99:1607,0,1223
-20	10101912	.	C	T	1588.60	.	AC=1;AF=0.500;AN=2;AS_QD=18.69;BaseQRankSum=2.45;DP=85;ExcessHet=3.0103;FS=0.811;MLEAC=1;MLEAF=0.500;MQ=58.91;MQRankSum=-1.863e+00;QD=18.69;ReadPosRankSum=-1.024e+00;SOR=0.604	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:39,46:85:20,25:19,21:99:1596,0,1309
-20	10102234	.	C	T	1259.60	.	AC=1;AF=0.500;AN=2;AS_QD=22.91;BaseQRankSum=-1.191e+00;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.87;MQRankSum=-2.028e+00;QD=22.90;ReadPosRankSum=0.442;SOR=0.711	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:24,31:55:10,17:14,14:99:0|1:10102234_C_T:1267,0,2599:10102234
-20	10102247	.	G	A	1299.60	.	AC=1;AF=0.500;AN=2;AS_QD=23.64;BaseQRankSum=1.34;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.87;MQRankSum=-2.028e+00;QD=23.63;ReadPosRankSum=1.32;SOR=0.711	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:24,31:55:9,16:15,15:99:0|1:10102234_C_T:1307,0,2634:10102234
-20	10102248	.	T	C	1299.60	.	AC=1;AF=0.500;AN=2;AS_QD=22.81;BaseQRankSum=-7.830e-01;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.95;MQRankSum=-1.962e+00;QD=22.80;ReadPosRankSum=0.938;SOR=0.784	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:24,33:57:9,16:15,17:99:0|1:10102234_C_T:1307,0,2634:10102234
-20	10102363	.	A	T	1235.60	.	AC=1;AF=0.500;AN=2;AS_QD=17.91;BaseQRankSum=-2.120e-01;DP=69;ExcessHet=3.0103;FS=2.050;MLEAC=1;MLEAF=0.500;MQ=59.46;MQRankSum=-1.384e+00;QD=17.91;ReadPosRankSum=0.018;SOR=0.438	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:34,35:69:18,19:16,16:99:1243,0,1226
-20	10102530	.	C	T	717.60	.	AC=1;AF=0.500;AN=2;AS_QD=18.89;BaseQRankSum=0.212;DP=38;ExcessHet=3.0103;FS=1.463;MLEAC=1;MLEAF=0.500;MQ=59.39;MQRankSum=-9.470e-01;QD=18.88;ReadPosRankSum=0.614;SOR=0.330	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:19,19:38:11,12:8,7:99:0|1:10102530_C_T:725,0,1412:10102530
-20	10102531	.	A	G	717.60	.	AC=1;AF=0.500;AN=2;AS_QD=19.94;BaseQRankSum=-2.540e+00;DP=36;ExcessHet=3.0103;FS=1.480;MLEAC=1;MLEAF=0.500;MQ=59.36;MQRankSum=-9.440e-01;QD=19.93;ReadPosRankSum=0.554;SOR=0.324	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:18,18:36:10,11:8,7:99:0|1:10102530_C_T:725,0,1412:10102530
-20	10102727	.	G	T	1162.60	.	AC=1;AF=0.500;AN=2;AS_QD=17.10;BaseQRankSum=5.66;DP=68;ExcessHet=3.0103;FS=2.067;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.00;QD=17.10;ReadPosRankSum=1.30;SOR=0.996	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:35,33:68:18,13:17,20:99:1170,0,1022
-20	10102904	.	C	A	1925.60	.	AC=1;AF=0.500;AN=2;AS_QD=19.26;BaseQRankSum=2.12;DP=100;ExcessHet=3.0103;FS=1.625;MLEAC=1;MLEAF=0.500;MQ=59.35;MQRankSum=-1.571e+00;QD=19.26;ReadPosRankSum=-3.120e-01;SOR=0.698	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:45,55:100:21,26:24,29:99:1933,0,1459
-20	10103110	.	G	C	1604.60	.	AC=1;AF=0.500;AN=2;AS_QD=20.32;BaseQRankSum=-2.641e+00;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.99;MQRankSum=-6.930e-01;QD=20.31;ReadPosRankSum=0.283;SOR=0.627	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:33,46:79:19,26:14,20:99:1612,0,1136
-20	10103301	.	C	T	932.60	.	AC=1;AF=0.500;AN=2;AS_QD=13.33;BaseQRankSum=1.79;DP=70;ExcessHet=3.0103;FS=0.917;MLEAC=1;MLEAF=0.500;MQ=59.67;MQRankSum=-9.050e-01;QD=13.32;ReadPosRankSum=-6.660e-01;SOR=0.562	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:42,28:70:16,12:26,16:99:940,0,1468
-20	10103320	.	G	C	842.60	.	AC=1;AF=0.500;AN=2;AS_QD=13.82;BaseQRankSum=4.67;DP=61;ExcessHet=3.0103;FS=0.984;MLEAC=1;MLEAF=0.500;MQ=59.62;MQRankSum=-8.610e-01;QD=13.81;ReadPosRankSum=0.675;SOR=0.678	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:36,25:61:10,12:26,13:99:850,0,1147
-20	10103333	.	G	A	936.60	.	AC=1;AF=0.500;AN=2;AS_QD=16.16;BaseQRankSum=1.31;DP=58;ExcessHet=3.0103;FS=7.270;MLEAC=1;MLEAF=0.500;MQ=59.76;MQRankSum=-1.504e+00;QD=16.15;ReadPosRankSum=-1.480e-01;SOR=0.888	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:31,27:58:10,14:21,13:99:944,0,1116
-20	10103552	.	T	G	1165.60	.	AC=1;AF=0.500;AN=2;AS_QD=15.55;BaseQRankSum=-1.534e+00;DP=75;ExcessHet=3.0103;FS=9.987;MLEAC=1;MLEAF=0.500;MQ=59.10;MQRankSum=-2.379e+00;QD=15.54;ReadPosRankSum=0.992;SOR=1.723	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:39,36:75:17,25:22,11:99:1173,0,1349
-20	10103680	.	G	T	1373.60	.	AC=1;AF=0.500;AN=2;AS_QD=17.39;BaseQRankSum=0.730;DP=79;ExcessHet=3.0103;FS=1.838;MLEAC=1;MLEAF=0.500;MQ=58.64;MQRankSum=-7.690e-01;QD=17.39;ReadPosRankSum=-9.220e-01;SOR=0.864	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:39,40:79:17,25:22,15:99:1381,0,1262
-20	10103751	.	G	T	999.60	.	AC=1;AF=0.500;AN=2;AS_QD=17.54;BaseQRankSum=3.02;DP=57;ExcessHet=3.0103;FS=3.657;MLEAC=1;MLEAF=0.500;MQ=59.16;MQRankSum=0.072;QD=17.54;ReadPosRankSum=1.41;SOR=0.987	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:28,29:57:10,15:18,14:99:1007,0,912
-20	10103828	.	T	A	1145.60	.	AC=1;AF=0.500;AN=2;AS_QD=17.36;BaseQRankSum=-1.371e+00;DP=66;ExcessHet=3.0103;FS=0.942;MLEAC=1;MLEAF=0.500;MQ=58.50;MQRankSum=0.447;QD=17.36;ReadPosRankSum=0.584;SOR=0.489	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:33,33:66:16,19:17,14:99:1153,0,1178
-20	10103849	.	T	C	1396.60	.	AC=1;AF=0.500;AN=2;AS_QD=20.85;BaseQRankSum=-3.639e+00;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.81;MQRankSum=0.107;QD=20.84;ReadPosRankSum=-1.630e-01;SOR=0.720	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:32,35:67:15,21:17,14:99:0|1:10103849_T_C:1404,0,1261:10103849
-20	10103850	.	G	A	1396.60	.	AC=1;AF=0.500;AN=2;AS_QD=20.25;BaseQRankSum=3.60;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.50;MQRankSum=0.575;QD=20.24;ReadPosRankSum=-2.040e-01;SOR=0.724	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:33,36:69:15,21:18,15:99:0|1:10103849_T_C:1404,0,1261:10103849
-20	10104018	.	C	T	1203.60	.	AC=1;AF=0.500;AN=2;AS_QD=16.49;BaseQRankSum=1.72;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.78;MQRankSum=-4.660e-01;QD=16.49;ReadPosRankSum=-1.353e+00;SOR=0.760	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:37,36:73:16,15:21,21:99:1211,0,1190
-20	10104352	.	A	G	1558.60	.	AC=1;AF=0.500;AN=2;AS_QD=19.01;BaseQRankSum=-2.423e+00;DP=82;ExcessHet=3.0103;FS=2.942;MLEAC=1;MLEAF=0.500;MQ=59.15;MQRankSum=0.213;QD=19.01;ReadPosRankSum=-9.300e-01;SOR=0.425	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:36,46:82:19,24:17,22:99:1566,0,1206
-20	10104593	.	G	C	780.60	.	AC=1;AF=0.500;AN=2;AS_QD=12.20;BaseQRankSum=-1.238e+00;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.53;MQRankSum=-6.900e-01;QD=12.20;ReadPosRankSum=-6.200e-02;SOR=0.784	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:38,26:64:17,11:21,15:99:788,0,1312
-20	10104648	.	AG	A	822.60	.	AC=1;AF=0.500;AN=2;AS_QD=14.19;BaseQRankSum=-1.408e+00;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.46;MQRankSum=-4.800e-01;QD=14.18;ReadPosRankSum=-1.030e+00;SOR=0.804	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:31,27:58:20,10:11,17:99:830,0,986
-20	10104694	.	T	G	1266.60	.	AC=1;AF=0.500;AN=2;AS_QD=19.20;BaseQRankSum=0.554;DP=66;ExcessHet=3.0103;FS=3.646;MLEAC=1;MLEAF=0.500;MQ=59.86;MQRankSum=0.022;QD=19.19;ReadPosRankSum=0.187;SOR=0.307	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:30,36:66:21,17:9,19:99:1274,0,1021
-20	10105066	.	GA	G	935.60	.	AC=1;AF=0.500;AN=2;AS_QD=20.35;BaseQRankSum=-1.804e+00;DP=47;ExcessHet=3.0103;FS=8.562;MLEAC=1;MLEAF=0.500;MQ=60.69;MQRankSum=1.37;QD=20.34;ReadPosRankSum=0.231;SOR=1.072	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:22,24:46:10,13:12,11:99:0|1:10105066_GA_G:943,0,1125:10105066
-20	10105077	.	G	A	908.60	.	AC=1;AF=0.500;AN=2;AS_QD=20.66;BaseQRankSum=3.50;DP=44;ExcessHet=3.0103;FS=6.222;MLEAC=1;MLEAF=0.500;MQ=59.93;MQRankSum=-5.380e-01;QD=20.65;ReadPosRankSum=-1.290e-01;SOR=0.377	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:21,23:44:9,12:12,11:99:0|1:10105066_GA_G:916,0,1104:10105066
-20	10105095	.	A	T	782.60	.	AC=1;AF=0.500;AN=2;AS_QD=18.21;BaseQRankSum=1.94;DP=43;ExcessHet=3.0103;FS=15.611;MLEAC=1;MLEAF=0.500;MQ=59.93;MQRankSum=-5.240e-01;QD=18.20;ReadPosRankSum=-9.760e-01;SOR=0.056	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:20,23:43:8,13:12,10:99:790,0,607
-20	10105234	.	A	T	1018.60	.	AC=1;AF=0.500;AN=2;AS_QD=15.92;BaseQRankSum=-2.782e+00;DP=64;ExcessHet=3.0103;FS=0.958;MLEAC=1;MLEAF=0.500;MQ=59.71;MQRankSum=-1.000e+00;QD=15.92;ReadPosRankSum=0.350;SOR=0.492	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:33,31:64:15,16:18,15:99:1026,0,1174
-20	10105358	.	A	G	1089.60	.	AC=1;AF=0.500;AN=2;AS_QD=15.35;BaseQRankSum=-5.423e+00;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.59;MQRankSum=-1.345e+00;QD=15.35;ReadPosRankSum=1.00;SOR=0.720	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:34,37:71:14,19:20,18:99:1097,0,1195
-20	10106404	.	T	C	794.60	.	AC=1;AF=0.500;AN=2;AS_QD=12.62;BaseQRankSum=0.805;DP=63;ExcessHet=3.0103;FS=0.996;MLEAC=1;MLEAF=0.500;MQ=59.63;MQRankSum=0.817;QD=12.61;ReadPosRankSum=0.602;SOR=0.478	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:39,24:63:18,15:21,9:99:802,0,1376
-20	10106429	.	C	A	1127.60	.	AC=1;AF=0.500;AN=2;AS_QD=15.04;BaseQRankSum=1.98;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.13;MQRankSum=0.470;QD=15.03;ReadPosRankSum=-2.593e+00;SOR=0.665	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:41,34:75:17,19:24,15:99:1135,0,1364
-20	10106802	.	G	A	1410.60	.	AC=1;AF=0.500;AN=2;AS_QD=17.86;BaseQRankSum=2.69;DP=79;ExcessHet=3.0103;FS=2.988;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.00;QD=17.86;ReadPosRankSum=0.599;SOR=0.794	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:39,40:79:19,19:20,21:99:1418,0,1293
-20	10106858	.	C	G	964.60	.	AC=1;AF=0.500;AN=2;AS_QD=14.19;BaseQRankSum=1.75;DP=68;ExcessHet=3.0103;FS=2.037;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.00;QD=14.19;ReadPosRankSum=-7.600e-01;SOR=0.670	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:38,30:68:21,11:17,19:99:972,0,1186
-20	10106889	.	C	T	767.60	.	AC=1;AF=0.500;AN=2;AS_QD=14.77;BaseQRankSum=0.503;DP=52;ExcessHet=3.0103;FS=1.077;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.00;QD=14.76;ReadPosRankSum=-1.365e+00;SOR=0.456	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:27,25:52:14,9:13,16:99:775,0,867
-20	10107047	.	AG	A	1578.60	.	AC=1;AF=0.500;AN=2;AS_QD=19.74;BaseQRankSum=-2.520e+00;DP=80;ExcessHet=3.0103;FS=5.740;MLEAC=1;MLEAF=0.500;MQ=59.98;MQRankSum=0.585;QD=19.73;ReadPosRankSum=1.41;SOR=0.311	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:39,41:80:22,22:17,19:99:0|1:10107047_AG_A:1586,0,2896:10107047
-20	10107052	.	C	T	1545.60	.	AC=1;AF=0.500;AN=2;AS_QD=19.57;BaseQRankSum=2.88;DP=79;ExcessHet=3.0103;FS=5.883;MLEAC=1;MLEAF=0.500;MQ=59.71;MQRankSum=-9.620e-01;QD=19.56;ReadPosRankSum=1.84;SOR=0.287	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:39,40:79:22,22:17,18:99:0|1:10107047_AG_A:1553,0,2899:10107047
-20	10107331	.	G	GTT	782.64	.	AC=1;AF=0.500;AN=2;AS_QD=13.34;BaseQRankSum=0.909;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.67;MQRankSum=1.71;QD=19.09;ReadPosRankSum=-1.351e+00;SOR=0.628	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:18,23:46:6,13:12,10:99:790,0,498
-20	10107686	.	C	T	1522.60	.	AC=1;AF=0.500;AN=2;AS_QD=20.04;BaseQRankSum=3.49;DP=76;ExcessHet=3.0103;FS=6.354;MLEAC=1;MLEAF=0.500;MQ=59.09;MQRankSum=0.889;QD=20.03;ReadPosRankSum=0.600;SOR=1.448	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:32,44:76:16,24:16,20:99:1530,0,991
-20	10108754	.	T	G	1589.60	.	AC=1;AF=0.500;AN=2;AS_QD=17.28;BaseQRankSum=-1.126e+00;DP=92;ExcessHet=3.0103;FS=3.943;MLEAC=1;MLEAF=0.500;MQ=59.75;MQRankSum=-9.780e-01;QD=17.28;ReadPosRankSum=0.086;SOR=1.032	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:46,46:92:29,21:17,25:99:1597,0,1631
-20	10108866	.	C	T	1173.60	.	AC=1;AF=0.500;AN=2;AS_QD=15.65;BaseQRankSum=1.39;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.69;MQRankSum=0.962;QD=15.65;ReadPosRankSum=-1.590e-01;SOR=0.606	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:40,35:75:24,21:16,14:99:1181,0,1372
-20	10108941	.	T	C	871.60	.	AC=1;AF=0.500;AN=2;AS_QD=14.30;BaseQRankSum=-1.858e+00;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.01;MQRankSum=-1.831e+00;QD=14.29;ReadPosRankSum=-1.554e+00;SOR=0.772	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:32,29:61:20,21:12,8:99:879,0,1035
-20	10109709	.	C	G	999.60	.	AC=1;AF=0.500;AN=2;AS_QD=15.63;BaseQRankSum=-2.326e+00;DP=65;ExcessHet=3.0103;FS=2.069;MLEAC=1;MLEAF=0.500;MQ=59.65;MQRankSum=-1.000e+00;QD=15.62;ReadPosRankSum=-4.570e-01;SOR=0.985	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:33,31:64:20,14:13,17:99:1007,0,1159
-20	10110726	.	GT	G	1000.60	.	AC=1;AF=0.500;AN=2;AS_QD=14.94;BaseQRankSum=2.39;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.58;MQRankSum=-5.100e-01;QD=14.93;ReadPosRankSum=0.095;SOR=0.653	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:30,37:67:13,20:17,17:99:1008,0,777
-20	10111346	.	A	G	1046.60	.	AC=1;AF=0.500;AN=2;AS_QD=14.75;BaseQRankSum=-1.217e+00;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.51;MQRankSum=-6.130e-01;QD=14.74;ReadPosRankSum=-9.300e-02;SOR=0.787	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:39,32:71:19,19:20,13:99:1054,0,1378
-20	10111701	.	C	A	1469.60	.	AC=1;AF=0.500;AN=2;AS_QD=19.86;BaseQRankSum=-4.380e-01;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.00;QD=19.86;ReadPosRankSum=0.400;SOR=0.793	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:36,38:74:20,19:16,19:99:0|1:10111701_C_A:1477,0,2752:10111701
-20	10111705	.	T	A	1464.60	.	AC=1;AF=0.500;AN=2;AS_QD=19.80;BaseQRankSum=-3.171e+00;DP=74;ExcessHet=3.0103;FS=1.888;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.00;QD=19.79;ReadPosRankSum=1.28;SOR=0.935	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:38,36:74:22,18:16,18:99:0|1:10111701_C_A:1472,0,2785:10111701
-20	10111919	.	A	G	1760.60	.	AC=1;AF=0.500;AN=2;AS_QD=17.61;BaseQRankSum=0.726;DP=100;ExcessHet=3.0103;FS=6.421;MLEAC=1;MLEAF=0.500;MQ=59.21;MQRankSum=-9.350e-01;QD=17.61;ReadPosRankSum=-2.210e-01;SOR=0.313	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:48,52:100:26,24:22,28:99:1768,0,1600
-20	10112391	.	G	T	657.60	.	AC=1;AF=0.500;AN=2;AS_QD=13.16;BaseQRankSum=-1.673e+00;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.54;MQRankSum=0.927;QD=13.15;ReadPosRankSum=-8.510e-01;SOR=0.658	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:28,22:50:10,10:18,12:99:665,0,931
-20	10112869	.	T	C	534.60	.	AC=1;AF=0.500;AN=2;AS_QD=12.44;BaseQRankSum=-4.218e+00;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.13;MQRankSum=-1.340e-01;QD=12.43;ReadPosRankSum=-5.870e-01;SOR=0.636	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:24,19:43:17,10:7,9:99:542,0,832
-20	10113407	.	T	G	83.60	.	AC=1;AF=0.500;AN=2;AS_QD=1.68;BaseQRankSum=-3.768e+00;DP=50;ExcessHet=3.0103;FS=61.081;MLEAC=1;MLEAF=0.500;MQ=59.54;MQRankSum=-1.950e+00;QD=1.67;ReadPosRankSum=0.837;SOR=4.796	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:40,10:50:19,5:21,5:91:91,0,1396
-20	10113421	.	G	A	650.60	.	AC=1;AF=0.500;AN=2;AS_QD=16.28;BaseQRankSum=3.05;DP=40;ExcessHet=3.0103;FS=1.618;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.00;QD=16.27;ReadPosRankSum=0.569;SOR=0.374	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:21,19:40:9,9:12,10:99:658,0,661
-20	10113638	.	G	C	1279.60	.	AC=1;AF=0.500;AN=2;AS_QD=17.78;BaseQRankSum=-1.215e+00;DP=72;ExcessHet=3.0103;FS=3.240;MLEAC=1;MLEAF=0.500;MQ=59.36;MQRankSum=0.099;QD=17.77;ReadPosRankSum=-4.500e-02;SOR=1.171	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:34,38:72:17,20:17,18:99:1287,0,1132
-20	10114045	.	T	A	1322.60	.	AC=1;AF=0.500;AN=2;AS_QD=15.75;BaseQRankSum=-2.767e+00;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.28;MQRankSum=-6.260e-01;QD=15.75;ReadPosRankSum=-4.920e-01;SOR=0.610	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:43,41:84:28,22:15,19:99:1330,0,1490
-20	10114705	.	CA	C	527.60	.	AC=1;AF=0.500;AN=2;AS_QD=8.12;BaseQRankSum=1.68;DP=79;ExcessHet=3.0103;FS=4.915;MLEAC=1;MLEAF=0.500;MQ=59.08;MQRankSum=1.17;QD=8.12;ReadPosRankSum=-2.720e-01;SOR=1.382	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:38,27:68:15,13:23,14:99:535,0,870
-20	10115097	.	C	G	1216.60	.	AC=1;AF=0.500;AN=2;AS_QD=16.23;BaseQRankSum=-1.500e-01;DP=75;ExcessHet=3.0103;FS=4.468;MLEAC=1;MLEAF=0.500;MQ=59.19;MQRankSum=1.70;QD=16.22;ReadPosRankSum=-2.970e-01;SOR=0.969	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:39,36:75:14,19:25,17:99:1224,0,1348
-20	10115325	.	C	T	1181.60	.	AC=1;AF=0.500;AN=2;AS_QD=15.55;BaseQRankSum=0.897;DP=76;ExcessHet=3.0103;FS=0.876;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.00;QD=15.55;ReadPosRankSum=1.57;SOR=0.541	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:41,35:76:17,13:24,22:99:1189,0,1426
-20	10115599	.	C	A	931.60	.	AC=1;AF=0.500;AN=2;AS_QD=15.03;BaseQRankSum=1.49;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.63;MQRankSum=-1.070e+00;QD=15.03;ReadPosRankSum=-2.081e+00;SOR=0.608	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:34,28:62:15,16:19,12:99:939,0,1209
-20	10119749	.	G	A	1169.60	.	AC=1;AF=0.500;AN=2;AS_QD=12.58;BaseQRankSum=4.55;DP=93;ExcessHet=3.0103;FS=0.802;MLEAC=1;MLEAF=0.500;MQ=59.75;MQRankSum=-1.236e+00;QD=12.58;ReadPosRankSum=-1.211e+00;SOR=0.538	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:57,36:93:28,22:29,14:99:1177,0,1818
-20	10120207	.	C	CAGGCCACAA	1372.64	.	AC=1;AF=0.500;AN=2;AS_QD=23.27;BaseQRankSum=-8.740e-01;DP=60;ExcessHet=3.0103;FS=3.570;MLEAC=1;MLEAF=0.500;MQ=46.14;MQRankSum=-7.607e+00;QD=23.27;ReadPosRankSum=-3.350e-01;SOR=1.069	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:27,32:59:16,18:11,14:99:1380,0,2579
-20	10120854	.	G	T	1433.60	.	AC=1;AF=0.500;AN=2;AS_QD=19.92;BaseQRankSum=5.79;DP=72;ExcessHet=3.0103;FS=0.919;MLEAC=1;MLEAF=0.500;MQ=59.48;MQRankSum=1.57;QD=19.91;ReadPosRankSum=-1.810e-01;SOR=0.528	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:33,39:72:24,23:9,16:99:1441,0,924
-20	10121178	.	C	T	988.60	.	AC=1;AF=0.500;AN=2;AS_QD=14.33;BaseQRankSum=-7.600e-01;DP=69;ExcessHet=3.0103;FS=8.368;MLEAC=1;MLEAF=0.500;MQ=59.12;MQRankSum=0.393;QD=14.33;ReadPosRankSum=-1.364e+00;SOR=1.317	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:38,31:69:20,19:18,12:99:996,0,1321
-20	10121202	.	C	A	1225.60	.	AC=1;AF=0.500;AN=2;AS_QD=14.26;BaseQRankSum=0.438;DP=87;ExcessHet=3.0103;FS=2.854;MLEAC=1;MLEAF=0.500;MQ=59.04;MQRankSum=-2.740e-01;QD=14.25;ReadPosRankSum=-1.130e-01;SOR=1.040	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:48,38:86:22,21:26,17:99:1233,0,1707
-20	10121272	.	G	A	1350.60	.	AC=1;AF=0.500;AN=2;AS_QD=15.53;BaseQRankSum=-8.770e-01;DP=87;ExcessHet=3.0103;FS=0.810;MLEAC=1;MLEAF=0.500;MQ=59.30;MQRankSum=1.67;QD=15.52;ReadPosRankSum=-1.361e+00;SOR=0.855	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:46,41:87:22,23:24,18:99:1358,0,1588
-20	10121684	.	C	T	1840.60	.	AC=1;AF=0.500;AN=2;AS_QD=20.23;BaseQRankSum=2.63;DP=91;ExcessHet=3.0103;FS=1.716;MLEAC=1;MLEAF=0.500;MQ=59.75;MQRankSum=-8.440e-01;QD=20.23;ReadPosRankSum=0.072;SOR=0.516	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:39,52:91:21,34:18,18:99:1848,0,1246
-20	10122275	.	A	G	1119.60	.	AC=1;AF=0.500;AN=2;AS_QD=13.33;BaseQRankSum=-3.010e-01;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.78;MQRankSum=-1.188e+00;QD=13.33;ReadPosRankSum=-9.620e-01;SOR=0.720	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:50,34:84:21,19:29,15:99:1127,0,1719
-20	10122669	.	G	T	788.60	.	AC=1;AF=0.500;AN=2;AS_QD=15.78;BaseQRankSum=0.387;DP=50;ExcessHet=3.0103;FS=13.281;MLEAC=1;MLEAF=0.500;MQ=57.35;MQRankSum=0.571;QD=15.77;ReadPosRankSum=0.010;SOR=1.869	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:28,22:50:10,12:18,10:99:0|1:10122669_G_T:796,0,1976:10122669
-20	10122672	.	A	G	788.60	.	AC=1;AF=0.500;AN=2;AS_QD=16.10;BaseQRankSum=-2.591e+00;DP=49;ExcessHet=3.0103;FS=13.703;MLEAC=1;MLEAF=0.500;MQ=57.29;MQRankSum=0.618;QD=16.09;ReadPosRankSum=-4.330e-01;SOR=1.856	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:27,22:49:10,12:17,10:99:0|1:10122669_G_T:796,0,1976:10122669
-20	10124075	.	G	C	1073.60	.	AC=1;AF=0.500;AN=2;AS_QD=17.05;BaseQRankSum=-1.210e-01;DP=63;ExcessHet=3.0103;FS=5.014;MLEAC=1;MLEAF=0.500;MQ=59.63;MQRankSum=1.05;QD=17.04;ReadPosRankSum=0.763;SOR=1.251	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:31,32:63:17,15:14,17:99:1081,0,1032
-20	10124267	.	C	T	1488.60	.	AC=1;AF=0.500;AN=2;AS_QD=18.61;BaseQRankSum=6.11;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.00;QD=18.61;ReadPosRankSum=-1.640e-01;SOR=0.675	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:38,42:80:15,27:23,15:99:1496,0,1121
-20	10126398	.	T	A	1653.60	.	AC=1;AF=0.500;AN=2;AS_QD=19.01;BaseQRankSum=1.81;DP=87;ExcessHet=3.0103;FS=4.161;MLEAC=1;MLEAF=0.500;MQ=59.79;MQRankSum=1.13;QD=19.01;ReadPosRankSum=0.418;SOR=1.228	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:39,48:87:23,20:16,28:99:1661,0,1257
-20	10128634	.	T	G	1200.60	.	AC=1;AF=0.500;AN=2;AS_QD=13.05;BaseQRankSum=-6.603e+00;DP=92;ExcessHet=3.0103;FS=1.802;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.00;QD=13.05;ReadPosRankSum=-2.229e+00;SOR=0.922	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:53,39:92:25,18:28,21:99:1208,0,1966
-20	10128652	.	T	C	4007.03	.	AC=2;AF=1.00;AN=2;AS_QD=28.73;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.97;SOR=1.634	GT:AD:DP:F1R2:F2R1:GQ:PL	1/1:0,98:98:0,50:0,48:99:4021,294,0
-20	10129396	.	A	G	1202.60	.	AC=1;AF=0.500;AN=2;AS_QD=16.04;BaseQRankSum=0.140;DP=75;ExcessHet=3.0103;FS=7.765;MLEAC=1;MLEAF=0.500;MQ=59.75;MQRankSum=0.962;QD=16.03;ReadPosRankSum=0.616;SOR=0.246	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:40,35:75:21,20:19,15:99:1210,0,1385
-20	10129600	.	A	G	3446.03	.	AC=2;AF=1.00;AN=2;AS_QD=27.24;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.52;QD=28.20;SOR=0.756	GT:AD:DP:F1R2:F2R1:GQ:PL	1/1:0,97:97:0,48:0,49:99:3460,290,0
-20	10130017	.	G	A	3993.03	.	AC=2;AF=1.00;AN=2;AS_QD=25.00;DP=99;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.66;QD=29.56;SOR=1.090	GT:AD:DP:F1R2:F2R1:GQ:PL	1/1:0,99:99:0,41:0,58:99:4007,298,0
-20	10130249	.	AACAC	A,AAC	1176.06	.	AC=1,1;AF=0.500,0.500;AN=2;AS_QD=23.33,23.30;BaseQRankSum=-5.500e-01;DP=58;ExcessHet=3.0103;FS=3.448;MLEAC=1,1;MLEAF=0.500,0.500;MQ=53.64;MQRankSum=-7.350e-01;QD=30.16;ReadPosRankSum=0.573;SOR=2.242	GT:AD:DP:F1R2:F2R1:GQ:PL	1/2:2,19,18:39:1,10,5:1,9,13:99:1193,476,600,529,0,487
-20	10130306	.	A	ATG	1161.64	.	AC=1;AF=0.500;AN=2;AS_QD=16.37;BaseQRankSum=-1.517e+00;DP=81;ExcessHet=3.0103;FS=1.153;MLEAC=1;MLEAF=0.500;MQ=52.97;MQRankSum=-5.080e+00;QD=16.36;ReadPosRankSum=1.88;SOR=0.448	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:35,36:71:15,17:20,19:99:1169,0,1122
-20	10130345	.	G	GTA	806.64	.	AC=1;AF=0.500;AN=2;AS_QD=13.68;BaseQRankSum=1.26;DP=76;ExcessHet=3.0103;FS=2.286;MLEAC=1;MLEAF=0.500;MQ=55.28;MQRankSum=-3.443e+00;QD=13.67;ReadPosRankSum=-5.300e-01;SOR=0.425	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:34,25:59:13,11:21,14:99:814,0,1126
-20	10130722	.	G	A	1376.60	.	AC=1;AF=0.500;AN=2;AS_QD=18.61;BaseQRankSum=2.72;DP=74;ExcessHet=3.0103;FS=7.888;MLEAC=1;MLEAF=0.500;MQ=56.28;MQRankSum=-6.340e-01;QD=18.60;ReadPosRankSum=1.24;SOR=0.936	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:37,37:74:18,20:19,17:99:0|1:10130722_G_A:1384,0,2356:10130722
-20	10130767	.	ATGTATG	A	1192.60	.	AC=1;AF=0.500;AN=2;AS_QD=22.09;BaseQRankSum=0.049;DP=54;ExcessHet=3.0103;FS=15.567;MLEAC=1;MLEAF=0.500;MQ=53.57;MQRankSum=-1.693e+00;QD=22.09;ReadPosRankSum=-1.232e+00;SOR=1.559	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:25,29:54:11,16:14,13:99:0|1:10130722_G_A:1200,0,2326:10130722
-20	10131196	.	T	C	1681.03	.	AC=2;AF=1.00;AN=2;AS_QD=30.62;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.80;QD=28.17;SOR=0.784	GT:AD:DP:F1R2:F2R1:GQ:PL	1/1:0,44:44:0,31:0,13:99:1695,132,0
-20	10131980	.	T	C	2757.03	.	AC=2;AF=1.00;AN=2;AS_QD=26.80;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.62;QD=26.00;SOR=0.723	GT:AD:DP:F1R2:F2R1:GQ:PL	1/1:0,67:67:0,38:0,29:99:2771,202,0
-20	10131998	.	G	A	1263.60	.	AC=1;AF=0.500;AN=2;AS_QD=21.07;BaseQRankSum=1.46;DP=60;ExcessHet=3.0103;FS=3.609;MLEAC=1;MLEAF=0.500;MQ=56.93;MQRankSum=2.67;QD=21.06;ReadPosRankSum=-5.210e-01;SOR=1.138	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:27,33:60:13,18:14,15:99:0|1:10131998_G_A:1271,0,961:10131998
-20	10132023	.	T	C	1098.60	.	AC=1;AF=0.500;AN=2;AS_QD=19.28;BaseQRankSum=-4.374e+00;DP=57;ExcessHet=3.0103;FS=7.216;MLEAC=1;MLEAF=0.500;MQ=57.11;MQRankSum=2.27;QD=19.27;ReadPosRankSum=1.64;SOR=1.609	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:26,31:57:14,12:12,19:99:0|1:10131998_G_A:1106,0,988:10131998
-20	10132091	.	A	G	897.60	.	AC=1;AF=0.500;AN=2;AS_QD=15.22;BaseQRankSum=-2.570e+00;DP=59;ExcessHet=3.0103;FS=3.570;MLEAC=1;MLEAF=0.500;MQ=58.50;MQRankSum=0.856;QD=15.21;ReadPosRankSum=-2.510e-01;SOR=0.493	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:32,27:59:16,11:16,16:99:905,0,1141
-20	10132301	.	GACACACACAC	G	882.60	.	AC=1;AF=0.500;AN=2;AS_QD=18.79;BaseQRankSum=0.935;DP=55;ExcessHet=3.0103;FS=4.144;MLEAC=1;MLEAF=0.500;MQ=52.35;MQRankSum=-3.895e+00;QD=18.78;ReadPosRankSum=-1.147e+00;SOR=0.447	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:24,23:47:14,10:10,13:99:0|1:10132301_GACACACACAC_G:890,0,2908:10132301
-20	10132340	.	A	G	1173.60	.	AC=1;AF=0.500;AN=2;AS_QD=19.90;BaseQRankSum=-1.502e+00;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.14;MQRankSum=-2.590e+00;QD=19.89;ReadPosRankSum=-1.386e+00;SOR=0.607	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:27,32:59:15,16:12,16:99:0|1:10132301_GACACACACAC_G:1181,0,2715:10132301
-20	10132706	.	G	GAC	227.64	.	AC=1;AF=0.500;AN=2;AS_QD=7.35;BaseQRankSum=-8.110e-01;DP=41;ExcessHet=3.0103;FS=3.846;MLEAC=1;MLEAF=0.500;MQ=48.13;MQRankSum=-3.590e+00;QD=7.34;ReadPosRankSum=2.03;SOR=0.991	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:23,8:31:9,3:14,5:99:0|1:10132706_G_GAC:235,0,922:10132706
-20	10132707	.	T	A	227.60	.	AC=1;AF=0.500;AN=2;AS_QD=7.35;BaseQRankSum=-6.860e-01;DP=43;ExcessHet=3.0103;FS=3.846;MLEAC=1;MLEAF=0.500;MQ=47.41;MQRankSum=-3.590e+00;QD=7.34;ReadPosRankSum=2.03;SOR=0.991	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:23,8:31:9,3:14,5:99:0|1:10132706_G_GAC:235,0,922:10132706
-20	10132709	.	T	A	227.60	.	AC=1;AF=0.500;AN=2;AS_QD=7.35;BaseQRankSum=0.438;DP=43;ExcessHet=3.0103;FS=3.846;MLEAC=1;MLEAF=0.500;MQ=47.41;MQRankSum=-3.590e+00;QD=7.34;ReadPosRankSum=1.51;SOR=0.991	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:23,8:31:9,3:14,5:99:0|1:10132706_G_GAC:235,0,922:10132706
-20	10132711	.	T	A	227.60	.	AC=1;AF=0.500;AN=2;AS_QD=7.60;BaseQRankSum=0.729;DP=42;ExcessHet=3.0103;FS=6.163;MLEAC=1;MLEAF=0.500;MQ=47.07;MQRankSum=-3.540e+00;QD=7.59;ReadPosRankSum=1.36;SOR=0.959	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:22,8:30:9,3:13,5:99:0|1:10132706_G_GAC:235,0,922:10132706
-20	10132713	.	T	A	230.60	.	AC=1;AF=0.500;AN=2;AS_QD=8.25;BaseQRankSum=1.38;DP=40;ExcessHet=3.0103;FS=6.994;MLEAC=1;MLEAF=0.500;MQ=47.07;MQRankSum=-3.624e+00;QD=8.24;ReadPosRankSum=0.586;SOR=0.903	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:20,8:28:8,3:12,5:99:0|1:10132706_G_GAC:238,0,880:10132706
-20	10132715	.	T	A	236.60	.	AC=1;AF=0.500;AN=2;AS_QD=8.78;BaseQRankSum=-2.160e-01;DP=39;ExcessHet=3.0103;FS=6.852;MLEAC=1;MLEAF=0.500;MQ=46.69;MQRankSum=-3.574e+00;QD=8.76;ReadPosRankSum=-1.070e-01;SOR=0.916	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:19,8:27:7,3:12,5:99:0|1:10132706_G_GAC:244,0,795:10132706
-20	10132717	.	T	A	239.60	.	AC=1;AF=0.500;AN=2;AS_QD=8.89;BaseQRankSum=0.514;DP=40;ExcessHet=3.0103;FS=6.852;MLEAC=1;MLEAF=0.500;MQ=47.07;MQRankSum=-3.574e+00;QD=8.87;ReadPosRankSum=-4.790e-01;SOR=0.916	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:19,8:27:7,3:12,5:99:0|1:10132706_G_GAC:247,0,753:10132706
-20	10132719	.	T	A	239.60	.	AC=1;AF=0.500;AN=2;AS_QD=8.89;BaseQRankSum=0.162;DP=41;ExcessHet=3.0103;FS=6.852;MLEAC=1;MLEAF=0.500;MQ=47.42;MQRankSum=-3.574e+00;QD=8.87;ReadPosRankSum=-9.310e-01;SOR=0.916	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:19,8:27:7,3:12,5:99:0|1:10132706_G_GAC:247,0,753:10132706
-20	10132722	.	CAG	C,GAG	927.06	.	AC=1,1;AF=0.500,0.500;AN=2;AS_QD=29.36,30.02;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1,1;MLEAF=0.500,0.500;MQ=47.76;QD=31.98;SOR=1.179	GT:AD:DP:F1R2:F2R1:GQ:PL	1/2:0,14,8:23:0,7,3:0,7,5:99:944,561,580,421,0,728
-20	10134410	.	AAAAGAAAG	A,AAAAG	1155.06	.	AC=1,1;AF=0.500,0.500;AN=2;AS_QD=27.51,29.11;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=1,1;MLEAF=0.500,0.500;MQ=57.03;QD=28.08;SOR=1.942	GT:AD:DP:F1R2:F2R1:GQ:PL	1/2:0,19,10:29:0,11,3:0,8,7:99:1172,402,585,755,0,717
-20	10134479	.	A	C	1434.60	.	AC=1;AF=0.500;AN=2;AS_QD=19.39;BaseQRankSum=-2.606e+00;DP=74;ExcessHet=3.0103;FS=1.117;MLEAC=1;MLEAF=0.500;MQ=56.91;MQRankSum=-1.727e+00;QD=19.39;ReadPosRankSum=-1.972e+00;SOR=1.015	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:35,39:74:15,23:20,16:99:1442,0,1222
-20	10144244	.	C	CA	195.10	.	AC=1;AF=0.500;AN=2;AS_QD=9.13;BaseQRankSum=0.565;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.80;MQRankSum=-7.840e-01;QD=13.01;ReadPosRankSum=0.738;SOR=0.804	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:8,7:28:1,2:7,5:99:174,0,175
-20	10144274	.	G	A	337.60	.	AC=1;AF=0.500;AN=2;AS_QD=4.07;BaseQRankSum=-3.550e+00;DP=85;ExcessHet=3.0103;FS=61.285;MLEAC=1;MLEAF=0.500;MQ=52.47;MQRankSum=-6.514e+00;QD=4.07;ReadPosRankSum=3.31;SOR=5.782	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:66,17:83:37,6:29,11:99:0|1:10144274_G_A:345,0,2682:10144274
-20	10144279	.	G	A	293.60	.	AC=1;AF=0.500;AN=2;AS_QD=3.46;BaseQRankSum=-3.262e+00;DP=87;ExcessHet=3.0103;FS=51.800;MLEAC=1;MLEAF=0.500;MQ=53.13;MQRankSum=-6.476e+00;QD=3.45;ReadPosRankSum=3.77;SOR=5.668	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:69,16:85:38,5:31,11:99:0|1:10144274_G_A:301,0,2862:10144274
-20	10144284	.	C	A	467.60	.	AC=1;AF=0.500;AN=2;AS_QD=5.71;BaseQRankSum=-4.430e+00;DP=82;ExcessHet=3.0103;FS=61.606;MLEAC=1;MLEAF=0.500;MQ=55.32;MQRankSum=-5.163e+00;QD=5.70;ReadPosRankSum=4.64;SOR=5.890	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:64,18:82:33,6:31,12:99:475,0,2009
+20	10100468	.	T	C	897.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.297e+00;DP=64;ExcessHet=3.0103;FS=3.431;MLEAC=1;MLEAF=0.500;MQ=58.38;MQRankSum=-7.060e-01;QD=14.03;ReadPosRankSum=-7.850e-01;SOR=1.179	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:36,28:64:16,10:20,18:99:905,0,1299
+20	10100539	.	CTTCTAG	C	1374.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=0.988;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.76;MQRankSum=-5.036e+00;QD=18.58;ReadPosRankSum=-3.220e-01;SOR=0.709	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:38,36:74:21,16:17,20:99:1382,0,1739
+20	10100845	.	G	C	1144.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=0.628;DP=75;ExcessHet=3.0103;FS=1.900;MLEAC=1;MLEAF=0.500;MQ=55.61;MQRankSum=-3.789e+00;QD=15.26;ReadPosRankSum=-9.230e-01;SOR=0.889	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:39,36:75:23,17:16,19:99:1152,0,1353
+20	10101268	.	TAA	T	890.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=1.44;DP=70;ExcessHet=3.0103;FS=0.990;MLEAC=1;MLEAF=0.500;MQ=59.05;MQRankSum=-1.830e-01;QD=14.60;ReadPosRankSum=1.56;SOR=0.870	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:35,26:61:16,11:19,15:99:898,0,1254
+20	10101288	.	A	G	1006.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-8.580e-01;DP=68;ExcessHet=3.0103;FS=2.070;MLEAC=1;MLEAF=0.500;MQ=58.42;MQRankSum=-1.619e+00;QD=14.80;ReadPosRankSum=-1.793e+00;SOR=1.040	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:37,31:68:16,12:21,19:99:1014,0,1275
+20	10101674	.	TTGTG	T,TTGTGTGTGTG	1464.10	.	AC=1,1;AF=0.500,0.500;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1,1;MLEAF=0.500,0.500;MQ=55.43;QD=25.36;SOR=1.002	GT:AD:DP:F1R2:F2R1:GQ:PL	1/2:0,22,6:35:0,13,3:0,9,3:99:1481,557,581,932,0,925
+20	10101880	.	A	G	1599.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.644e+00;DP=83;ExcessHet=3.0103;FS=1.801;MLEAC=1;MLEAF=0.500;MQ=59.44;MQRankSum=-1.228e+00;QD=19.27;ReadPosRankSum=-1.650e+00;SOR=0.736	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:36,47:83:17,30:19,17:99:1607,0,1223
+20	10101912	.	C	T	1588.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=2.45;DP=85;ExcessHet=3.0103;FS=0.811;MLEAC=1;MLEAF=0.500;MQ=58.91;MQRankSum=-1.863e+00;QD=18.69;ReadPosRankSum=-1.024e+00;SOR=0.604	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:39,46:85:20,25:19,21:99:1596,0,1309
+20	10102234	.	C	T	1259.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.191e+00;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.87;MQRankSum=-2.028e+00;QD=22.90;ReadPosRankSum=0.442;SOR=0.711	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:24,31:55:10,17:14,14:99:0|1:10102234_C_T:1267,0,2599:10102234
+20	10102247	.	G	A	1299.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=1.34;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.87;MQRankSum=-2.028e+00;QD=23.63;ReadPosRankSum=1.32;SOR=0.711	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:24,31:55:9,16:15,15:99:0|1:10102234_C_T:1307,0,2634:10102234
+20	10102248	.	T	C	1299.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-7.830e-01;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.95;MQRankSum=-1.962e+00;QD=22.80;ReadPosRankSum=0.938;SOR=0.784	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:24,33:57:9,16:15,17:99:0|1:10102234_C_T:1307,0,2634:10102234
+20	10102363	.	A	T	1235.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.120e-01;DP=69;ExcessHet=3.0103;FS=2.050;MLEAC=1;MLEAF=0.500;MQ=59.46;MQRankSum=-1.384e+00;QD=17.91;ReadPosRankSum=0.018;SOR=0.438	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:34,35:69:18,19:16,16:99:1243,0,1226
+20	10102530	.	C	T	717.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=0.212;DP=38;ExcessHet=3.0103;FS=1.463;MLEAC=1;MLEAF=0.500;MQ=59.39;MQRankSum=-9.470e-01;QD=18.88;ReadPosRankSum=0.614;SOR=0.330	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:19,19:38:11,12:8,7:99:0|1:10102530_C_T:725,0,1412:10102530
+20	10102531	.	A	G	717.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.540e+00;DP=36;ExcessHet=3.0103;FS=1.480;MLEAC=1;MLEAF=0.500;MQ=59.36;MQRankSum=-9.440e-01;QD=19.93;ReadPosRankSum=0.554;SOR=0.324	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:18,18:36:10,11:8,7:99:0|1:10102530_C_T:725,0,1412:10102530
+20	10102727	.	G	T	1162.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=5.66;DP=68;ExcessHet=3.0103;FS=2.067;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.00;QD=17.10;ReadPosRankSum=1.30;SOR=0.996	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:35,33:68:18,13:17,20:99:1170,0,1022
+20	10102904	.	C	A	1925.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=2.12;DP=100;ExcessHet=3.0103;FS=1.625;MLEAC=1;MLEAF=0.500;MQ=59.35;MQRankSum=-1.571e+00;QD=19.26;ReadPosRankSum=-3.120e-01;SOR=0.698	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:45,55:100:21,26:24,29:99:1933,0,1459
+20	10103110	.	G	C	1604.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.641e+00;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.99;MQRankSum=-6.930e-01;QD=20.31;ReadPosRankSum=0.283;SOR=0.627	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:33,46:79:19,26:14,20:99:1612,0,1136
+20	10103301	.	C	T	932.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=1.79;DP=70;ExcessHet=3.0103;FS=0.917;MLEAC=1;MLEAF=0.500;MQ=59.67;MQRankSum=-9.050e-01;QD=13.32;ReadPosRankSum=-6.660e-01;SOR=0.562	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:42,28:70:16,12:26,16:99:940,0,1468
+20	10103320	.	G	C	842.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=4.67;DP=61;ExcessHet=3.0103;FS=0.984;MLEAC=1;MLEAF=0.500;MQ=59.62;MQRankSum=-8.610e-01;QD=13.81;ReadPosRankSum=0.675;SOR=0.678	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:36,25:61:10,12:26,13:99:850,0,1147
+20	10103333	.	G	A	936.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=1.31;DP=58;ExcessHet=3.0103;FS=7.270;MLEAC=1;MLEAF=0.500;MQ=59.76;MQRankSum=-1.504e+00;QD=16.15;ReadPosRankSum=-1.480e-01;SOR=0.888	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:31,27:58:10,14:21,13:99:944,0,1116
+20	10103552	.	T	G	1165.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.534e+00;DP=75;ExcessHet=3.0103;FS=9.987;MLEAC=1;MLEAF=0.500;MQ=59.10;MQRankSum=-2.379e+00;QD=15.54;ReadPosRankSum=0.992;SOR=1.723	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:39,36:75:17,25:22,11:99:1173,0,1349
+20	10103680	.	G	T	1373.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=0.730;DP=79;ExcessHet=3.0103;FS=1.838;MLEAC=1;MLEAF=0.500;MQ=58.64;MQRankSum=-7.690e-01;QD=17.39;ReadPosRankSum=-9.220e-01;SOR=0.864	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:39,40:79:17,25:22,15:99:1381,0,1262
+20	10103751	.	G	T	999.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=3.02;DP=57;ExcessHet=3.0103;FS=3.657;MLEAC=1;MLEAF=0.500;MQ=59.16;MQRankSum=0.072;QD=17.54;ReadPosRankSum=1.41;SOR=0.987	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:28,29:57:10,15:18,14:99:1007,0,912
+20	10103828	.	T	A	1145.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.371e+00;DP=66;ExcessHet=3.0103;FS=0.942;MLEAC=1;MLEAF=0.500;MQ=58.50;MQRankSum=0.447;QD=17.36;ReadPosRankSum=0.584;SOR=0.489	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:33,33:66:16,19:17,14:99:1153,0,1178
+20	10103849	.	T	C	1396.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-3.639e+00;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.81;MQRankSum=0.107;QD=20.84;ReadPosRankSum=-1.630e-01;SOR=0.720	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:32,35:67:15,21:17,14:99:0|1:10103849_T_C:1404,0,1261:10103849
+20	10103850	.	G	A	1396.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=3.60;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.50;MQRankSum=0.575;QD=20.24;ReadPosRankSum=-2.040e-01;SOR=0.724	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:33,36:69:15,21:18,15:99:0|1:10103849_T_C:1404,0,1261:10103849
+20	10104018	.	C	T	1203.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=1.72;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.78;MQRankSum=-4.660e-01;QD=16.49;ReadPosRankSum=-1.353e+00;SOR=0.760	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:37,36:73:16,15:21,21:99:1211,0,1190
+20	10104352	.	A	G	1558.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.423e+00;DP=82;ExcessHet=3.0103;FS=2.942;MLEAC=1;MLEAF=0.500;MQ=59.15;MQRankSum=0.213;QD=19.01;ReadPosRankSum=-9.300e-01;SOR=0.425	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:36,46:82:19,24:17,22:99:1566,0,1206
+20	10104593	.	G	C	780.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.238e+00;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.53;MQRankSum=-6.900e-01;QD=12.20;ReadPosRankSum=-6.200e-02;SOR=0.784	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:38,26:64:17,11:21,15:99:788,0,1312
+20	10104648	.	AG	A	822.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.408e+00;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.46;MQRankSum=-4.800e-01;QD=14.18;ReadPosRankSum=-1.030e+00;SOR=0.804	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:31,27:58:20,10:11,17:99:830,0,986
+20	10104694	.	T	G	1266.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=0.554;DP=66;ExcessHet=3.0103;FS=3.646;MLEAC=1;MLEAF=0.500;MQ=59.86;MQRankSum=0.022;QD=19.19;ReadPosRankSum=0.187;SOR=0.307	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:30,36:66:21,17:9,19:99:1274,0,1021
+20	10105066	.	GA	G	935.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.804e+00;DP=47;ExcessHet=3.0103;FS=8.562;MLEAC=1;MLEAF=0.500;MQ=60.69;MQRankSum=1.37;QD=20.34;ReadPosRankSum=0.231;SOR=1.072	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:22,24:46:10,13:12,11:99:0|1:10105066_GA_G:943,0,1125:10105066
+20	10105077	.	G	A	908.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=3.50;DP=44;ExcessHet=3.0103;FS=6.222;MLEAC=1;MLEAF=0.500;MQ=59.93;MQRankSum=-5.380e-01;QD=20.65;ReadPosRankSum=-1.290e-01;SOR=0.377	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:21,23:44:9,12:12,11:99:0|1:10105066_GA_G:916,0,1104:10105066
+20	10105095	.	A	T	782.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=1.94;DP=43;ExcessHet=3.0103;FS=15.611;MLEAC=1;MLEAF=0.500;MQ=59.93;MQRankSum=-5.240e-01;QD=18.20;ReadPosRankSum=-9.760e-01;SOR=0.056	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:20,23:43:8,13:12,10:99:790,0,607
+20	10105234	.	A	T	1018.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.782e+00;DP=64;ExcessHet=3.0103;FS=0.958;MLEAC=1;MLEAF=0.500;MQ=59.71;MQRankSum=-1.000e+00;QD=15.92;ReadPosRankSum=0.350;SOR=0.492	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:33,31:64:15,16:18,15:99:1026,0,1174
+20	10105358	.	A	G	1089.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-5.423e+00;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.59;MQRankSum=-1.345e+00;QD=15.35;ReadPosRankSum=1.00;SOR=0.720	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:34,37:71:14,19:20,18:99:1097,0,1195
+20	10106404	.	T	C	794.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=0.805;DP=63;ExcessHet=3.0103;FS=0.996;MLEAC=1;MLEAF=0.500;MQ=59.63;MQRankSum=0.817;QD=12.61;ReadPosRankSum=0.602;SOR=0.478	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:39,24:63:18,15:21,9:99:802,0,1376
+20	10106429	.	C	A	1127.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=1.98;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.13;MQRankSum=0.470;QD=15.03;ReadPosRankSum=-2.593e+00;SOR=0.665	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:41,34:75:17,19:24,15:99:1135,0,1364
+20	10106802	.	G	A	1410.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=2.69;DP=79;ExcessHet=3.0103;FS=2.988;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.00;QD=17.86;ReadPosRankSum=0.599;SOR=0.794	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:39,40:79:19,19:20,21:99:1418,0,1293
+20	10106858	.	C	G	964.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=1.75;DP=68;ExcessHet=3.0103;FS=2.037;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.00;QD=14.19;ReadPosRankSum=-7.600e-01;SOR=0.670	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:38,30:68:21,11:17,19:99:972,0,1186
+20	10106889	.	C	T	767.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=0.503;DP=52;ExcessHet=3.0103;FS=1.077;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.00;QD=14.76;ReadPosRankSum=-1.365e+00;SOR=0.456	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:27,25:52:14,9:13,16:99:775,0,867
+20	10107047	.	AG	A	1578.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.520e+00;DP=80;ExcessHet=3.0103;FS=5.740;MLEAC=1;MLEAF=0.500;MQ=59.98;MQRankSum=0.585;QD=19.73;ReadPosRankSum=1.41;SOR=0.311	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:39,41:80:22,22:17,19:99:0|1:10107047_AG_A:1586,0,2896:10107047
+20	10107052	.	C	T	1545.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=2.88;DP=79;ExcessHet=3.0103;FS=5.883;MLEAC=1;MLEAF=0.500;MQ=59.71;MQRankSum=-9.620e-01;QD=19.56;ReadPosRankSum=1.84;SOR=0.287	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:39,40:79:22,22:17,18:99:0|1:10107047_AG_A:1553,0,2899:10107047
+20	10107331	.	G	GTT	782.64	.	AC=1;AF=0.500;AN=2;BaseQRankSum=0.909;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.67;MQRankSum=1.71;QD=19.09;ReadPosRankSum=-1.351e+00;SOR=0.628	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:18,23:46:6,13:12,10:99:790,0,498
+20	10107686	.	C	T	1522.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=3.49;DP=76;ExcessHet=3.0103;FS=6.354;MLEAC=1;MLEAF=0.500;MQ=59.09;MQRankSum=0.889;QD=20.03;ReadPosRankSum=0.600;SOR=1.448	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:32,44:76:16,24:16,20:99:1530,0,991
+20	10108754	.	T	G	1589.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.126e+00;DP=92;ExcessHet=3.0103;FS=3.943;MLEAC=1;MLEAF=0.500;MQ=59.75;MQRankSum=-9.780e-01;QD=17.28;ReadPosRankSum=0.086;SOR=1.032	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:46,46:92:29,21:17,25:99:1597,0,1631
+20	10108866	.	C	T	1173.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=1.39;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.69;MQRankSum=0.962;QD=15.65;ReadPosRankSum=-1.590e-01;SOR=0.606	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:40,35:75:24,21:16,14:99:1181,0,1372
+20	10108941	.	T	C	871.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.858e+00;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.01;MQRankSum=-1.831e+00;QD=14.29;ReadPosRankSum=-1.554e+00;SOR=0.772	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:32,29:61:20,21:12,8:99:879,0,1035
+20	10109709	.	C	G	999.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.326e+00;DP=65;ExcessHet=3.0103;FS=2.069;MLEAC=1;MLEAF=0.500;MQ=59.65;MQRankSum=-1.000e+00;QD=15.62;ReadPosRankSum=-4.570e-01;SOR=0.985	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:33,31:64:20,14:13,17:99:1007,0,1159
+20	10110726	.	GT	G	1000.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=2.39;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.58;MQRankSum=-5.100e-01;QD=14.93;ReadPosRankSum=0.095;SOR=0.653	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:30,37:67:13,20:17,17:99:1008,0,777
+20	10111346	.	A	G	1046.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.217e+00;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.51;MQRankSum=-6.130e-01;QD=14.74;ReadPosRankSum=-9.300e-02;SOR=0.787	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:39,32:71:19,19:20,13:99:1054,0,1378
+20	10111701	.	C	A	1469.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-4.380e-01;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.00;QD=19.86;ReadPosRankSum=0.400;SOR=0.793	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:36,38:74:20,19:16,19:99:0|1:10111701_C_A:1477,0,2752:10111701
+20	10111705	.	T	A	1464.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-3.171e+00;DP=74;ExcessHet=3.0103;FS=1.888;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.00;QD=19.79;ReadPosRankSum=1.28;SOR=0.935	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:38,36:74:22,18:16,18:99:0|1:10111701_C_A:1472,0,2785:10111701
+20	10111919	.	A	G	1760.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=0.726;DP=100;ExcessHet=3.0103;FS=6.421;MLEAC=1;MLEAF=0.500;MQ=59.21;MQRankSum=-9.350e-01;QD=17.61;ReadPosRankSum=-2.210e-01;SOR=0.313	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:48,52:100:26,24:22,28:99:1768,0,1600
+20	10112391	.	G	T	657.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.673e+00;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.54;MQRankSum=0.927;QD=13.15;ReadPosRankSum=-8.510e-01;SOR=0.658	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:28,22:50:10,10:18,12:99:665,0,931
+20	10112869	.	T	C	534.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-4.218e+00;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.13;MQRankSum=-1.340e-01;QD=12.43;ReadPosRankSum=-5.870e-01;SOR=0.636	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:24,19:43:17,10:7,9:99:542,0,832
+20	10113407	.	T	G	83.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-3.768e+00;DP=50;ExcessHet=3.0103;FS=61.081;MLEAC=1;MLEAF=0.500;MQ=59.54;MQRankSum=-1.950e+00;QD=1.67;ReadPosRankSum=0.837;SOR=4.796	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:40,10:50:19,5:21,5:91:91,0,1396
+20	10113421	.	G	A	650.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=3.05;DP=40;ExcessHet=3.0103;FS=1.618;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.00;QD=16.27;ReadPosRankSum=0.569;SOR=0.374	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:21,19:40:9,9:12,10:99:658,0,661
+20	10113638	.	G	C	1279.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.215e+00;DP=72;ExcessHet=3.0103;FS=3.240;MLEAC=1;MLEAF=0.500;MQ=59.36;MQRankSum=0.099;QD=17.77;ReadPosRankSum=-4.500e-02;SOR=1.171	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:34,38:72:17,20:17,18:99:1287,0,1132
+20	10114045	.	T	A	1322.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.767e+00;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.28;MQRankSum=-6.260e-01;QD=15.75;ReadPosRankSum=-4.920e-01;SOR=0.610	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:43,41:84:28,22:15,19:99:1330,0,1490
+20	10114705	.	CA	C	527.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=1.68;DP=79;ExcessHet=3.0103;FS=4.915;MLEAC=1;MLEAF=0.500;MQ=59.08;MQRankSum=1.17;QD=8.12;ReadPosRankSum=-2.720e-01;SOR=1.382	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:38,27:68:15,13:23,14:99:535,0,870
+20	10115097	.	C	G	1216.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.500e-01;DP=75;ExcessHet=3.0103;FS=4.468;MLEAC=1;MLEAF=0.500;MQ=59.19;MQRankSum=1.70;QD=16.22;ReadPosRankSum=-2.970e-01;SOR=0.969	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:39,36:75:14,19:25,17:99:1224,0,1348
+20	10115325	.	C	T	1181.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=0.897;DP=76;ExcessHet=3.0103;FS=0.876;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.00;QD=15.55;ReadPosRankSum=1.57;SOR=0.541	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:41,35:76:17,13:24,22:99:1189,0,1426
+20	10115599	.	C	A	931.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=1.49;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.63;MQRankSum=-1.070e+00;QD=15.03;ReadPosRankSum=-2.081e+00;SOR=0.608	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:34,28:62:15,16:19,12:99:939,0,1209
+20	10119749	.	G	A	1169.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=4.55;DP=93;ExcessHet=3.0103;FS=0.802;MLEAC=1;MLEAF=0.500;MQ=59.75;MQRankSum=-1.236e+00;QD=12.58;ReadPosRankSum=-1.211e+00;SOR=0.538	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:57,36:93:28,22:29,14:99:1177,0,1818
+20	10120207	.	C	CAGGCCACAA	1372.64	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-8.740e-01;DP=60;ExcessHet=3.0103;FS=3.570;MLEAC=1;MLEAF=0.500;MQ=46.14;MQRankSum=-7.607e+00;QD=23.27;ReadPosRankSum=-3.350e-01;SOR=1.069	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:27,32:59:16,18:11,14:99:1380,0,2579
+20	10120854	.	G	T	1433.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=5.79;DP=72;ExcessHet=3.0103;FS=0.919;MLEAC=1;MLEAF=0.500;MQ=59.48;MQRankSum=1.57;QD=19.91;ReadPosRankSum=-1.810e-01;SOR=0.528	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:33,39:72:24,23:9,16:99:1441,0,924
+20	10121178	.	C	T	988.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-7.600e-01;DP=69;ExcessHet=3.0103;FS=8.368;MLEAC=1;MLEAF=0.500;MQ=59.12;MQRankSum=0.393;QD=14.33;ReadPosRankSum=-1.364e+00;SOR=1.317	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:38,31:69:20,19:18,12:99:996,0,1321
+20	10121202	.	C	A	1225.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=0.438;DP=87;ExcessHet=3.0103;FS=2.854;MLEAC=1;MLEAF=0.500;MQ=59.04;MQRankSum=-2.740e-01;QD=14.25;ReadPosRankSum=-1.130e-01;SOR=1.040	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:48,38:86:22,21:26,17:99:1233,0,1707
+20	10121272	.	G	A	1350.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-8.770e-01;DP=87;ExcessHet=3.0103;FS=0.810;MLEAC=1;MLEAF=0.500;MQ=59.30;MQRankSum=1.67;QD=15.52;ReadPosRankSum=-1.361e+00;SOR=0.855	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:46,41:87:22,23:24,18:99:1358,0,1588
+20	10121684	.	C	T	1840.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=2.63;DP=91;ExcessHet=3.0103;FS=1.716;MLEAC=1;MLEAF=0.500;MQ=59.75;MQRankSum=-8.440e-01;QD=20.23;ReadPosRankSum=0.072;SOR=0.516	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:39,52:91:21,34:18,18:99:1848,0,1246
+20	10122275	.	A	G	1119.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-3.010e-01;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.78;MQRankSum=-1.188e+00;QD=13.33;ReadPosRankSum=-9.620e-01;SOR=0.720	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:50,34:84:21,19:29,15:99:1127,0,1719
+20	10122669	.	G	T	788.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=0.387;DP=50;ExcessHet=3.0103;FS=13.281;MLEAC=1;MLEAF=0.500;MQ=57.35;MQRankSum=0.571;QD=15.77;ReadPosRankSum=0.010;SOR=1.869	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:28,22:50:10,12:18,10:99:0|1:10122669_G_T:796,0,1976:10122669
+20	10122672	.	A	G	788.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.591e+00;DP=49;ExcessHet=3.0103;FS=13.703;MLEAC=1;MLEAF=0.500;MQ=57.29;MQRankSum=0.618;QD=16.09;ReadPosRankSum=-4.330e-01;SOR=1.856	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:27,22:49:10,12:17,10:99:0|1:10122669_G_T:796,0,1976:10122669
+20	10124075	.	G	C	1073.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.210e-01;DP=63;ExcessHet=3.0103;FS=5.014;MLEAC=1;MLEAF=0.500;MQ=59.63;MQRankSum=1.05;QD=17.04;ReadPosRankSum=0.763;SOR=1.251	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:31,32:63:17,15:14,17:99:1081,0,1032
+20	10124267	.	C	T	1488.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=6.11;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.00;QD=18.61;ReadPosRankSum=-1.640e-01;SOR=0.675	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:38,42:80:15,27:23,15:99:1496,0,1121
+20	10126398	.	T	A	1653.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=1.81;DP=87;ExcessHet=3.0103;FS=4.161;MLEAC=1;MLEAF=0.500;MQ=59.79;MQRankSum=1.13;QD=19.01;ReadPosRankSum=0.418;SOR=1.228	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:39,48:87:23,20:16,28:99:1661,0,1257
+20	10128634	.	T	G	1200.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-6.603e+00;DP=92;ExcessHet=3.0103;FS=1.802;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.00;QD=13.05;ReadPosRankSum=-2.229e+00;SOR=0.922	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:53,39:92:25,18:28,21:99:1208,0,1966
+20	10128652	.	T	C	4007.03	.	AC=2;AF=1.00;AN=2;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.73;SOR=1.634	GT:AD:DP:F1R2:F2R1:GQ:PL	1/1:0,98:98:0,50:0,48:99:4021,294,0
+20	10129396	.	A	G	1202.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=0.140;DP=75;ExcessHet=3.0103;FS=7.765;MLEAC=1;MLEAF=0.500;MQ=59.75;MQRankSum=0.962;QD=16.03;ReadPosRankSum=0.616;SOR=0.246	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:40,35:75:21,20:19,15:99:1210,0,1385
+20	10129600	.	A	G	3446.03	.	AC=2;AF=1.00;AN=2;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.52;QD=30.97;SOR=0.756	GT:AD:DP:F1R2:F2R1:GQ:PL	1/1:0,97:97:0,48:0,49:99:3460,290,0
+20	10130017	.	G	A	3993.03	.	AC=2;AF=1.00;AN=2;DP=99;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.66;QD=27.24;SOR=1.090	GT:AD:DP:F1R2:F2R1:GQ:PL	1/1:0,99:99:0,41:0,58:99:4007,298,0
+20	10130249	.	AACAC	A,AAC	1176.06	.	AC=1,1;AF=0.500,0.500;AN=2;BaseQRankSum=-5.500e-01;DP=58;ExcessHet=3.0103;FS=3.448;MLEAC=1,1;MLEAF=0.500,0.500;MQ=53.64;MQRankSum=-7.350e-01;QD=30.16;ReadPosRankSum=0.573;SOR=2.242	GT:AD:DP:F1R2:F2R1:GQ:PL	1/2:2,19,18:39:1,10,5:1,9,13:99:1193,476,600,529,0,487
+20	10130306	.	A	ATG	1161.64	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.517e+00;DP=81;ExcessHet=3.0103;FS=1.153;MLEAC=1;MLEAF=0.500;MQ=52.97;MQRankSum=-5.080e+00;QD=16.36;ReadPosRankSum=1.88;SOR=0.448	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:35,36:71:15,17:20,19:99:1169,0,1122
+20	10130345	.	G	GTA	806.64	.	AC=1;AF=0.500;AN=2;BaseQRankSum=1.26;DP=76;ExcessHet=3.0103;FS=2.286;MLEAC=1;MLEAF=0.500;MQ=55.28;MQRankSum=-3.443e+00;QD=13.67;ReadPosRankSum=-5.300e-01;SOR=0.425	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:34,25:59:13,11:21,14:99:814,0,1126
+20	10130722	.	G	A	1376.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=2.72;DP=74;ExcessHet=3.0103;FS=7.888;MLEAC=1;MLEAF=0.500;MQ=56.28;MQRankSum=-6.340e-01;QD=18.60;ReadPosRankSum=1.24;SOR=0.936	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:37,37:74:18,20:19,17:99:0|1:10130722_G_A:1384,0,2356:10130722
+20	10130767	.	ATGTATG	A	1192.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=0.049;DP=54;ExcessHet=3.0103;FS=15.567;MLEAC=1;MLEAF=0.500;MQ=53.57;MQRankSum=-1.693e+00;QD=22.09;ReadPosRankSum=-1.232e+00;SOR=1.559	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:25,29:54:11,16:14,13:99:0|1:10130722_G_A:1200,0,2326:10130722
+20	10131196	.	T	C	1681.03	.	AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.80;QD=28.20;SOR=0.784	GT:AD:DP:F1R2:F2R1:GQ:PL	1/1:0,44:44:0,31:0,13:99:1695,132,0
+20	10131980	.	T	C	2757.03	.	AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.62;QD=25.00;SOR=0.723	GT:AD:DP:F1R2:F2R1:GQ:PL	1/1:0,67:67:0,38:0,29:99:2771,202,0
+20	10131998	.	G	A	1263.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=1.46;DP=60;ExcessHet=3.0103;FS=3.609;MLEAC=1;MLEAF=0.500;MQ=56.93;MQRankSum=2.67;QD=21.06;ReadPosRankSum=-5.210e-01;SOR=1.138	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:27,33:60:13,18:14,15:99:0|1:10131998_G_A:1271,0,961:10131998
+20	10132023	.	T	C	1098.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-4.374e+00;DP=57;ExcessHet=3.0103;FS=7.216;MLEAC=1;MLEAF=0.500;MQ=57.11;MQRankSum=2.27;QD=19.27;ReadPosRankSum=1.64;SOR=1.609	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:26,31:57:14,12:12,19:99:0|1:10131998_G_A:1106,0,988:10131998
+20	10132091	.	A	G	897.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.570e+00;DP=59;ExcessHet=3.0103;FS=3.570;MLEAC=1;MLEAF=0.500;MQ=58.50;MQRankSum=0.856;QD=15.21;ReadPosRankSum=-2.510e-01;SOR=0.493	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:32,27:59:16,11:16,16:99:905,0,1141
+20	10132301	.	GACACACACAC	G	882.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=0.935;DP=55;ExcessHet=3.0103;FS=4.144;MLEAC=1;MLEAF=0.500;MQ=52.35;MQRankSum=-3.895e+00;QD=18.78;ReadPosRankSum=-1.147e+00;SOR=0.447	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:24,23:47:14,10:10,13:99:0|1:10132301_GACACACACAC_G:890,0,2908:10132301
+20	10132340	.	A	G	1173.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.502e+00;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.14;MQRankSum=-2.590e+00;QD=19.89;ReadPosRankSum=-1.386e+00;SOR=0.607	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:27,32:59:15,16:12,16:99:0|1:10132301_GACACACACAC_G:1181,0,2715:10132301
+20	10132706	.	G	GAC	227.64	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-8.110e-01;DP=41;ExcessHet=3.0103;FS=3.846;MLEAC=1;MLEAF=0.500;MQ=48.13;MQRankSum=-3.590e+00;QD=7.34;ReadPosRankSum=2.03;SOR=0.991	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:23,8:31:9,3:14,5:99:0|1:10132706_G_GAC:235,0,922:10132706
+20	10132707	.	T	A	227.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-6.860e-01;DP=43;ExcessHet=3.0103;FS=3.846;MLEAC=1;MLEAF=0.500;MQ=47.41;MQRankSum=-3.590e+00;QD=7.34;ReadPosRankSum=2.03;SOR=0.991	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:23,8:31:9,3:14,5:99:0|1:10132706_G_GAC:235,0,922:10132706
+20	10132709	.	T	A	227.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=0.438;DP=43;ExcessHet=3.0103;FS=3.846;MLEAC=1;MLEAF=0.500;MQ=47.41;MQRankSum=-3.590e+00;QD=7.34;ReadPosRankSum=1.51;SOR=0.991	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:23,8:31:9,3:14,5:99:0|1:10132706_G_GAC:235,0,922:10132706
+20	10132711	.	T	A	227.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=0.729;DP=42;ExcessHet=3.0103;FS=6.163;MLEAC=1;MLEAF=0.500;MQ=47.07;MQRankSum=-3.540e+00;QD=7.59;ReadPosRankSum=1.36;SOR=0.959	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:22,8:30:9,3:13,5:99:0|1:10132706_G_GAC:235,0,922:10132706
+20	10132713	.	T	A	230.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=1.38;DP=40;ExcessHet=3.0103;FS=6.994;MLEAC=1;MLEAF=0.500;MQ=47.07;MQRankSum=-3.624e+00;QD=8.24;ReadPosRankSum=0.586;SOR=0.903	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:20,8:28:8,3:12,5:99:0|1:10132706_G_GAC:238,0,880:10132706
+20	10132715	.	T	A	236.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.160e-01;DP=39;ExcessHet=3.0103;FS=6.852;MLEAC=1;MLEAF=0.500;MQ=46.69;MQRankSum=-3.574e+00;QD=8.76;ReadPosRankSum=-1.070e-01;SOR=0.916	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:19,8:27:7,3:12,5:99:0|1:10132706_G_GAC:244,0,795:10132706
+20	10132717	.	T	A	239.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=0.514;DP=40;ExcessHet=3.0103;FS=6.852;MLEAC=1;MLEAF=0.500;MQ=47.07;MQRankSum=-3.574e+00;QD=8.87;ReadPosRankSum=-4.790e-01;SOR=0.916	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:19,8:27:7,3:12,5:99:0|1:10132706_G_GAC:247,0,753:10132706
+20	10132719	.	T	A	239.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=0.162;DP=41;ExcessHet=3.0103;FS=6.852;MLEAC=1;MLEAF=0.500;MQ=47.42;MQRankSum=-3.574e+00;QD=8.87;ReadPosRankSum=-9.310e-01;SOR=0.916	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:19,8:27:7,3:12,5:99:0|1:10132706_G_GAC:247,0,753:10132706
+20	10132722	.	CAG	C,GAG	927.06	.	AC=1,1;AF=0.500,0.500;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1,1;MLEAF=0.500,0.500;MQ=47.76;QD=29.56;SOR=1.179	GT:AD:DP:F1R2:F2R1:GQ:PL	1/2:0,14,8:23:0,7,3:0,7,5:99:944,561,580,421,0,728
+20	10134410	.	AAAAGAAAG	A,AAAAG	1155.06	.	AC=1,1;AF=0.500,0.500;AN=2;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=1,1;MLEAF=0.500,0.500;MQ=57.03;QD=30.62;SOR=1.942	GT:AD:DP:F1R2:F2R1:GQ:PL	1/2:0,19,10:29:0,11,3:0,8,7:99:1172,402,585,755,0,717
+20	10134479	.	A	C	1434.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.606e+00;DP=74;ExcessHet=3.0103;FS=1.117;MLEAC=1;MLEAF=0.500;MQ=56.91;MQRankSum=-1.727e+00;QD=19.39;ReadPosRankSum=-1.972e+00;SOR=1.015	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:35,39:74:15,23:20,16:99:1442,0,1222
+20	10144244	.	C	CA	195.10	.	AC=1;AF=0.500;AN=2;BaseQRankSum=0.565;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.80;MQRankSum=-7.840e-01;QD=13.01;ReadPosRankSum=0.738;SOR=0.804	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:8,7:28:1,2:7,5:99:174,0,175
+20	10144274	.	G	A	337.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-3.550e+00;DP=85;ExcessHet=3.0103;FS=61.285;MLEAC=1;MLEAF=0.500;MQ=52.47;MQRankSum=-6.514e+00;QD=4.07;ReadPosRankSum=3.31;SOR=5.782	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:66,17:83:37,6:29,11:99:0|1:10144274_G_A:345,0,2682:10144274
+20	10144279	.	G	A	293.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-3.262e+00;DP=87;ExcessHet=3.0103;FS=51.800;MLEAC=1;MLEAF=0.500;MQ=53.13;MQRankSum=-6.476e+00;QD=3.45;ReadPosRankSum=3.77;SOR=5.668	GT:AD:DP:F1R2:F2R1:GQ:PGT:PID:PL:PS	0|1:69,16:85:38,5:31,11:99:0|1:10144274_G_A:301,0,2862:10144274
+20	10144284	.	C	A	467.60	.	AC=1;AF=0.500;AN=2;BaseQRankSum=-4.430e+00;DP=82;ExcessHet=3.0103;FS=61.606;MLEAC=1;MLEAF=0.500;MQ=55.32;MQRankSum=-5.163e+00;QD=5.70;ReadPosRankSum=4.64;SOR=5.890	GT:AD:DP:F1R2:F2R1:GQ:PL	0/1:64,18:82:33,6:31,12:99:475,0,2009