Fix a couple of bugs

broadinstitute · Oct 21, 2024 · 20062bf · 20062bf
1 parent a4e35f3
commit 20062bf
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diff --git a/scripts/variantstore/wdl/test/GvsQuickstartHailIntegration.wdl b/scripts/variantstore/wdl/test/GvsQuickstartHailIntegration.wdl
@@ -66,7 +66,6 @@ workflow GvsQuickstartHailIntegration {
             git_branch_or_tag = git_branch_or_tag,
             git_hash = git_hash,
             drop_state = "ZERO",
-            use_VETS = use_VETS,
             use_compressed_references = use_compressed_references,
             extract_do_not_filter_override = extract_do_not_filter_override,
             load_vcf_headers = true,
@@ -99,7 +98,6 @@ workflow GvsQuickstartHailIntegration {
             git_branch_or_tag = git_branch_or_tag,
             git_hash = git_hash,
             project_id = project_id,
-            use_VETS = use_VETS,
             dataset_name = GvsQuickstartVcfIntegration.dataset_name,
             filter_set_name = GvsQuickstartVcfIntegration.filter_set_name,
             scatter_width = 10,

diff --git a/scripts/variantstore/wdl/test/GvsQuickstartIntegration.wdl b/scripts/variantstore/wdl/test/GvsQuickstartIntegration.wdl
@@ -83,7 +83,6 @@ workflow GvsQuickstartIntegration {
             input:
                 git_branch_or_tag = git_branch_or_tag,
                 git_hash = GetToolVersions.git_hash,
-                use_VETS = true,
                 extract_do_not_filter_override = false,
                 dataset_suffix = "vets_hail",
                 use_default_dockers = use_default_dockers,