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VS-1490 - Refactor python code from extract dir into a scripts directory. Build and Test GATK 4 #4803: Pull request #9017 synchronize by gbggrant
October 23, 2024 21:38 1h 31m 14s gg_VS-1490_RefactorPython
gg_VS-1490_RefactorPython
October 23, 2024 21:38 1h 31m 14s
Change the kryo version specification to use maven style [,) instead of + Build and Test GATK 4 #4802: Pull request #9018 opened by lbergelson
October 23, 2024 20:52 52m 18s lb_use_maven_style_coord
lb_use_maven_style_coord
October 23, 2024 20:52 52m 18s
VS-1490 - Refactor python code from extract dir into a scripts directory. Build and Test GATK 4 #4801: Pull request #9017 opened by gbggrant
October 23, 2024 20:34 1h 20m 27s gg_VS-1490_RefactorPython
gg_VS-1490_RefactorPython
October 23, 2024 20:34 1h 20m 27s
Create tools for SV VCF cleaning Build and Test GATK 4 #4800: Pull request #8996 synchronize by kjaisingh
October 23, 2024 16:55 51m 32s kj_sv_cleanvcf
kj_sv_cleanvcf
October 23, 2024 16:55 51m 32s
Use jetty bom to enforce uniform jetty versions (#9016) Build and Test GATK 4 #4799: Commit dffedfb pushed by lbergelson
October 23, 2024 15:41 51m 27s master
master
October 23, 2024 15:41 51m 27s
Use jetty bom to enforce uniform jetty versions Build and Test GATK 4 #4798: Pull request #9016 opened by lbergelson
October 23, 2024 14:21 52m 32s lb_jetty_bom
lb_jetty_bom
October 23, 2024 14:21 52m 32s
Added a '--prefer-mane-transcripts' mode that enforces MANE_Select ta… Build and Test GATK 4 #4797: Commit c4860d4 pushed by jonn-smith
October 23, 2024 12:49 52m 42s master
master
October 23, 2024 12:49 52m 42s
Additional Dependency updates (#9006) Build and Test GATK 4 #4796: Commit d056c32 pushed by lbergelson
October 23, 2024 12:34 51m 26s master
master
October 23, 2024 12:34 51m 26s
VS-1476. Removing All usage of VQSR from VDS creation. Build and Test GATK 4 #4795: Pull request #9015 synchronize by gbggrant
October 23, 2024 11:03 1h 28m 32s gg_VS-1476_RemoveVQSRFromVDS
gg_VS-1476_RemoveVQSRFromVDS
October 23, 2024 11:03 1h 28m 32s
VS-1476. Removing All usage of VQSR from VDS creation. Build and Test GATK 4 #4794: Pull request #9015 synchronize by gbggrant
October 22, 2024 20:36 1h 23m 15s gg_VS-1476_RemoveVQSRFromVDS
gg_VS-1476_RemoveVQSRFromVDS
October 22, 2024 20:36 1h 23m 15s
Additional Dependency updates Build and Test GATK 4 #4793: Pull request #9006 synchronize by lbergelson
October 22, 2024 20:20 51m 20s lb_security_fix
lb_security_fix
October 22, 2024 20:20 51m 20s
Create tools for SV VCF cleaning Build and Test GATK 4 #4792: Pull request #8996 synchronize by kjaisingh
October 22, 2024 20:03 52m 8s kj_sv_cleanvcf
kj_sv_cleanvcf
October 22, 2024 20:03 52m 8s
Create tools for SV VCF cleaning Build and Test GATK 4 #4791: Pull request #8996 synchronize by kjaisingh
October 22, 2024 19:48 51m 34s kj_sv_cleanvcf
kj_sv_cleanvcf
October 22, 2024 19:48 51m 34s
Create tools for SV VCF cleaning Build and Test GATK 4 #4790: Pull request #8996 synchronize by kjaisingh
October 22, 2024 19:38 54m 3s kj_sv_cleanvcf
kj_sv_cleanvcf
October 22, 2024 19:38 54m 3s
Added a '--prefer-mane-transcripts' mode that enforces MANE_Select tagged Gencode transcripts where possible Build and Test GATK 4 #4789: Pull request #9012 synchronize by jamesemery
October 22, 2024 17:45 54m 28s je_ManeTranscriptModeFunctotator
je_ManeTranscriptModeFunctotator
October 22, 2024 17:45 54m 28s
Added a '--prefer-mane-transcripts' mode that enforces MANE_Select tagged Gencode transcripts where possible Build and Test GATK 4 #4788: Pull request #9012 synchronize by jamesemery
October 22, 2024 16:05 51m 53s je_ManeTranscriptModeFunctotator
je_ManeTranscriptModeFunctotator
October 22, 2024 16:05 51m 53s
VS-1476. Removing All usage of VQSR from VDS creation. Build and Test GATK 4 #4787: Pull request #9015 synchronize by gbggrant
October 22, 2024 15:45 1h 17m 17s gg_VS-1476_RemoveVQSRFromVDS
gg_VS-1476_RemoveVQSRFromVDS
October 22, 2024 15:45 1h 17m 17s
Additional Dependency updates Build and Test GATK 4 #4786: Pull request #9006 synchronize by lbergelson
October 21, 2024 21:59 50m 59s lb_security_fix
lb_security_fix
October 21, 2024 21:59 50m 59s
Additional Dependency updates Build and Test GATK 4 #4785: Pull request #9006 synchronize by lbergelson
October 21, 2024 21:57 50m 47s lb_security_fix
lb_security_fix
October 21, 2024 21:57 50m 47s
VS-1476. Removing All usage of VQSR from VDS creation. Build and Test GATK 4 #4784: Pull request #9015 synchronize by gbggrant
October 21, 2024 19:19 1h 15m 15s gg_VS-1476_RemoveVQSRFromVDS
gg_VS-1476_RemoveVQSRFromVDS
October 21, 2024 19:19 1h 15m 15s
VS-1476. Removing All usage of VQSR from VDS creation. Build and Test GATK 4 #4783: Pull request #9015 synchronize by gbggrant
October 21, 2024 19:15 1h 19m 25s gg_VS-1476_RemoveVQSRFromVDS
gg_VS-1476_RemoveVQSRFromVDS
October 21, 2024 19:15 1h 19m 25s
VS-1476. Removing All usage of VQSR from VDS creation. Build and Test GATK 4 #4782: Pull request #9015 opened by gbggrant
October 21, 2024 19:11 1h 15m 59s gg_VS-1476_RemoveVQSRFromVDS
gg_VS-1476_RemoveVQSRFromVDS
October 21, 2024 19:11 1h 15m 59s
VS-1506 - Pull changes from EchoCallset into ah_var_store branch Build and Test GATK 4 #4781: Pull request #8993 synchronize by gbggrant
October 19, 2024 01:56 1h 13m 20s gg_VS-1288_PullEchoCallsetChangesIntoAhVarStore
gg_VS-1288_PullEchoCallsetChangesIntoAhVarStore
October 19, 2024 01:56 1h 13m 20s
Create tools for SV VCF cleaning Build and Test GATK 4 #4780: Pull request #8996 synchronize by kjaisingh
October 18, 2024 22:07 51m 40s kj_sv_cleanvcf
kj_sv_cleanvcf
October 18, 2024 22:07 51m 40s
Create tools for SV VCF cleaning Build and Test GATK 4 #4779: Pull request #8996 synchronize by kjaisingh
October 18, 2024 22:07 50m 47s kj_sv_cleanvcf
kj_sv_cleanvcf
October 18, 2024 22:07 50m 47s