From 195f557f336a0e5fe97d3b846bb01794b1541e0e Mon Sep 17 00:00:00 2001 From: Mark Walker Date: Tue, 10 Dec 2024 10:47:39 -0500 Subject: [PATCH] Add scramble docker to single sample template --- .../single_sample/GATKSVPipelineSingleSample.json.tmpl | 1 + 1 file changed, 1 insertion(+) diff --git a/inputs/templates/terra_workspaces/single_sample/GATKSVPipelineSingleSample.json.tmpl b/inputs/templates/terra_workspaces/single_sample/GATKSVPipelineSingleSample.json.tmpl index bf7801298..70bae9352 100644 --- a/inputs/templates/terra_workspaces/single_sample/GATKSVPipelineSingleSample.json.tmpl +++ b/inputs/templates/terra_workspaces/single_sample/GATKSVPipelineSingleSample.json.tmpl @@ -30,6 +30,7 @@ "GATKSVPipelineSingleSample.linux_docker" : "${workspace.linux_docker}", "GATKSVPipelineSingleSample.manta_docker": "${workspace.manta_docker}", + "GATKSVPipelineSingleSample.scramble_docker": "${workspace.scramble_docker}", "GATKSVPipelineSingleSample.sv_base_docker": "${workspace.sv_base_docker}", "GATKSVPipelineSingleSample.sv_base_mini_docker": "${workspace.sv_base_mini_docker}", "GATKSVPipelineSingleSample.sv_pipeline_docker": "${workspace.sv_pipeline_docker}",