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trio inference fix
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@brentp brentp released this 26 Apr 19:17
· 29 commits to master since this release
v0.2.13
df0e63c

v0.2.13

  • add "Heterozygosity rate" as a per-sample metric to the html output. (Thanks Irenaeus and Kelly for the suggestion)
  • fix inference for some cases. obvious parent-child pairs were sometimes missed.

Installation

grab the static binary , or use docker via brentp/somalier:v0.2.13

sites files (unchanged from previous releases)

These sites files are build-specific, but as of this release, once the sites are extracted, the resulting somalier files can be used to compare samples even across genome builds.

sites.hg19.vcf.gz
sites.hg38.nochr.vcf.gz
sites.GRCh37.vcf.gz
sites.hg38.vcf.gz

sites.hg38.rna.vcf.gz only includes sites likely to be expressed in GTeX

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