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snp

About

SNP software to analyze and annotate variant files

Contribute

local-origin-upstream In order to contribute to the developement of the *snp software repository:

  1. Fork the Git repository to your own account:

    1. Go to https://github.com/bredeson/snp
    2. Click the Fork button in the upper-right corner of the browser.
    3. Press the green Create Fork button at the bottom of the Create a new fork page. You will then be sent to your newly-forked GitHub repository.

  2. Clone your newly-forked Git repository to your local machine:

    1. Press the green Code button. You'll be presented with possible cloning path options.
    2. Click the SSH tab.
    3. Copy the path by pressing the overlapping squares icon to the right of the repo URL, or highlight the text and press command + C.
    4. In your Terminal application, type and execute the command below. NOTE: replace <git-path> below the repo URL you copied above.
    git clone <git-path>

  3. Configure your forked and cloned Git repository on your local machine with an upstream remote:

    1. Change directory into the newly-cloned snp repo:
    cd snp
    1. Add the upstream remote to https://github.com/bredeson/snp:
    git remote add upstream https://github.com/bredeson/snp.git

  4. Next, add and commit your changes as you would normally, but don't push your changes yet! First, do:

    git pull upstream main

  5. Now, push your changes to your origin repo:

    git push origin main

  6. Submit a Pull Request:

    1. In your browser, go to your forked Git repository.
    2. Click on the Pull requests tab.
    3. Click the green New pull request button.
    4. Click the green Create pull request button.
    5. Add in sucinct Title and descriptive summary of the changes you made.
    6. Click the green Create pull request button.