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Add an option to use Gillespie algorithm, e.g. to update grid points. Requires:
Then, tau can be calculated based on the sum of probabilities:
let U = Math.random(); let tau = -Math.log(U)/sumprobs;
And a reaction can be sampled proportional to their relative probabilities too.
(example Gillespie I have already worked out outside of Cacatoo: https://jsfiddle.net/bramvandijk88/892nagLm/)
The text was updated successfully, but these errors were encountered:
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Add an option to use Gillespie algorithm, e.g. to update grid points. Requires:
Then, tau can be calculated based on the sum of probabilities:
let U = Math.random();
let tau = -Math.log(U)/sumprobs;
And a reaction can be sampled proportional to their relative probabilities too.
(example Gillespie I have already worked out outside of Cacatoo: https://jsfiddle.net/bramvandijk88/892nagLm/)
The text was updated successfully, but these errors were encountered: