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Richard Domander edited this page Aug 6, 2018 · 38 revisions

Aggregator

Note that this POM is only needed so that Travis can build both Legacy and Modern. It updates only to include the latest versions of these modules.

Legacy

pom-bonej-legacy

5.0.0

  • Updates to bonej-legacy-plugins_:5.0.0
  • Updates to bonej-legacy-util_:5.0.0
  • Drops bonej-legacy-pqct artefact
4.0.0
  • Update to bonej-legacy-plugins 4.0.0
  • Update to bonej-legacy-utils 3.0.0
3.0.0
  • Update to boneJ-legacy-plugins 2.0.0
  • Update to boneJ-legacy-pqct 1.1.0
2.0.0
  • Update to boneJ-legacy-plugins 1.1.0
  • Update to boneJ-legacy-util 2.0.0
1.0.0
  • Update to boneJ-legacy-plugins 1.0.0
  • Update to boneJ-legacy-pqct 1.0.0
  • Update to boneJ-legacy-util 1.0.0

boneJ-legacy-plugins_

4.0.0
  • Artefact renamed to boneJ-legacy-plugins_. It wasn't recognized properly without the underscore.
  • All plugins moved under menu Plugins>BoneJ Legacy>
  • StackCropper deleted
  • EllipsoidFitter deprecated and removed from plugins.config
  • MeasureSurface deprecated and removed from plugins.config
  • NeckShaftAngle deprecated and removed from plugins.config
  • RoiInterpolator deprecated and removed from plugins.config
  • StructureModelIndex deprecated and removed from plugins.config
  • Fixes bugs
  • Removes methods from the API
  • Removes method parameters from the API
  • Makes methods static
3.0.0
  • FractalBoxCounter deleted
  • ISQReader deleted
  • KontronIMGReader deleted
  • VolumeFraction deleted
2.0.0
  • AnalyzeSkeleton deleted
  • Connectivity deprecated and removed from plugins.config
  • FractalBoxCounter deprecated and removed from plugins.config
  • Help deleted
  • ISQReader deprecated and removed from plugins.config
  • KontronIMGReader deprecated and removed from plugins.config
  • MeasureSurface deprecated and removed from plugins.config
  • SkeletonAngles deleted
  • Skeletonise deleted
  • VolumeFraction deprecated and removed from plugins.config
1.1.0
  • LocalThickness deprecated
  • LocalThickness removed from plugins.config
1.0.0
  • AnalyseSkeleton deprecated
  • AnalyseSkeleton removed from plugins.config
  • Skeletonise deprecated
  • Skeletonise removed from plugins.config
  • SkeletonAngles deprecated
  • SkeletonAngles removed from plugins.config
  • Help deprecated
  • Help removed from plugins.config
  • Packages restructured
  • Analyse Skeleton called from the AnalyzeSkeleton plugin
  • Skeletonise called from the Skeletonize3Dplugin
  • Thickness called from the Local Thickness plugin
  • Erode/Dilate called from the VIB plugin

bonej-legacy-pqct

Artefact discontinued. Tools now distributed independently

1.1.0
  • Read_Stratec_File deprecated and removed from plugins.config
1.0.0
  • Packages restructured

bonej-legacy-util

4.0.0
  • Artefact renamed to boneJ-legacy-util_. It wasn't recognized properly without the underscore.
  • Removes deprecation from incorrectly identified code.
3.0.0
  • ArrayHelper deleted
  • EigenCalculator deleted
  • FitCircle deprecated
2.0.1
  • ArrayHelper deprecated
  • EigenCalculator deprecated
2.0.0
  • Move TestDataMaker to package org.bonej.util
  • Fix TestDataMaker.binaryNoise for repeatable tests
1.0.0
  • Packages restructured
  • Rounding bug fixed in Trig.angle3D

Modern

pom-bonej2

0.4.0
  • Update to org.bonej.bonej-ops 0.4.0
  • Update to org.bonej.bonej-utilities 0.4.0
  • Update to org.bonej.bonej-plugins 0.4.0
  • Drops testImgs module as unnecessary
0.3.0
  • Update to org.bonej.ops 0.3.0
  • Update to org.bonej.utilities 0.3.0
  • Update to org.bonej.wrapperPlugins 0.3.0
0.2.0
  • Update to org.bonej.ops 0.2.0
  • Update to org.bonej.utilities 0.2.0
  • Update to org.bonej.wrapperPlugins 0.2.0
0.1.0
  • Update to org.bonej.ops 0.1.0
  • Update to org.bonej.utilities 0.1.0
  • Update to org.bonej.wrapperPlugins 0.1.0

bonej-ops

0.4.0
  • Artefact renamed to bonej-ops
  • Refactors Anisotropy ops - deletes old and adds new
  • Moves "intertrabecular angles" related ops to ita package
  • Hides methods from the API
  • Adds DistanceFromEllipsoidSurface op
  • Changes QuadricToEllipsoid output type
0.3.0
  • Adds Anisotropy ops
0.2.0
  • Adds CleanShortEdges op
  • Adds NPointAngles op
  • Adds VertexValenceSorter op
  • Removes TriplePointAngles op
0.1.0
  • Adds `CentroidLinAlg3d op
  • Adds TriplePointAngles op

org.bonej.testImgs

Module discontinued as unnecessary. All tests for the code should be repeatable with just the modules needed for running BoneJ, thus an extra module that's needed to be downloaded for testing is not great.

0.1.0
  • Adds Cuboid, HollowCuboid and WireFrameCuboid

org.bonej.utilities

0.3.0
  • TBD
0.2.0
  • Adds methods for inspecting image axes and elements
  • Adds methods for inspecting ImagePlus images
  • Adds methods for Graph
  • Adds SharedTable class for showing result data
  • Adds RoiManagerUtil class for cropping ImagePlus based on ROIs
0.1.0
  • Utilities for the first wrapper plugins

org.bonej.wrapperPlugins

0.3.0
  • Adds AnisotropyWrapper
0.2.0
  • Adds ThicknessWrapper
  • Adds IntertrabecularAngleWrapper
  • Adds ConnectivityWrapper
  • Adds WrapperUtils utility class for other wrappers
  • Adds ElementFractionWrapper
  • Adds SurfaceFractionWrapper
  • Adds IsosurfaceWrapper
  • Adds FractalDimensionWrapper
  • Modernise AnalyseSkeletonWrapper and SkeletoniseWrapper
  • Adds utilities for wrappers
  • Adds n-dimensional splitting
  • Adds tools for managing the BoneJ results table
  • Remove TriplePointAnglesWrapper
0.1.0
  • Adds AnalyseSkeletonWrapper
  • Adds Help plugin
  • Adds SkeletoniseWrapper
  • Adds TriplePointAnglesWrapper
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