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Reading/writing MSAs from/to A3M files might be a useful addition to Biotite.
A2M/A3M files are quite commonly accepted as input/produced by alignment programs
or protein structure prediction pipelines (e.g. MMseqs2, RoseTTAFold and AlphaFold3).
The format itself offers additional notation for inserted amino acids.
The text was updated successfully, but these errors were encountered:
JHKru
changed the title
Support for A3M/AM files
Support for A2M/A3M files
Dec 19, 2024
I did not know RoseTTAFold also uses A3M format. I already have some functionality regarding this for private usage, so I will sanitize the code and prepare a PR for this in the upcoming weeks
Reading/writing MSAs from/to A3M files might be a useful addition to Biotite.
A2M/A3M files are quite commonly accepted as input/produced by alignment programs
or protein structure prediction pipelines (e.g. MMseqs2, RoseTTAFold and AlphaFold3).
The format itself offers additional notation for inserted amino acids.
The text was updated successfully, but these errors were encountered: