references.jsonld

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      "description": "AmberTools consists of several independently developed packages that work well by themselves. The suite can also be used to carry out complete molecular dynamics simulations, with either explicit water or generalized Born solvent models.",
      "name": "AmberTools",
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      "citation": "https://pubs.acs.org/doi/10.1021/acs.jcim.3c01153",
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      "description": "Open Babel is a chemical toolbox designed to speak the many languages of chemical data. It's an open, collaborative project allowing anyone to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas.",
      "name": "Open Babel",
      "url": "https://openbabel.org/",
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      "citation": "https://doi.org/10.1186/1758-2946-3-33",
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      "description": "A tool based on Python to use Antechamber to generate topologies for chemical compounds and to interface with others python applications like CCPN tools or ARIA.",
      "name": "ACPYPE",
      "url": "https://code.google.com/archive/p/acpype/",
      "applicationCategory": "Computational Biology tool",
      "citation": "http://www.biomedcentral.com/1756-0500/5/367",
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      "softwareVersion": "2022.7.21"
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