diff --git a/docs/index.md b/docs/index.md index 0c03410..e3d1549 100644 --- a/docs/index.md +++ b/docs/index.md @@ -14,7 +14,7 @@ navigation: 1
-# ![Direct RNA nanopore analysis pipeline](https://raw.githubusercontent.com/biocorecrg/master_of_pores/master/docs/logo_master.jpg) +# ![Direct RNA nanopore analysis pipeline](https://raw.githubusercontent.com/biocorecrg/master_of_pores/v1.1/docs/logo_master.jpg) # Nanopore analysis pipeline v1.5 Nextflow pipeline for analysis of Nanopore data from direct RNA sequencing. This is a joint project between [CRG bioinformatics core](https://biocore.crg.eu/) and [Epitranscriptomics and RNA Dynamics research group](https://www.crg.eu/en/programmes-groups/novoa-lab). diff --git a/docs/nanomod.md b/docs/nanomod.md index 668f910..b986048 100644 --- a/docs/nanomod.md +++ b/docs/nanomod.md @@ -9,7 +9,7 @@ This module allows to predict the loci with RNA modifications starting from data ## Workflow - + * **index_reference** index the reference file for Epinano diff --git a/docs/nanopreprocess.md b/docs/nanopreprocess.md index 7411957..6248afa 100644 --- a/docs/nanopreprocess.md +++ b/docs/nanopreprocess.md @@ -11,7 +11,7 @@ This module takes as input the raw fast5 reads - single or multi - and produces ## Workflow - + | Process name | Description | | ------------- | ------------- | diff --git a/docs/nanotail.md b/docs/nanotail.md index d49f204..0d9d181 100644 --- a/docs/nanotail.md +++ b/docs/nanotail.md @@ -9,7 +9,7 @@ This module allows to estimates polyA sizes by using two different methods (nano # Workflow - + 1. **check_reference** It verifies whether the reference is zipped and eventually unzip it 1. **tailfindr** it runs *tailfindr* tool in parallel.