diff --git a/docs/index.md b/docs/index.md
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@@ -14,7 +14,7 @@ navigation: 1
-# ![Direct RNA nanopore analysis pipeline](https://raw.githubusercontent.com/biocorecrg/master_of_pores/master/docs/logo_master.jpg)
+# ![Direct RNA nanopore analysis pipeline](https://raw.githubusercontent.com/biocorecrg/master_of_pores/v1.1/docs/logo_master.jpg)
# Nanopore analysis pipeline v1.5
Nextflow pipeline for analysis of Nanopore data from direct RNA sequencing. This is a joint project between [CRG bioinformatics core](https://biocore.crg.eu/) and [Epitranscriptomics and RNA Dynamics research group](https://www.crg.eu/en/programmes-groups/novoa-lab).
diff --git a/docs/nanomod.md b/docs/nanomod.md
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@@ -9,7 +9,7 @@ This module allows to predict the loci with RNA modifications starting from data
## Workflow
-
+
* **index_reference** index the reference file for Epinano
diff --git a/docs/nanopreprocess.md b/docs/nanopreprocess.md
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--- a/docs/nanopreprocess.md
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@@ -11,7 +11,7 @@ This module takes as input the raw fast5 reads - single or multi - and produces
## Workflow
-
+
| Process name | Description |
| ------------- | ------------- |
diff --git a/docs/nanotail.md b/docs/nanotail.md
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@@ -9,7 +9,7 @@ This module allows to estimates polyA sizes by using two different methods (nano
# Workflow
-
+
1. **check_reference** It verifies whether the reference is zipped and eventually unzip it
1. **tailfindr** it runs *tailfindr* tool in parallel.