GithubActionTests.yml

name: PR Tests
on: [pull_request]
jobs:
  test-linux:
    name: Linux tests
    runs-on: ubuntu-latest
    strategy:
      matrix:
        py_test_marker:
          - not long_running_1 and not long_running_2
          - long_running_1
          - long_running_2
    steps:
    - uses: actions/checkout@v1
    - name: Setup
      uses: bioconda/bioconda-actions/bioconda_utils_setup_conda/@master
    - name: Install bioconda-utils
      run: |
        python setup.py install
    - name: Build docker container
      run: |
        docker build -t quay.io/bioconda/bioconda-utils-build-env:latest ./
        docker history quay.io/bioconda/bioconda-utils-build-env:latest
        docker run --rm -t quay.io/bioconda/bioconda-utils-build-env:latest sh -lec 'type -t conda && conda info -a && conda list'
        docker build -t quay.io/bioconda/bioconda-utils-test-env:latest -f ./Dockerfile.test ./
    - name: Run tests '${{ matrix.py_test_marker }}'
      run: |
        if git diff --name-only origin/master...HEAD | grep -vE ^docs; then
            py.test --durations=0 test/ -v --log-level=DEBUG --tb=native -m '${{ matrix.py_test_marker }}'
        else
            echo "Skipping pytest - only docs modified"
        fi
  test-macosx:
    name: OSX tests
    runs-on: macOS-latest
    steps:
    - uses: actions/checkout@v1
    - name: Setup
      uses: bioconda/bioconda-actions/bioconda_utils_setup_conda/@master
    - name: Install bioconda-utils
      run: |
        python setup.py install
    - name: Run tests
      run: |
        if git diff --name-only origin/master...HEAD | grep -vE ^docs; then
            py.test --durations=0 test/ -v --log-level=DEBUG -k "not docker" --tb=native
        else
            echo "Skipping pytest - only docs modified"
        fi
  autobump-test:
    name: autobump test
    runs-on: ubuntu-latest
    steps:
    - uses: actions/checkout@v1
    - name: Setup
      uses: bioconda/bioconda-actions/bioconda_utils_setup_conda@master
    - name: Install bioconda-utils
      run: |
        python setup.py install
    - name: Test autobump
      env:
        AUTOBUMP_OPTS: --dry-run
      uses: bioconda/bioconda-actions/bioconda_utils_autobump@master