From ddd24104c840e37b838b85995665b4f86fe51620 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Ant=C3=B4nio=20Camargo?=
 <apcamargo@users.noreply.github.com>
Date: Fri, 18 Oct 2024 15:56:47 -0700
Subject: [PATCH 1/2] Add `pyhmmsearch`

---
 recipes/pyhmmsearch/meta.yaml | 48 +++++++++++++++++++++++++++++++++++
 1 file changed, 48 insertions(+)
 create mode 100644 recipes/pyhmmsearch/meta.yaml

diff --git a/recipes/pyhmmsearch/meta.yaml b/recipes/pyhmmsearch/meta.yaml
new file mode 100644
index 0000000000000..2b9db4f73734c
--- /dev/null
+++ b/recipes/pyhmmsearch/meta.yaml
@@ -0,0 +1,48 @@
+{% set name = "pyhmmsearch" %}
+{% set version = "2024.10.18" %}
+
+package:
+  name: {{ name|lower }}
+  version: {{ version }}
+
+source:
+  url: https://pypi.org/packages/source/{{ name[0] }}/{{ name }}/pyhmmsearch-{{ version }}.tar.gz
+  sha256: 50c150659a45934b5b69a0459038bb1c304612951c67bd046eb72e5102b29692
+
+build:
+  script: {{ PYTHON }} -m pip install . -vvv --no-deps --no-build-isolation --no-cache-dir
+  number: 0
+  noarch: python
+  entry_points:
+    - pyhmmsearch=pyhmmsearch.pyhmmsearch:main
+    - reformat_pyhmmsearch=pyhmmsearch.reformat_pyhmmsearch:main
+    - serialize_hmm_models=pyhmmsearch.serialize_hmm_models:main
+  run_exports:
+    - {{ pin_subpackage("pyhmmsearch", max_pin=None) }}
+
+requirements:
+  host:
+    - python
+    - pip
+  run:
+    - python
+    - pyhmmer >=0.10.12
+    - pandas >=2
+    - tqdm >=4
+
+test:
+  imports:
+    - pyhmmsearch
+  commands:
+    - pyhmmsearch --help
+    - reformat_pyhmmsearch --help
+    - serialize_hmm_models --help
+
+about:
+  home: "https://github.com/new-atlantis-labs/pyhmmsearch-stable"
+  summary: "Fast implementation of HMMSEARCH optimized for high-memory systems using PyHmmer."
+  license: MIT
+  license_family: MIT
+  license_file: LICENSE
+  dev_url: "https://github.com/new-atlantis-labs/pyhmmsearch-stable"
+  doc_url: "https://github.com/new-atlantis-labs/pyhmmsearch-stable/blob/main/README.md"

From f2dc643bbb903286e115f0e285ed9aaa0978dca6 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Ant=C3=B4nio=20Camargo?=
 <apcamargo@users.noreply.github.com>
Date: Mon, 21 Oct 2024 10:48:08 -0700
Subject: [PATCH 2/2] Update meta.yaml

---
 recipes/pyhmmsearch/meta.yaml | 6 ++----
 1 file changed, 2 insertions(+), 4 deletions(-)

diff --git a/recipes/pyhmmsearch/meta.yaml b/recipes/pyhmmsearch/meta.yaml
index 2b9db4f73734c..adffe0a2b168d 100644
--- a/recipes/pyhmmsearch/meta.yaml
+++ b/recipes/pyhmmsearch/meta.yaml
@@ -1,5 +1,5 @@
 {% set name = "pyhmmsearch" %}
-{% set version = "2024.10.18" %}
+{% set version = "2024.10.20" %}
 
 package:
   name: {{ name|lower }}
@@ -7,7 +7,7 @@ package:
 
 source:
   url: https://pypi.org/packages/source/{{ name[0] }}/{{ name }}/pyhmmsearch-{{ version }}.tar.gz
-  sha256: 50c150659a45934b5b69a0459038bb1c304612951c67bd046eb72e5102b29692
+  sha256: fc654467ab29758e43638ea61e2ec6ddc0332f377bd7ce0e334099a0103dfbf9
 
 build:
   script: {{ PYTHON }} -m pip install . -vvv --no-deps --no-build-isolation --no-cache-dir
@@ -31,8 +31,6 @@ requirements:
     - tqdm >=4
 
 test:
-  imports:
-    - pyhmmsearch
   commands:
     - pyhmmsearch --help
     - reformat_pyhmmsearch --help