diff --git a/recipes/illumina-cleanup/build.sh b/recipes/illumina-cleanup/build.sh
new file mode 100644
index 0000000000000..2995ae022f40a
--- /dev/null
+++ b/recipes/illumina-cleanup/build.sh
@@ -0,0 +1,6 @@
+#!/bin/bash
+set -e -x
+mkdir -p $PREFIX/bin
+
+chmod 755 bin/illumina-cleanup
+cp -f bin/illumina-cleanup $PREFIX/bin/illumina-cleanup
diff --git a/recipes/illumina-cleanup/meta.yaml b/recipes/illumina-cleanup/meta.yaml
new file mode 100644
index 0000000000000..2948a4c6e27b2
--- /dev/null
+++ b/recipes/illumina-cleanup/meta.yaml
@@ -0,0 +1,35 @@
+{% set name="illumina-cleanup" %}
+{% set version = "1.0.0" %}
+{% set sha256 = "7835de2339772446fba2f607f72d98252c2de9397953a451f7602a13ffaff848" %}
+
+package:
+  name: {{ name }}
+  version: {{ version }}
+
+source:
+  url: https://github.com/rpetit3/illumina-cleanup/archive/v{{ version }}.tar.gz
+  sha256: {{ sha256 }}
+
+build:
+  number: 0
+
+requirements:
+  run:
+    - bbmap
+    - fastq-scan
+    - fastqc
+    - lighter
+    - nextflow
+    - pigz
+
+test:
+  commands:
+    - illumina-cleanup
+    - illumina-cleanup --help
+    - illumina-cleanup --version
+
+about:
+  home: https://github.com/rpetit3/illumina-cleanup
+  license: MIT
+  license_file: LICENSE
+  summary: Nextflow pipeline for pre-processing Illumina FASTQ files