From c103371e3eacefa11af32526f66792b311fd0450 Mon Sep 17 00:00:00 2001 From: Elmar Pruesse Date: Thu, 29 Nov 2018 21:27:10 -0700 Subject: [PATCH 1/3] Update scnic to 0.6.0 --- recipes/scnic/meta.yaml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/recipes/scnic/meta.yaml b/recipes/scnic/meta.yaml index bccae944ffa3e..51f2e48ad1778 100644 --- a/recipes/scnic/meta.yaml +++ b/recipes/scnic/meta.yaml @@ -1,4 +1,4 @@ -{% set version = "0.5.3" %} +{% set version = "0.6.0" %} package: name: scnic @@ -6,7 +6,7 @@ package: source: url: https://github.com/shafferm/SCNIC/archive/{{ version }}.tar.gz - sha256: a2857f96d9887c74c8380d501c1db1d1620c19daf6a0341da38bad4a9d44c51d + sha256: 476868bb0e1703ee4bd29e712e94178f0027b4413fd9428dcf0922baffd3d677 build: number: 0 From cddaf35869a461eb357399cd4c8fa39227062165 Mon Sep 17 00:00:00 2001 From: Elmar Pruesse Date: Mon, 3 Dec 2018 15:47:52 -0700 Subject: [PATCH 2/3] Work around fastspar insufficient armadillo pin --- recipes/scnic/meta.yaml | 14 ++++++++++++-- 1 file changed, 12 insertions(+), 2 deletions(-) diff --git a/recipes/scnic/meta.yaml b/recipes/scnic/meta.yaml index 51f2e48ad1778..a4a620e9de9af 100644 --- a/recipes/scnic/meta.yaml +++ b/recipes/scnic/meta.yaml @@ -27,15 +27,25 @@ requirements: - biom-format - networkx >2 - scikit-bio - - fastspar - - parallel + - fastspar 0.0.6 + # fastspar does not pin armadillo correctly, doing + # that here until fastspar 0.0.7 fixes it + - armadillo 9.* + - tqdm + - matplotlib + - seaborn test: command: - SCNIC_analysis.py --help + - fastspar --help # verify fastspar working correctly about: home: https://github.com/shafferm/SCNIC license: BSD license_file: LICENSE summary: "SCNIC: Sparse Cooccurence Network Investigation for Compositional data" + +extra: + recipe-maintainers: + - shafferm From 4ed297c71985790d324dab510ca638f2a79c9017 Mon Sep 17 00:00:00 2001 From: Elmar Pruesse Date: Mon, 3 Dec 2018 15:58:33 -0700 Subject: [PATCH 3/3] fix pin --- recipes/scnic/meta.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/recipes/scnic/meta.yaml b/recipes/scnic/meta.yaml index a4a620e9de9af..efd95b37cefe3 100644 --- a/recipes/scnic/meta.yaml +++ b/recipes/scnic/meta.yaml @@ -30,7 +30,7 @@ requirements: - fastspar 0.0.6 # fastspar does not pin armadillo correctly, doing # that here until fastspar 0.0.7 fixes it - - armadillo 9.* + - armadillo 8.* - tqdm - matplotlib - seaborn