From 97f7538e6886b5b65dbba4789952a25b1f342ca8 Mon Sep 17 00:00:00 2001 From: RJMW Date: Tue, 27 Nov 2018 23:15:54 +0000 Subject: [PATCH 1/4] Add dimspy recipes for reference purposes --- recipes/dimspy/1.2.0/build.sh | 3 +++ recipes/dimspy/1.2.0/meta.yaml | 49 ++++++++++++++++++++++++++++++++++ recipes/dimspy/meta.yaml | 14 +++++----- 3 files changed, 59 insertions(+), 7 deletions(-) create mode 100644 recipes/dimspy/1.2.0/build.sh create mode 100644 recipes/dimspy/1.2.0/meta.yaml diff --git a/recipes/dimspy/1.2.0/build.sh b/recipes/dimspy/1.2.0/build.sh new file mode 100644 index 0000000000000..3786386a73c83 --- /dev/null +++ b/recipes/dimspy/1.2.0/build.sh @@ -0,0 +1,3 @@ +#!/bin/bash + +$PYTHON setup.py install --single-version-externally-managed --record=record.txt diff --git a/recipes/dimspy/1.2.0/meta.yaml b/recipes/dimspy/1.2.0/meta.yaml new file mode 100644 index 0000000000000..6a0ff66769a0b --- /dev/null +++ b/recipes/dimspy/1.2.0/meta.yaml @@ -0,0 +1,49 @@ +package: + name: dimspy + version: "1.2.0" + +source: + fn: dimspy-1.2.0.tar.gz + url: https://files.pythonhosted.org/packages/ed/a9/915b082888d0d145af747da12cab7bb26ecfe143ec6bced7aac5dedca0c6/dimspy-1.2.0.tar.gz + md5: b4a31230e9d5fd89a0aca601a9bc672b + +build: + skip: True # [py3k] + number: 1 + entry_points: + - dimspy = dimspy.__main__:main + +requirements: + build: + - python + - setuptools + - numpy + - scipy + - fastcluster + - pymzml <=2.0.0 + - h5py + - pythonnet + run: + - python + - numpy + - scipy + - fastcluster + - pymzml <=2.0.0 + - h5py + - pythonnet + +test: + imports: + - dimspy + - dimspy.models + - dimspy.portals + - dimspy.process + + commands: + - dimspy --help + +about: + home: https://github.com/computational-metabolomics/dimspy + license: GPLv3 + summary: 'Python package for data processing of direct-infusion mass spectrometry-based metabolomics and lipidomics data' + license_family: GPL3 diff --git a/recipes/dimspy/meta.yaml b/recipes/dimspy/meta.yaml index be579897be9c2..e6c358f348b0f 100644 --- a/recipes/dimspy/meta.yaml +++ b/recipes/dimspy/meta.yaml @@ -1,25 +1,25 @@ package: name: dimspy - version: "1.2.0" + version: "1.3.0" source: - url: https://files.pythonhosted.org/packages/ed/a9/915b082888d0d145af747da12cab7bb26ecfe143ec6bced7aac5dedca0c6/dimspy-1.2.0.tar.gz - md5: b4a31230e9d5fd89a0aca601a9bc672b + url: https://files.pythonhosted.org/packages/e0/a5/b2bf1c47bb7f31db1a902d9a435a12d982ef47d8493f3246df21ca87d0f7/dimspy-1.3.0.tar.gz + md5: cd15e9aea8f74a7d08e434c5358a6504 build: skip: True # [py3k] - number: 1 + number: 0 entry_points: - dimspy = dimspy.__main__:main requirements: - host: + build: - python - setuptools - numpy - scipy - fastcluster - - pymzml + - pymzml <=2.0.0 - h5py - pythonnet run: @@ -27,7 +27,7 @@ requirements: - numpy - scipy - fastcluster - - pymzml + - pymzml <=2.0.0 - h5py - pythonnet From 677d6209e95058ae65d15296c801343e0d83dab6 Mon Sep 17 00:00:00 2001 From: RJMW Date: Wed, 28 Nov 2018 01:09:46 +0000 Subject: [PATCH 2/4] Remove filename --- recipes/dimspy/1.2.0/meta.yaml | 1 - 1 file changed, 1 deletion(-) diff --git a/recipes/dimspy/1.2.0/meta.yaml b/recipes/dimspy/1.2.0/meta.yaml index 6a0ff66769a0b..858a71c0277e2 100644 --- a/recipes/dimspy/1.2.0/meta.yaml +++ b/recipes/dimspy/1.2.0/meta.yaml @@ -3,7 +3,6 @@ package: version: "1.2.0" source: - fn: dimspy-1.2.0.tar.gz url: https://files.pythonhosted.org/packages/ed/a9/915b082888d0d145af747da12cab7bb26ecfe143ec6bced7aac5dedca0c6/dimspy-1.2.0.tar.gz md5: b4a31230e9d5fd89a0aca601a9bc672b From 3ea62bf0793c261da219068f7990e916bf6e6e46 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Bj=C3=B6rn=20Gr=C3=BCning?= Date: Wed, 28 Nov 2018 10:58:51 +0100 Subject: [PATCH 3/4] remove from blacklist --- build-fail-blacklist | 1 - 1 file changed, 1 deletion(-) diff --git a/build-fail-blacklist b/build-fail-blacklist index c808e3f74dc1e..c5724a1398d54 100644 --- a/build-fail-blacklist +++ b/build-fail-blacklist @@ -37,7 +37,6 @@ recipes/perl-file-homedir # needs some special treatment, shorter prefix than normal pkgs recipes/dimspy/1.1.0 -recipes/dimspy recipes/dimspy/1.0.0 #can't find file to patch at input line 3 From c294d014ef92548744480f3fcdcc8a79c4d1f773 Mon Sep 17 00:00:00 2001 From: Ralf Weber Date: Wed, 28 Nov 2018 10:12:02 +0000 Subject: [PATCH 4/4] Update build-fail-blacklist --- build-fail-blacklist | 3 +++ 1 file changed, 3 insertions(+) diff --git a/build-fail-blacklist b/build-fail-blacklist index c5724a1398d54..b943bbeea2caf 100644 --- a/build-fail-blacklist +++ b/build-fail-blacklist @@ -36,9 +36,12 @@ recipes/smalt recipes/perl-file-homedir # needs some special treatment, shorter prefix than normal pkgs +recipes/dimspy +recipes/dimspy/1.2.0 recipes/dimspy/1.1.0 recipes/dimspy/1.0.0 + #can't find file to patch at input line 3 recipes/erds