From c248b9803848bb098218c3dc2b4fbbc86e1b4efa Mon Sep 17 00:00:00 2001 From: Bioconda Bot <47040946+BiocondaBot@users.noreply.github.com> Date: Sun, 20 Oct 2024 20:52:02 -0400 Subject: [PATCH] Update fastq-dl to 3.0.0 (#51506) MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit * Update fastq-dl to 3.0.0 * Update `fastq-dl` recipe * Add non-Python dependencies * update depends, exclude depends of depends * add to maintainers * Update meta.yaml --------- Co-authored-by: Antônio Camargo Co-authored-by: Robert A. Petit III --- recipes/fastq-dl/meta.yaml | 24 +++++++++++++++--------- 1 file changed, 15 insertions(+), 9 deletions(-) diff --git a/recipes/fastq-dl/meta.yaml b/recipes/fastq-dl/meta.yaml index 0f276e73c516e..892a52d2045f2 100644 --- a/recipes/fastq-dl/meta.yaml +++ b/recipes/fastq-dl/meta.yaml @@ -1,30 +1,32 @@ -{% set version = "2.0.4" %} +{% set name = "fastq-dl" %} +{% set version = "3.0.0" %} package: - name: fastq-dl + name: {{ name }} version: {{ version }} source: url: https://pypi.io/packages/source/f/fastq_dl/fastq_dl-{{ version }}.tar.gz - sha256: 201a75f7e7b08d1eb56c625c98f92ad39e9e683e1921bb60a24a38a158a2daa8 + sha256: de85e3fcc60c2f2fb9313336df9706add440b0f89963f28a46fa75e5ff041a0a build: number: 0 noarch: python + script: {{ PYTHON }} -m pip install . -vv --no-deps --no-build-isolation entry_points: - - fastq-dl = fastq_dl.fastq_dl:main - script: "{{ PYTHON }} -m pip install . -vv" + - fastq-dl = fastq_dl.cli.download:main + run_exports: + - {{ pin_subpackage(name, max_pin="x.x") }} requirements: host: - - python >=3.7 - - poetry =1.3 + - python >=3.9 + - poetry-core - pip - run: - executor - pigz - - python >=3.7 + - python >=3.9 - pysradb >=1.4 - requests - rich-click >=1.6.0 @@ -43,3 +45,7 @@ about: license: MIT license_file: LICENSE summary: A tool to download FASTQs associated with Study, Experiment, or Run accessions. + +extra: + recipe-maintainers: + - rpetit3