From 9b4e53f3c7d087e8c4cc0a84edd8791253dbd828 Mon Sep 17 00:00:00 2001
From: Christian Roth <christian.roth@mpibpc.mpg.de>
Date: Wed, 17 Oct 2018 07:35:50 +0200
Subject: [PATCH] Fix umi tools (#11376)

 umi_tools: clean up dependencies
---
 recipes/umi_tools/build.sh  |  3 ---
 recipes/umi_tools/meta.yaml | 14 +++++++-------
 2 files changed, 7 insertions(+), 10 deletions(-)
 delete mode 100644 recipes/umi_tools/build.sh

diff --git a/recipes/umi_tools/build.sh b/recipes/umi_tools/build.sh
deleted file mode 100644
index 3786386a73c83..0000000000000
--- a/recipes/umi_tools/build.sh
+++ /dev/null
@@ -1,3 +0,0 @@
-#!/bin/bash
-
-$PYTHON setup.py install --single-version-externally-managed --record=record.txt
diff --git a/recipes/umi_tools/meta.yaml b/recipes/umi_tools/meta.yaml
index 56156bfe265de..02d4ccbb8332b 100644
--- a/recipes/umi_tools/meta.yaml
+++ b/recipes/umi_tools/meta.yaml
@@ -11,20 +11,21 @@ source:
   sha256: {{ sha256hash }}
 
 build:
-  number: 1
+  number: 2
+  script: "{{ PYTHON }} -m pip install . --no-deps --ignore-installed --no-cache-dir -vvv"
+  entry_points:
+    - umi_tools = umi_tools.umi_tools:main
 
 requirements:
   build:
     - {{ compiler('c') }}
   host:
     - python
+    - pip
     - matplotlib
     - scipy
     - regex
-    - freetype
-    - certifi ==2016.9.26
     - setuptools >=1.1
-    - cython >=0.19
     - numpy >=1.7
     - pandas >=0.12.0
     - pysam >=0.8.4
@@ -34,9 +35,6 @@ requirements:
     - matplotlib
     - scipy
     - regex
-    - freetype
-    - certifi ==2016.9.26
-    - cython >=0.19
     - numpy >=1.7
     - pandas >=0.12.0
     - pysam >=0.8.4
@@ -49,5 +47,7 @@ test:
 about:
   home: https://github.com/CGATOxford/UMI-tools
   license: MIT License
+  license_family: MIT
   summary: 'Tools for dealing with Unique Molecular Identifiers
             (UMIs) / Random Molecular Tags (RMTs)'
+  dev_url: https://github.com/CGATOxford/UMI-tools