From 496918db9853935982cc10ac9f1159b411fe1032 Mon Sep 17 00:00:00 2001
From: Jayaram Radhakrishnan <97015642+jayramr@users.noreply.github.com>
Date: Tue, 22 Oct 2024 12:56:51 +0400
Subject: [PATCH] Initial add telosearchlr-v1.0.0 (#51438)

* Initial add telosearchlr-v1.0.0

* build custom telosearchlr-v1.0.0

* build custom telosearchlr-v1.0.0

* build custom telosearchlr-v1.0.0

* build custom telosearchlr-v1.0.0

* build custom telosearchlr-v1.0.0

* build custom telosearchlr-v1.0.1

* build custom telosearchlr-v1.0.1
---
 recipes/telosearchlr/build.sh  | 11 +++++++++++
 recipes/telosearchlr/meta.yaml | 36 ++++++++++++++++++++++++++++++++++
 2 files changed, 47 insertions(+)
 create mode 100644 recipes/telosearchlr/build.sh
 create mode 100644 recipes/telosearchlr/meta.yaml

diff --git a/recipes/telosearchlr/build.sh b/recipes/telosearchlr/build.sh
new file mode 100644
index 0000000000000..20e19710bf486
--- /dev/null
+++ b/recipes/telosearchlr/build.sh
@@ -0,0 +1,11 @@
+#!/bin/bash
+
+mkdir -p ${PREFIX}/bin
+for f in *.py;
+do
+  if ! grep -q "^#!/usr/bin/env python3" "$f"; then
+    sed -i "1i #!/usr/bin/env python3" "$f"
+  fi
+done
+chmod +x *.py
+mv *.py $PREFIX/bin
diff --git a/recipes/telosearchlr/meta.yaml b/recipes/telosearchlr/meta.yaml
new file mode 100644
index 0000000000000..823ff500a6125
--- /dev/null
+++ b/recipes/telosearchlr/meta.yaml
@@ -0,0 +1,36 @@
+{% set name = "TeloSearchLR" %}
+{% set version = "1.0.1" %}
+
+package:
+  name: "{{ name|lower }}"
+  version: "{{ version }}"
+
+source:
+  url: "https://github.com/gchchung/{{ name }}/archive/refs/tags/v{{ version }}.tar.gz"
+  sha256: "1f3750f062af9996aba3d0bf6ec2096e8176e9a6597fb15cb91514d5264d3225"
+
+build:
+  noarch: python
+  number: 0
+  run_exports:
+    - {{ pin_subpackage('telosearchlr', max_pin="x") }}
+
+requirements:
+  host:
+    - python >=3.9
+  run:
+    - python >=3.9
+    - Bio
+    - pillow
+    - svgutils
+    - plotly
+    - tidehunter
+
+test:
+  commands:
+    - TeloSearchLR.py -h
+about:
+  home: "https://github.com/gchchung/TeloSearchLR"
+  license: "Academic and Non-Commercial Research Use"
+  license_file: LICENSE
+  summary: "TeloSearchLR (telomere search using long sequencing reads) is a Python script for aiding the identificaiton of telomeric repeat motifs."