From 294aa2f7c66cd3d9a61ef47999de66199db176b3 Mon Sep 17 00:00:00 2001
From: Chris-Lowe-Integrity
 <43525473+Chris-Lowe-Integrity@users.noreply.github.com>
Date: Sat, 20 Oct 2018 04:05:48 -0400
Subject: [PATCH] r-gpca (#11428)

* r-gpca

* r-gpca recipe

* Update meta.yaml

* Removed All Comments
---
 recipes/r-gpca/build.sh  | 11 +++++++++
 recipes/r-gpca/meta.yaml | 48 ++++++++++++++++++++++++++++++++++++++++
 2 files changed, 59 insertions(+)
 create mode 100644 recipes/r-gpca/build.sh
 create mode 100644 recipes/r-gpca/meta.yaml

diff --git a/recipes/r-gpca/build.sh b/recipes/r-gpca/build.sh
new file mode 100644
index 0000000000000..aeaad348da1d2
--- /dev/null
+++ b/recipes/r-gpca/build.sh
@@ -0,0 +1,11 @@
+#!/bin/bash
+
+if [[ $target_platform =~ linux.* ]] || [[ $target_platform == win-32 ]] || [[ $target_platform == win-64 ]] || [[ $target_platform == osx-64 ]]; then
+  export DISABLE_AUTOBREW=1
+  mv DESCRIPTION DESCRIPTION.old
+  grep -v '^Priority: ' DESCRIPTION.old > DESCRIPTION
+  $R CMD INSTALL --build .
+else
+  mkdir -p $PREFIX/lib/R/library/gPCA
+  mv * $PREFIX/lib/R/library/gPCA
+fi
diff --git a/recipes/r-gpca/meta.yaml b/recipes/r-gpca/meta.yaml
new file mode 100644
index 0000000000000..4f1052c026a31
--- /dev/null
+++ b/recipes/r-gpca/meta.yaml
@@ -0,0 +1,48 @@
+{% set version = '1.0' %}
+
+{% set posix = 'm2-' if win else '' %}
+{% set native = 'm2w64-' if win else '' %}
+
+package:
+  name: r-gpca
+  version: {{ version|replace("-", "_") }}
+
+source:
+  url:
+    - {{ cran_mirror }}/src/contrib/gPCA_{{ version }}.tar.gz
+    - {{ cran_mirror }}/src/contrib/Archive/gPCA/gPCA_{{ version }}.tar.gz
+  sha256: 7ce6c5f90758f9c208bc192ee1a7a423cb1f3de456ad9534bfdff646440b8bfa
+
+build:
+  merge_build_host: True  # [win]
+  
+  number: 0
+
+  rpaths:
+    - lib/R/lib/
+    - lib/
+
+requirements:
+  build:
+    - {{posix}}zip               # [win]
+
+  host:
+    - r-base
+
+  run:
+    - r-base
+
+test:
+  commands:
+
+    - $R -e "library('gPCA')"           # [not win]
+    - "\"%R%\" -e \"library('gPCA')\""  # [win]
+
+about:
+  home: https://CRAN.R-project.org/package=gPCA
+  license: GPL (>= 2)
+  summary: This package implements guided principal components analysis for the detection of
+    batch effects in high-throughput data.
+  license_family: GPL3
+
+