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meta.yaml
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meta.yaml
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{% set name="trycycler" %}
{% set version="0.5.5" %}
package:
name: {{ name }}
version: {{ version }}
build:
noarch: python
number: 1
script: {{ PYTHON }} -m pip install --no-deps --ignore-installed .
run_exports:
- {{ pin_subpackage('trycycler', max_pin="x.x") }}
source:
url: https://github.com/rrwick/{{ name }}/archive/v{{ version }}.tar.gz
sha256: 5794a4520c3b8673adc69c975cee06d7658cd74ac6d9378d1fc7af860bec1a89
requirements:
host:
- python >=3.6,<3.11
- pip
- setuptools
run:
- python >=3.6,<3.11
- python-edlib
- setuptools
- scipy
- numpy
- pillow
- miniasm
- minimap2
- mash
- muscle <4
- r-base
- r-ape
- r-phangorn
test:
commands:
- trycycler --version
- trycycler subsample --help
- trycycler cluster --help
- trycycler dotplot --help
- trycycler reconcile --help
- trycycler msa --help
- trycycler partition --help
- trycycler consensus --help
about:
home: https://github.com/rrwick/Trycycler
license: 'GPLv3'
license_file: LICENSE
summary: 'Trycycler is a tool for generating consensus long-read assemblies for bacterial genomes'
extra:
recipe-maintainers:
- thanhleviet
- galladoalba