meta.yaml

{% set name = "chiron" %}
{% set version = "0.6.1.1" %}

package:
  name: "{{ name|lower }}"
  version: "{{ version }}"

source:
  url: https://pypi.io/packages/source/{{ name[0] }}/{{ name }}/{{ name }}-{{ version }}.tar.gz
  sha256: 00ff065d0fe237397a9fe40998bf6ac85f4f50c0fa92322f5e44f7694854df1b

build:
  number: 0
  noarch: python
  entry_points:
    - chiron=chiron.entry:main
  script: "{{ PYTHON }} -m pip install . --no-deps --ignore-installed -vvv "

requirements:
  host:
    - pip
    - python 2.7
  run:
    - h5py >=2.7.0
    - mappy >=2.10.0
    - numpy >=1.13.3
    - python 2.7
    - statsmodels >=0.8.0
    - tqdm >=4.23.0
    - tensorflow >=1.3.0

about:
  home: https://github.com/haotianteng/chiron
  license: Mozilla Public License 2.0 (MPL 2.0)
  license_family: OTHER
  summary: 'A deep neural network basecaller for nanopore sequencing.'

extra:
  identifiers:
    - doi:10.1093/gigascience/giy037
    - biotools:Chiron
  skip-lints:
    - missing_tests  # conda-forge::tensorflow requires GLIBC >=2.16
                     # See https://github.com/conda-forge/tensorflow-feedstock/issues/67
  notes: conda-forge::tensorflow requires GLIBC >=2.16. It should be present on most, but not all systems. See https://github.com/conda-forge/tensorflow-feedstock/issues/67