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I think the last line in
def __init__(self, hdp, assembly_name): self.hdp = hdp self.hn = hgvs.normalizer.Normalizer(hdp, cross_boundaries=False, shuffle_direction=5, validate=False) self.ac_to_chr_name_map = { sr["refseq_ac"]: sr["name"] for sr in bioutils.assemblies.get_assembly("GRCh38")["sequences"]}
should be
for sr in bioutils.assemblies.get_assembly(assembly_name)["sequences"]}
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I think the last line in
should be
for sr in bioutils.assemblies.get_assembly(assembly_name)["sequences"]}
The text was updated successfully, but these errors were encountered: