You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Is your feature request related to a problem? Please describe.
In config.yaml, all steps look for files that were produced in the previous step, except for ngs_mapping, which requires an absolute path. If one is editing an old config.yaml for different datasets, and doesn't see this because the path is not in static_data_config or data_sets, it can cause problems.
Describe the solution you'd like
Is it possible to use a relative path instead of an absolute one?
The text was updated successfully, but these errors were encountered:
Is your feature request related to a problem? Please describe.
In config.yaml, all steps look for files that were produced in the previous step, except for ngs_mapping, which requires an absolute path. If one is editing an old config.yaml for different datasets, and doesn't see this because the path is not in static_data_config or data_sets, it can cause problems.
Describe the solution you'd like
Is it possible to use a relative path instead of an absolute one?
The text was updated successfully, but these errors were encountered: