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source('board.dataview/R/dataview_table_samples.R',encoding='UTF-8') + source('board.dataview/R/dataview_ui.R',encoding='UTF-8') + source('board.drugconnectivity/R/drugconnectivity_plot_actmap.R',encoding='UTF-8') + source('board.drugconnectivity/R/drugconnectivity_plot_cmap_dsea.R',encoding='UTF-8') + source('board.drugconnectivity/R/drugconnectivity_plot_cmap_enplot.R',encoding='UTF-8') + source('board.drugconnectivity/R/drugconnectivity_plot_enplots.R',encoding='UTF-8') + source('board.drugconnectivity/R/drugconnectivity_plot_moa.R',encoding='UTF-8') + source('board.drugconnectivity/R/drugconnectivity_server.R',encoding='UTF-8') + source('board.drugconnectivity/R/drugconnectivity_table_cmap.R',encoding='UTF-8') + source('board.drugconnectivity/R/drugconnectivity_table_dsea.R',encoding='UTF-8') + source('board.drugconnectivity/R/drugconnectivity_ui.R',encoding='UTF-8') + source('board.enrichment/R/enrichment_plot_barplot.R',encoding='UTF-8') + source('board.enrichment/R/enrichment_plot_compare.R',encoding='UTF-8') + source('board.enrichment/R/enrichment_plot_freq_top_gsets.R',encoding='UTF-8') + source('board.enrichment/R/enrichment_plot_geneplot.R',encoding='UTF-8') + source('board.enrichment/R/enrichment_plot_scatter.R',encoding='UTF-8') + source('board.enrichment/R/enrichment_plot_top_enrich_gsets.R',encoding='UTF-8') + source('board.enrichment/R/enrichment_plot_volcano.R',encoding='UTF-8') + source('board.enrichment/R/enrichment_plot_volcanoall.R',encoding='UTF-8') + source('board.enrichment/R/enrichment_plot_volcanomethods.R',encoding='UTF-8') + source('board.enrichment/R/enrichment_server.R',encoding='UTF-8') + source('board.enrichment/R/enrichment_table_enrichment_analysis.R',encoding='UTF-8') + source('board.enrichment/R/enrichment_table_genes_in_geneset_ui.R',encoding='UTF-8') + source('board.enrichment/R/enrichment_table_gset_enrich_all_contrasts.R',encoding='UTF-8') + source('board.enrichment/R/enrichment_table_n_sig_gsets.R',encoding='UTF-8') + source('board.enrichment/R/enrichment_ui.R',encoding='UTF-8') + source('board.expression/R/expression_plot_barplot.R',encoding='UTF-8') + source('board.expression/R/expression_plot_maplot.R',encoding='UTF-8') + source('board.expression/R/expression_plot_topfoldchange.R',encoding='UTF-8') + source('board.expression/R/expression_plot_topgenes.R',encoding='UTF-8') + source('board.expression/R/expression_plot_volcano.R',encoding='UTF-8') + source('board.expression/R/expression_plot_volcanoAll.R',encoding='UTF-8') + source('board.expression/R/expression_plot_volcanoMethods.R',encoding='UTF-8') + source('board.expression/R/expression_server.R',encoding='UTF-8') + source('board.expression/R/expression_table_fctable.R',encoding='UTF-8') + source('board.expression/R/expression_table_FDRtable.R',encoding='UTF-8') + source('board.expression/R/expression_table_genetable.R',encoding='UTF-8') + source('board.expression/R/expression_table_gsettable.R',encoding='UTF-8') + source('board.expression/R/expression_ui.R',encoding='UTF-8') + source('board.featuremap/R/featuremap_plot_gene_sig.R',encoding='UTF-8') + source('board.featuremap/R/featuremap_plot_gset_sig.R',encoding='UTF-8') + source('board.featuremap/R/featuremap_plot_table_gene_map.R',encoding='UTF-8') + source('board.featuremap/R/featuremap_plot_table_geneset_map.R',encoding='UTF-8') + source('board.featuremap/R/featuremap_server.R',encoding='UTF-8') + source('board.featuremap/R/featuremap_ui.R',encoding='UTF-8') + source('board.intersection/R/intersection_plot_contrast_correlation.R',encoding='UTF-8') + source('board.intersection/R/intersection_plot_foldchange_heatmap.R',encoding='UTF-8') + source('board.intersection/R/intersection_plot_scatterplot_pairs.R',encoding='UTF-8') + source('board.intersection/R/intersection_plot_table_venn_diagram.R',encoding='UTF-8') + source('board.intersection/R/intersection_server.R',encoding='UTF-8') + source('board.intersection/R/intersection_ui.R',encoding='UTF-8') + source('board.loading/R/loading_module_received.R',encoding='UTF-8') + source('board.loading/R/loading_module_shared.R',encoding='UTF-8') + source('board.loading/R/loading_server.R',encoding='UTF-8') + source('board.loading/R/loading_table_datasets_public.R',encoding='UTF-8') + source('board.loading/R/loading_table_datasets.R',encoding='UTF-8') + source('board.loading/R/loading_tsneplot.R',encoding='UTF-8') + source('board.loading/R/loading_ui.R',encoding='UTF-8') + source('board.loading/R/loading_utils.R',encoding='UTF-8') + source('board.pathway/R/pathway_enrichmap.R',encoding='UTF-8') + source('board.pathway/R/pathway_plot_enrichmap.R',encoding='UTF-8') + source('board.pathway/R/pathway_plot_go_actmap.R',encoding='UTF-8') + source('board.pathway/R/pathway_plot_go_network.R',encoding='UTF-8') + source('board.pathway/R/pathway_plot_reactome_actmap.R',encoding='UTF-8') + source('board.pathway/R/pathway_plot_reactome_graph.R',encoding='UTF-8') + source('board.pathway/R/pathway_plot_wikipathway_actmap.R',encoding='UTF-8') + source('board.pathway/R/pathway_plot_wikipathway_graph.R',encoding='UTF-8') + source('board.pathway/R/pathway_server.R',encoding='UTF-8') + source('board.pathway/R/pathway_table_go_table.R',encoding='UTF-8') + source('board.pathway/R/pathway_table_reactome.R',encoding='UTF-8') + source('board.pathway/R/pathway_table_wikipathway.R',encoding='UTF-8') + source('board.pathway/R/pathway_ui.R',encoding='UTF-8') + source('board.pathway/R/pathway_wikipathview.R',encoding='UTF-8') + source('board.pcsf/R/pcsf_plot_heatmap.R',encoding='UTF-8') + source('board.pcsf/R/pcsf_plot_network.R',encoding='UTF-8') + source('board.pcsf/R/pcsf_server.R',encoding='UTF-8') + source('board.pcsf/R/pcsf_ui.R',encoding='UTF-8') + source('board.pcsf/R/util_pcsf.R',encoding='UTF-8') + source('board.signature/R/signature_plot_enplots.R',encoding='UTF-8') + source('board.signature/R/signature_plot_markers.R',encoding='UTF-8') + source('board.signature/R/signature_plot_overlap.R',encoding='UTF-8') + source('board.signature/R/signature_plot_volcano.R',encoding='UTF-8') + source('board.signature/R/signature_server.R',encoding='UTF-8') + source('board.signature/R/signature_table_enrich_by_contrasts.R',encoding='UTF-8') + source('board.signature/R/signature_table_genes_in_signature.R',encoding='UTF-8') + source('board.signature/R/signature_table_overlap.R',encoding='UTF-8') + source('board.signature/R/signature_ui.R',encoding='UTF-8') + source('board.singlecell/R/singlecell_plot_crosstabPlot.R',encoding='UTF-8') + source('board.singlecell/R/singlecell_plot_cytoplot.R',encoding='UTF-8') + source('board.singlecell/R/singlecell_plot_icpplot.R',encoding='UTF-8') + source('board.singlecell/R/singlecell_plot_mappingplot.R',encoding='UTF-8') + source('board.singlecell/R/singlecell_plot_markersplot.R',encoding='UTF-8') + source('board.singlecell/R/singlecell_plot_phenoplot.R',encoding='UTF-8') + source('board.singlecell/R/singlecell_server.R',encoding='UTF-8') + source('board.singlecell/R/singlecell_ui.R',encoding='UTF-8') + source('board.tcga/R/tcga_plot_survival.R',encoding='UTF-8') + source('board.tcga/R/tcga_server.R',encoding='UTF-8') + source('board.tcga/R/tcga_ui.R',encoding='UTF-8') + source('board.upload/R/upload_module_batchcorrect.R',encoding='UTF-8') + source('board.upload/R/upload_module_computepgx.R',encoding='UTF-8') + source('board.upload/R/upload_module_makecontrast.R',encoding='UTF-8') + source('board.upload/R/upload_module_outliers.R',encoding='UTF-8') + source('board.upload/R/upload_module_preview.R',encoding='UTF-8') + source('board.upload/R/upload_plot_contraststats.R',encoding='UTF-8') + source('board.upload/R/upload_plot_countstats.R',encoding='UTF-8') + source('board.upload/R/upload_plot_pcaplot.R',encoding='UTF-8') + source('board.upload/R/upload_plot_phenostats.R',encoding='UTF-8') + source('board.upload/R/upload_server.R',encoding='UTF-8') + source('board.upload/R/upload_ui.R',encoding='UTF-8') + source('board.upload/R/upload_utils.R',encoding='UTF-8') + source('board.user/R/user_table_resources.R',encoding='UTF-8') + source('board.user/R/userprofile_server.R',encoding='UTF-8') + source('board.user/R/userprofile_ui.R',encoding='UTF-8') + source('board.user/R/usersettings_server.R',encoding='UTF-8') + source('board.user/R/usersettings_ui.R',encoding='UTF-8') + source('board.wgcna/R/wgcna_plot_correlation_network.R',encoding='UTF-8') + source('board.wgcna/R/wgcna_plot_eigengene_clustering.R',encoding='UTF-8') + source('board.wgcna/R/wgcna_plot_enrichment.R',encoding='UTF-8') + source('board.wgcna/R/wgcna_plot_gclustering.R',encoding='UTF-8') + source('board.wgcna/R/wgcna_plot_gdendogram.R',encoding='UTF-8') + source('board.wgcna/R/wgcna_plot_heatmap_membership.R',encoding='UTF-8') + source('board.wgcna/R/wgcna_plot_membership_v_trait.R',encoding='UTF-8') + source('board.wgcna/R/wgcna_plot_module_graph.R',encoding='UTF-8') + source('board.wgcna/R/wgcna_plot_module_membership.R',encoding='UTF-8') + source('board.wgcna/R/wgcna_plot_MTrelationships.R',encoding='UTF-8') + source('board.wgcna/R/wgcna_plot_s_independence.R',encoding='UTF-8') + source('board.wgcna/R/wgcna_plot_TOMheatmap.R',encoding='UTF-8') + source('board.wgcna/R/wgcna_server.R',encoding='UTF-8') + source('board.wgcna/R/wgcna_table_enrichment.R',encoding='UTF-8') + source('board.wgcna/R/wgcna_table_genes.R',encoding='UTF-8') + source('board.wgcna/R/wgcna_ui.R',encoding='UTF-8') + source('board.wordcloud/R/wordcloud_plot_enrichment.R',encoding='UTF-8') + source('board.wordcloud/R/wordcloud_plot_wordcloud.R',encoding='UTF-8') + source('board.wordcloud/R/wordcloud_plot_wordtsne.R',encoding='UTF-8') + source('board.wordcloud/R/wordcloud_server.R',encoding='UTF-8') + source('board.wordcloud/R/wordcloud_table_enrichment.R',encoding='UTF-8') + source('board.wordcloud/R/wordcloud_table_leading_edge.R',encoding='UTF-8') + source('board.wordcloud/R/wordcloud_ui.R',encoding='UTF-8') + source('modules/AuthenticationModule_functions.R',encoding='UTF-8') + source('modules/AuthenticationModule_ui.R',encoding='UTF-8') + source('modules/AuthenticationModule.R',encoding='UTF-8') + source('modules/CookiesModule.R',encoding='UTF-8') + source('modules/InfoModals.R',encoding='UTF-8') + source('modules/InviteFriend.R',encoding='UTF-8') + source('modules/NormalizeCountsModule.R',encoding='UTF-8') + source('modules/PlotDownloadLogger.R',encoding='UTF-8') + source('modules/QuestionModule.R',encoding='UTF-8') + source('modules/TimerModule.R',encoding='UTF-8') + source('modules/UserAccessControl.R',encoding='UTF-8') + source('modules/UserInactivityControl.R',encoding='UTF-8') + source('modules/UsersMapModule.R',encoding='UTF-8') + source('modules/WelcomeBoard.R',encoding='UTF-8') + source('ui/bs-components.R',encoding='UTF-8') + source('ui/ui-alerts.R',encoding='UTF-8') + source('ui/ui-bigdashplus.R',encoding='UTF-8') + source('ui/ui-boardHeader.R',encoding='UTF-8') + source('ui/ui-code.R',encoding='UTF-8') + source('ui/ui-colors.R',encoding='UTF-8') + source('ui/ui-defaults.R',encoding='UTF-8') + source('ui/ui-DropDownMenu.R',encoding='UTF-8') + source('ui/ui-links.R',encoding='UTF-8') + source('ui/ui-modalUI.R',encoding='UTF-8') + source('ui/ui-PlotModule.R',encoding='UTF-8') + source('ui/ui-startupModal.R',encoding='UTF-8') + source('ui/ui-TableModule2.R',encoding='UTF-8') + source('ui/ui-tooltip.R',encoding='UTF-8') + source('ui/ui-utils.R',encoding='UTF-8') + source('ui/ui-vizpanels.R',encoding='UTF-8') + message('done! (sourcing all code)') } diff --git a/components/modules/InviteFriend.R b/components/modules/InviteFriend.R index 47a90e6d8..e18c8ee23 100644 --- a/components/modules/InviteFriend.R +++ b/components/modules/InviteFriend.R @@ -79,20 +79,37 @@ InviteFriendModule <- function( return(NULL) } - if (friend_email == auth$email) { - shinyalert::shinyalert(text = "Meh. You cannot invite yourself...") - dbg("[observeInviteFriendButton] error: You cannot invite yourself") + own_email <- (friend_email == auth$email) + own_email <- agrep(gsub("[0-9.-]|@.*","",friend_email), gsub("[0-9.-]|@.*","",auth$email)) + if (own_email) { + shinyalert::shinyalert(text = "Meh. You cannot invite yourself... Or don't you have any friends?") + dbg("[observeInviteFriendButton] error: Referrer is inviting him/her self") return(NULL) } - already.registered <- list.dirs(PGX.DIR, full.names = FALSE, recursive = FALSE) - already.registered <- grep("@", already.registered, value = TRUE) - if (friend_email %in% already.registered) { + ## check already registered + already_registered <- list.dirs(PGX.DIR, full.names = FALSE, recursive = FALSE) + already_registered <- grep("@", already_registered, value = TRUE) + if (friend_email %in% already_registered) { shinyalert::shinyalert(text = "No need to invite! Your friend is already on Omics Playground") dbg("[observeInviteFriendButton] error: Already registered") return(NULL) } - + + ## check already invited + invite_file2 <- file.path(auth$user_dir, "INVITES.log") + if(!is.null(invite_file2) && file.exists(invite_file2)) { + invite_list <- data.table::fread( invite_file2 ) + colnames(invite_list) <- c("time","from","to") + already_invited <- sum(invite_list$to == friend_email & invite_list$from == auth$email) + dbg("[InviteFriendModule] input$invite : already_invited = ",already_invited) + if (already_invited > 3) { + shinyalert::shinyalert(text = "You have already invited your friend to Omics Playground!") + dbg("[observeInviteFriendButton] error: Already invited") + return(NULL) + } + } + ## Send email user_name <- auth$username user_email <- auth$email @@ -116,9 +133,9 @@ InviteFriendModule <- function( invite.file2 <- file.path(auth$user_dir, "INVITES.log") do.append <- file.exists(invite.file) timestamp <- as.character(Sys.time()) - invite_data <- list(timestamp, user_email, friend_email) - data.table::fwrite(invite_data, file = invite.file, quote = TRUE, append = do.append) - data.table::fwrite(invite_data, file = invite.file2, quote = TRUE, append = do.append) + invite_list <- list(timestamp, user_email, friend_email) + data.table::fwrite(invite_list, file = invite.file, quote = TRUE, append = do.append) + data.table::fwrite(invite_list, file = invite.file2, quote = TRUE, append = do.append) ## send confirmation sendConfirmationEmail(user_email, user_name, friend_email, diff --git a/components/ui/ui-startupModal.R b/components/ui/ui-startupModal.R index e819ebc03..f8b74c9be 100644 --- a/components/ui/ui-startupModal.R +++ b/components/ui/ui-startupModal.R @@ -34,7 +34,7 @@ ui.startupModal <- function(id, messages, title = NULL) { bsutils::modalHeader( ## bsutils::modalTitle(title), bsutils::modalTitle(""), - style = "background-color: #f0f9fd; margin-bottom: -30px;" + style = "background-color: #f0f9fd; margin-bottom: -10px;" ), do.call( function(...) { diff --git a/etc/MESSAGES b/etc/MESSAGES index e2cb4b74c..843a41c24 100644 --- a/etc/MESSAGES +++ b/etc/MESSAGES @@ -1,6 +1,6 @@ ## New features in V3!.Read more here

  -Fancy a cool BigOmics T-shirt? ::: Invite your friends to Omics Playground and earn some exclusive BigOmics swag. Find out how and check out the details here

+Fancy a cool BigOmics T-shirt? ::: Invite your friends to Omics Playground and earn some exclusive BigOmics swag. Find out how and check out the details here

Omics Playground V3 ::: A fresh look and exciting new features. New pathways, feature UMAPs, PCSF, data sharing and custom genesets. Read about our new features here